DFFB (DNA fragmentation factor subunit beta)

symbol:
DFFB
locus group:
protein-coding gene
location:
1p36.32
gene_family:
alias symbol:
CAD|CPAN|DFF-40|DFF40
alias name:
caspase-activated DNase
entrez id:
1677
ensembl gene id:
ENSG00000169598
ucsc gene id:
uc001alc.5
refseq accession:
NM_001282669
hgnc_id:
HGNC:2773
approved reserved:
1997-10-27
1p36.32
基因染色体位置图

DFFB(DNA fragmentation factor subunit beta)是DNA断裂因子(DFF)复合物的一个关键亚基,与DFFA(DNA fragmentation factor subunit alpha)共同组成DFF复合物,也被称为caspase激活的DNA酶(CAD)及其抑制剂(ICAD)。DFFB的主要功能是在细胞凋亡过程中执行DNA的片段化,这是凋亡的典型特征之一。当细胞接收到凋亡信号时,caspase-3或caspase-7会切割DFFA,释放DFFB的活性形式,使其能够进入细胞核并切割DNA,形成特征性的DNA梯状条带。DFFB的作用位点主要在细胞核内,其活性依赖于二价阳离子如Mg2+或Ca2+。DFFB的突变可能导致其无法被正常激活或丧失DNA酶活性,从而影响凋亡过程中的DNA断裂,可能导致凋亡异常,与某些癌症或神经退行性疾病的发病机制相关。DFFB的过表达可能加速凋亡过程,导致组织损伤或发育异常,而降低表达则可能抑制凋亡,增加细胞存活,与肿瘤的发生和化疗耐药性有关。DFFB属于DNA断裂因子家族,该家族的共性是通过调控DNA的断裂参与细胞凋亡,维持组织稳态。DFFB与DFFA的相互作用是该家族功能的核心,确保DNA断裂仅在凋亡时被精确激活。研究表明,DFFB的表达异常与多种疾病相关,包括癌症、自身免疫性疾病和神经退行性疾病,因此它可能成为治疗这些疾病的潜在靶点。

Apoptosis is a cell death process that removes toxic and/or useless cells during mammalian development. The apoptotic process is accompanied by shrinkage and fragmentation of the cells and nuclei and degradation of the chromosomal DNA into nucleosomal units. DNA fragmentation factor (DFF) is a heterodimeric protein of 40-kD (DFFB) and 45-kD (DFFA) subunits. DFFA is the substrate for caspase-3 and triggers DNA fragmentation during apoptosis. DFF becomes activated when DFFA is cleaved by caspase-3. The cleaved fragments of DFFA dissociate from DFFB, the active component of DFF. DFFB has been found to trigger both DNA fragmentation and chromatin condensation during apoptosis. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene but the biological validity of some of these variants has not been determined. [provided by RefSeq, Sep 2013]

细胞凋亡是细胞死亡的过程,哺乳动物发育过程中删除的毒性和/或无用的细胞。细胞凋亡过程伴随着细胞和细胞核和染色体DNA成核小体单位的降解的收??缩和碎片。 DNA片段化因子(DFF)为40-KD(DFFB)和45 kD的(DFFA)亚基的异源二聚体蛋白质。 DFFA为胱天蛋白酶3在基片和凋亡过程中触发DNA片段。当DFFA由caspase-3的裂解DFF被激活。 DFFA的切割片段从DFFB,DFF的活性成分分解。 DFFB已经发现细胞凋亡过程中,同时触发DNA片段化和染色质浓缩。已经发现编码不同同种型的可变剪接转录物变体对于该基因,但其中的一些变体的生物有效性尚未确定。 [由RefSeq的,2013年9月提供]

DFFB基因的碱基序列:[NCBI]
Loading Gene Browser...
DFFB基因的碱基突变:           仅显示部分snp
rs4376673       rs4564078       rs4648348       rs4648349       rs4648425       rs4648426       rs4648427       rs4648428       rs6424059       rs6424060       rs6667526       rs7533397       rs7542369       rs10909805       rs10909806       rs11554035       rs12126653      

