ATF1 (activating transcription factor 1)

symbol:
ATF1
locus group:
protein-coding gene
location:
12q13.12
gene_family:
Basic leucine zipper proteins
alias symbol:
TREB36
alias name:
None
entrez id:
466
ensembl gene id:
ENSG00000123268
ucsc gene id:
uc001rww.5
refseq accession:
NM_005171
hgnc_id:
HGNC:783
approved reserved:
1994-03-16
12q13.12
基因染色体位置图

ATF1(激活转录因子1)属于ATF/CREB转录因子家族,该家族成员均含有碱性亮氨酸拉链(bZIP)结构域,能够识别并结合DNA上的cAMP反应元件(CRE),调控下游基因的转录。ATF1广泛表达于多种组织,尤其在神经系统和内分泌系统中发挥重要作用。它参与细胞增殖、分化、凋亡以及应激反应(如氧化应激和DNA损伤修复)等关键生物学过程。ATF1通常与CREB(cAMP反应元件结合蛋白)形成二聚体,共同调节靶基因表达,其活性受磷酸化调控(如PKA、MAPK等激酶)。突变或异常表达可能导致功能紊乱,例如某些癌症(如黑色素瘤、滑膜肉瘤)中可见ATF1基因易位(如EWSR1-ATF1融合基因),促进肿瘤发生。过表达ATF1可能增强细胞存活和抗凋亡能力,但也会因过度激活增殖信号通路而致癌;低表达则可能削弱应激应答,导致细胞易受损伤。此外,ATF1与神经退行性疾病(如阿尔茨海默病)相关,其表达下降可能影响突触可塑性相关基因的转录。ATF/CREB家族的共性包括依赖cAMP信号通路、通过bZIP结构域形成同源或异源二聚体,并广泛参与代谢、免疫和昼夜节律等生理过程的调控。

This gene encodes an activating transcription factor, which belongs to the ATF subfamily and bZIP (basic-region leucine zipper) family. It influences cellular physiologic processes by regulating the expression of downstream target genes, which are related to growth, survival, and other cellular activities. This protein is phosphorylated at serine 63 in its kinase-inducible domain by serine/threonine kinases, cAMP-dependent protein kinase A, calmodulin-dependent protein kinase I/II, mitogen- and stress-activated protein kinase and cyclin-dependent kinase 3 (cdk-3). Its phosphorylation enhances its transactivation and transcriptional activities, and enhances cell transformation. Fusion of this gene and FUS on chromosome 16 or EWSR1 on chromosome 22 induced by translocation generates chimeric proteins in angiomatoid fibrous histiocytoma and clear cell sarcoma. This gene has a pseudogene on chromosome 6. [provided by RefSeq, Aug 2010]

此基因编码一种活化转录因子,其属于ATF亚科和的bZIP(基本区域亮氨酸拉链)家族。它通过调节下游靶基因,这是有关生长,存活,和其他细胞活动的表达影响细胞生理过程。这种蛋白是在丝氨酸63在由丝氨酸/苏氨酸激酶,cAMP-依赖性蛋白激酶A,钙调蛋白依赖性蛋白激酶I / II,促分裂原和应激活化的蛋白激酶和细胞周期蛋白依赖性激酶3(其激酶诱导域磷酸化CDK-3)。其磷酸化增强其转录和转录活性,以及??增强细胞转化。这种基因和FUS对由易位染色体诱导染色体22 16或EWSR1融合生成血管瘤样纤维组织细胞瘤和透明细胞肉瘤嵌合蛋白。该基因[由RefSeq的,2010年8月提供]染色体6.假

ATF1基因的碱基序列:[NCBI]
Loading Gene Browser...
ATF1基因的碱基突变:           仅显示部分snp
rs829112       rs829113       rs829114       rs829115       rs829125       rs865489       rs865490       rs1109726       rs1129406       rs1344958       rs1561422       rs1613835       rs1659387       rs2230674       rs2359188       rs2554862       rs3742065      

ATF1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AGAGTACCACGTCAGAGAC
58
AGAGTGAGACCCTGTTGAG
58
ATTCTTCAGTATGCACAGACC
58
TCCTGATGCAGTTTGTACG
57
ACAGTACATTGCCATTGCC
58
AATGTCTGAAGTCCCTGTACTC
59
GAGTACCACGTCAGAGACAG
59
CAGAGTGAGACCCTGTTGAG
59
AGTACCACGTCAGAGACAG
58
AGAGTGAGACCCTGTTGAG
58
CTATTCTTCAGTATGCACAGACC
59
CTGATGCAGTTTGTACGACC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
ATF1
BCL2
Unknown
ATF1
CCNA1
Repression
ATF1
CFTR
Activation
ATF1
CGA
Unknown
ATF1
CYP11B1
Unknown
ATF1
CYP11B2
Unknown
ATF1
ERBB2
Unknown
ATF1
FLT1
Unknown
ATF1
FTH1
Activation
ATF1
FTH1
Repression

ATF1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

ATF1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003700
F8VS03 (UniProtKB)
IEA
GO:0005654
F8VS03 (UniProtKB)
IDA
GO:0006357
F8VS03 (UniProtKB)
IEA
GO:0043565
F8VS03 (UniProtKB)
IEA
GO:0046982
F8VS03 (UniProtKB)
IEA
GO:0003700
F8VYN3 (UniProtKB)
IEA
GO:0005654
F8VYN3 (UniProtKB)
IDA
GO:0006357
F8VYN3 (UniProtKB)
IEA
GO:0043565
F8VYN3 (UniProtKB)
IEA
GO:0046982
F8VYN3 (UniProtKB)
IEA
GO:0000977
P18846 (UniProtKB)
IDA
GO:0001228
P18846 (UniProtKB)
IDA
GO:0003700
P18846 (UniProtKB)
TAS
GO:0003700
P18846 (UniProtKB)
TAS
GO:0003705
P18846 (UniProtKB)
IEA
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005515
P18846 (UniProtKB)
IPI
GO:0005634
P18846 (UniProtKB)
IDA
GO:0005654
P18846 (UniProtKB)
IDA
GO:0005654
P18846 (UniProtKB)
TAS
GO:0006366
P18846 (UniProtKB)
IEA
GO:0010976
P18846 (UniProtKB)
IEA
GO:0014070
P18846 (UniProtKB)
IEA
GO:0032025
P18846 (UniProtKB)
IEA
GO:0032403
P18846 (UniProtKB)
IEA
GO:0043623
P18846 (UniProtKB)
IEA
GO:0045740
P18846 (UniProtKB)
IEA
GO:0045944
P18846 (UniProtKB)
IDA
GO:0046982
P18846 (UniProtKB)
IEA
GO:1990590
P18846 (UniProtKB)
IDA

可能调控 ATF1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Polycystic Ovary Syndrome 0.12 1 0 CTD_human
Sudden Cardiac Arrest 0.12 1 1 GWASCAT
Polycystic Kidney Diseases 0.08 1 0 RGD
Sarcoma, Clear Cell 0.013310583 40 0 BeFree_LHGDN
Malignant neoplasm of breast 0.004734064 2 0 GAD
melanoma 0.004614512 17 0 BeFree
Sarcoma 0.00408156 6 0 BeFree_LHGDN
Histiocytoma, Angiomatoid Fibrous 0.002985861 11 0 BeFree
Mammary Neoplasms 0.00272435 1 0 LHGDN
Sudden Cardiac Death 0.002367032 1 1 GAD

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