GPC6 (glypican 6)

symbol:
GPC6
locus group:
protein-coding gene
location:
13q31.3-q32.1
gene_family:
Glypicans
alias symbol:
None
alias name:
glypican proteoglycan 6
entrez id:
10082
ensembl gene id:
ENSG00000183098
ucsc gene id:
uc001vlt.4
refseq accession:
NM_005708
hgnc_id:
HGNC:4454
approved reserved:
1999-05-24
13q31.3-q32.1
基因染色体位置图

GPC6(Glypican-6)是磷脂酰肌醇蛋白聚糖(Glypican)基因家族的成员之一,该家族共有6个成员(GPC1-GPC6),均通过糖基磷脂酰肌醇(GPI)锚定在细胞膜上。GPC6编码一种细胞表面硫酸乙酰肝素蛋白聚糖(HSPG),通过调节多种生长因子(如Wnt、FGF和BMP)的信号传导参与细胞增殖、分化和组织发育。GPC6在骨骼发育中起关键作用,尤其在软骨形成和骨生长板调控中表现突出。GPC6基因突变或表达异常与多种疾病相关,如骨质疏松症、身材矮小和骨畸形(如奥利尔病)。GPC6过表达可能促进某些癌症(如肝癌和骨肉瘤)的进展,因其增强Wnt/β-catenin等促增殖信号通路;而GPC6表达降低则可能导致骨骼发育障碍或成骨不全。Glypican家族共性包括:均含保守的14个半胱氨酸残基形成二硫键核心结构,通过HSPG链与配体相互作用,并参与形态发生素(如Hedgehog)的浓度梯度形成。GPC6还通过调控BMP信号影响肾脏发育,其缺失可能导致先天性肾脏畸形。在神经系统中,GPC6可能影响突触可塑性,但与家族其他成员(如GPC1在神经再生中的作用)相比,其神经功能研究较少。GPC6的表达具有组织特异性,在胎儿期高表达于骨骼和肾脏,成人期表达水平较低,但在病理状态下可能重新激活。

The glypicans comprise a family of glycosylphosphatidylinositol-anchored heparan sulfate proteoglycans, and they have been implicated in the control of cell growth and cell division. The glypican encoded by this gene is a putative cell surface coreceptor for growth factors, extracellular matrix proteins, proteases and anti-proteases. [provided by RefSeq, Jan 2009]

的glypicans包括家庭糖基锚硫酸乙酰肝素蛋白多糖,他们已经在细胞生长和细胞分裂的控制牵连。由该基因编码的酰肌醇蛋白聚糖为生长因子,细胞外基质蛋白,蛋白酶和抗蛋白酶推定的细胞表面共受体。 [由RefSeq的,2009年1月提供]

GPC6基因的碱基序列:[NCBI]
Loading Gene Browser...
GPC6基因的碱基突变:           仅显示部分snp
rs494817       rs497636       rs497836       rs498632       rs523303       rs538397       rs540423       rs541134       rs543744       rs588792       rs589258       rs591981       rs603741       rs605033       rs618895       rs620287       rs685049      

GPC6基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CCCGATAGATGTCAAGATTTCTG
59
CCCTGAAAGACCTTTGCAG
59
CCCGATAGATGTCAAGATTTCTG
59
CCCTGAAAGACCTTTGCAG
59
CAGAGTGGAATCTGTTTATAGATGC
60
CTTGACATCTATCGGGTCCA
59
CAAAGCCAGATACTTGCCTG
59
GTGATGTCCACATCCACCT
59
CAGAGTGGAATCTGTTTATAGATGC
60
ACATCTATCGGGTCCATGAC
59
CAAAGCCAGATACTTGCCTG
59
GTGATGTCCACATCCACCT
59
GCAAAGCCAGATACTTGCC
60
TGATGTCCACATCCACCTC
59
CAGAGTGGAATCTGTTTATAGATGC
60
CATCTATCGGGTCCATGACC
60
GCAAAGCCAGATACTTGCC
60
TGATGTCCACATCCACCTC
59
      尚未收录相关数据

GPC6基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

GPC6基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005578
A0A087WT82 (UniProtKB)
IEA
GO:0005886
A0A087WT82 (UniProtKB)
IEA
GO:0031225
A0A087WT82 (UniProtKB)
IEA
GO:0043395
A0A087WT82 (UniProtKB)
IEA
GO:0001523
Q9Y625 (UniProtKB)
TAS
GO:0005578
Q9Y625 (UniProtKB)
IEA
GO:0005615
Q9Y625 (UniProtKB)
IEA
GO:0005634
Q9Y625 (UniProtKB)
IDA
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005796
Q9Y625 (UniProtKB)
TAS
GO:0005886
Q9Y625 (UniProtKB)
TAS
GO:0005886
Q9Y625 (UniProtKB)
TAS
GO:0005886
Q9Y625 (UniProtKB)
TAS
GO:0005886
Q9Y625 (UniProtKB)
TAS
GO:0005886
Q9Y625 (UniProtKB)
TAS
GO:0005886
Q9Y625 (UniProtKB)
TAS
GO:0005887
Q9Y625 (UniProtKB)
TAS
GO:0006024
Q9Y625 (UniProtKB)
TAS
GO:0006027
Q9Y625 (UniProtKB)
TAS
GO:0016477
Q9Y625 (UniProtKB)
IDA
GO:0030203
Q9Y625 (UniProtKB)
TAS
GO:0031225
Q9Y625 (UniProtKB)
IEA
GO:0043202
Q9Y625 (UniProtKB)
TAS
GO:0043202
Q9Y625 (UniProtKB)
TAS
GO:0043395
Q9Y625 (UniProtKB)
IEA
GO:0060071
Q9Y625 (UniProtKB)
IEA
GO:1904929
Q9Y625 (UniProtKB)
NAS

可能调控 GPC6基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Omodysplasia type 1 0.360814326 3 0 BeFree_CLINVAR_CTD_human_ORPHANET
NEUROTICISM 0.122638474 1 1 BeFree_GAD_GWASCAT
Obesity 0.122367032 2 2 GAD_GWASCAT
Attention deficit hyperactivity disorder 0.122367032 1 1 GAD_GWASCAT
Alzheimer's Disease 0.12 1 1 GWASCAT
Limb Deformities, Congenital 0.12 1 0 CTD_human
Craniofacial Abnormalities 0.12 1 0 CTD_human
Intervertebral Disc Degeneration 0.12 1 1 GWASCAT
Tobacco Use Disorder 0.002367032 1 0 GAD
Neurotic Disorders 0.002367032 1 1 GAD

联系方式

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