DFFB基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GTGGTTTGAAGGCTTGGAG
59
CTCAGGTAACTCCGGATCC
59
GTTACCTGAGGGAGGTGAG
59
GCCATTGTACTGCATGGAC
59
GCTATGTGAGCGACATCAG
59
ACTCCAAGCCTTCAAACCA
60
CAGGATAGTCTCACACTCCTG
59
GTCGCTCACATCTGTAATCC
59
CTGACGGAAGATTACTTCCC
58
CTGATGTCGCTCACATCTC
58
CCAGGATAGTCTCACACTCC
59
TCGCTCACATCTGTAATCCC
60
GCTGACGGAAGATTACTTCC
59
TATCCTGGGAAACATGGCG
60
GCTGACGGAAGATTACTTCC
59
ATAAGCAGCTGTCCATCAC
58
GCTGACGGAAGATTACTTCC
59
CAGCAGAAGACACATCAGC
59
GTTACCTGAGGGAGGTGAG
59
GCCATTGTACTGCATGGAC
59
      尚未收录相关数据

DFFB基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

DFFB基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005622
A0A0B4J1S5 (UniProtKB)
IEA
GO:0006915
A0A0B4J1S5 (UniProtKB)
IEA
GO:0003677
B4DZS0 (UniProtKB)
IEA
GO:0004518
B4DZS0 (UniProtKB)
IEA
GO:0005634
B4DZS0 (UniProtKB)
IDA
GO:0005730
B4DZS0 (UniProtKB)
IDA
GO:0005737
B4DZS0 (UniProtKB)
IEA
GO:0006309
B4DZS0 (UniProtKB)
IEA
GO:0005622
G3XAD0 (UniProtKB)
IEA
GO:0006915
G3XAD0 (UniProtKB)
IEA
GO:0005634
J3KT26 (UniProtKB)
IEA
GO:0005737
J3KT26 (UniProtKB)
IEA
GO:0006309
J3KT26 (UniProtKB)
IEA
GO:0016787
J3KT26 (UniProtKB)
IEA
GO:0000790
O76075 (UniProtKB)
IDA
GO:0004536
O76075 (UniProtKB)
TAS
GO:0005634
O76075 (UniProtKB)
IDA
GO:0005634
O76075 (UniProtKB)
IDA
GO:0005634
O76075 (UniProtKB)
IDA
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005654
O76075 (UniProtKB)
TAS
GO:0005730
O76075 (UniProtKB)
IDA
GO:0005829
O76075 (UniProtKB)
IDA
GO:0005829
O76075 (UniProtKB)
TAS
GO:0005829
O76075 (UniProtKB)
TAS
GO:0005829
O76075 (UniProtKB)
TAS
GO:0006309
O76075 (UniProtKB)
IDA
GO:0006309
O76075 (UniProtKB)
TAS
GO:0019899
O76075 (UniProtKB)
IPI
GO:0030263
O76075 (UniProtKB)
IDA
GO:0005622
Q96P72 (UniProtKB)
IEA
GO:0006915
Q96P72 (UniProtKB)
IEA
GO:0005622
Q96P73 (UniProtKB)
IEA
GO:0006915
Q96P73 (UniProtKB)
IEA

可能调控 DFFB基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Transient Ischemic Attack 0.08 1 0 RGD
Liver carcinoma 0.005991584 2 0 BeFree_LHGDN
Coronary Arteriosclerosis 0.004614512 17 0 BeFree
Coronary heart disease 0.00434307 16 0 BeFree
Coronary Artery Disease 0.004071628 15 0 BeFree
oligodendroglioma 0.00272435 1 0 LHGDN
Epilepsy, Temporal Lobe 0.00272435 1 0 LHGDN
Lymphoma, Non-Hodgkin 0.002367032 1 0 GAD
Hypertensive disease 0.001900093 7 0 BeFree
Myocardial Infarction 0.001900093 7 0 BeFree

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