HLA-DOB (major histocompatibility complex, class II, DO beta)

symbol:
HLA-DOB
locus group:
protein-coding gene
location:
6p21.32
gene_family:
Histocompatibility complex|C1-set domain containing
alias symbol:
None
alias name:
None
entrez id:
3112
ensembl gene id:
ENSG00000241106
ucsc gene id:
uc011jsv.2
refseq accession:
NM_002120
hgnc_id:
HGNC:4937
approved reserved:
2001-06-22
6p21.32
基因染色体位置图

HLA-DOB是人类白细胞抗原(HLA)系统中的一个基因,属于HLA II类基因家族,该家族还包括HLA-DP、HLA-DQ和HLA-DR等基因。HLA II类基因家族的共性在于它们编码的蛋白质主要参与抗原呈递过程,帮助免疫系统识别外来病原体。HLA-DOB基因位于6号染色体上,编码β链蛋白,与HLA-DOα链结合形成HLA-DO异二聚体。HLA-DO并不直接参与抗原呈递,而是作为HLA-DM的调节因子,影响HLA-DM在抗原呈递细胞(如B细胞和树突状细胞)内促进HLA II类分子与抗原肽结合的功能。HLA-DOB的表达产物通过抑制HLA-DM的活性,间接调控抗原肽的装载过程,从而影响免疫应答的强度和特异性。HLA-DOB的突变可能导致其功能异常,进而影响HLA-DM的调节,最终干扰抗原呈递和免疫应答。这种功能紊乱可能与某些自身免疫性疾病(如类风湿性关节炎或系统性红斑狼疮)或免疫缺陷病的发生有关。HLA-DOB的过表达可能过度抑制HLA-DM,导致抗原呈递效率下降,削弱免疫系统对外来病原体的反应能力;而降低表达则可能使HLA-DM活性过高,导致过度免疫反应或自身免疫疾病的风险增加。HLA-DOB在免疫系统中的精细调控作用使其成为研究免疫相关疾病的重要靶点之一。

HLA-DOB belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DOA) and a beta chain (DOB), both anchored in the membrane. It is located in intracellular vesicles. DO suppresses peptide loading of MHC class II molecules by inhibiting HLA-DM. Class II molecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. [provided by RefSeq, Jul 2008]

HLA-DOB属于HLA II类β链旁系同源基??因。此Ⅱ类分子是选自由α(DOA)和一个β链(DOB),无论是在膜锚定的异源二聚体。它坐落在细胞内的囊泡。溶解氧通过抑制HLA-DM抑制MHC II类分子的肽负载。 (:B淋巴细胞,树突细胞,巨噬细胞,APC)II类分子在抗原呈递细胞中表达。的β链为约26-28 kDa和其基因含有6个外显子。外显子1编码前导肽,外显子2和3编码的两个细胞外结构域,外显子4编码的跨膜结构域和外显子5编码胞质尾区。 [由RefSeq的,2008年7月提供]

HLA-DOB基因的碱基序列:[NCBI]
Loading Gene Browser...
HLA-DOB基因的碱基突变:           仅显示部分snp
rs10364       rs10364       rs10364       rs11244       rs11244       rs11244       rs1383258       rs1383258       rs1383258       rs2061952       rs2061952       rs2061952       rs2070120       rs2070120       rs2070120       rs2070121       rs2070121      

HLA-DOB基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TTCCTTCTGGTGGGAATCG
59
GCTCTTGAGACCTCATTACCA
60
AAGAGGTGACAGTGTACCC
59
CAGTGCAGCAGATTATGCTG
60
TTCCTTCTGGTGGGAATCG
59
TCTTGAGACCTCATTACCAGAC
59
AAAGAGGTGACAGTGTACCC
59
AGTGCAGCAGATTATGCTG
58
AAGAGGTGACAGTGTACCC
59
CAGTGCAGCAGATTATGCT
58
AGGGCTCAGAAAGGATATGTG
60
TTAGCATGACTGAGGGAGC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
CIITA
HLA-DOB
Activation
CREB1
HLA-DOB
Unknown
POU2F2
HLA-DOB
Unknown
RFX1
HLA-DOB
Unknown
RFX5
HLA-DOB
Unknown
RFXANK
HLA-DOB
Unknown
RFXAP
HLA-DOB
Unknown

HLA-DOB基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HLA-DOB基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0006955
A0A140T935 (UniProtKB)
IEA
GO:0019882
A0A140T935 (UniProtKB)
IEA
GO:0042613
A0A140T935 (UniProtKB)
IEA
GO:0006955
A0A140T945 (UniProtKB)
IEA
GO:0019882
A0A140T945 (UniProtKB)
IEA
GO:0042613
A0A140T945 (UniProtKB)
IEA
GO:0006955
A0A140T9F2 (UniProtKB)
IEA
GO:0019882
A0A140T9F2 (UniProtKB)
IEA
GO:0042613
A0A140T9F2 (UniProtKB)
IEA
GO:0006955
A0A140T9L2 (UniProtKB)
IEA
GO:0019882
A0A140T9L2 (UniProtKB)
IEA
GO:0042613
A0A140T9L2 (UniProtKB)
IEA
GO:0006955
A0A140T9U5 (UniProtKB)
IEA
GO:0019882
A0A140T9U5 (UniProtKB)
IEA
GO:0042613
A0A140T9U5 (UniProtKB)
IEA
GO:0006955
A0A140T9Z3 (UniProtKB)
IEA
GO:0019882
A0A140T9Z3 (UniProtKB)
IEA
GO:0042613
A0A140T9Z3 (UniProtKB)
IEA
GO:0006955
A0A140TA22 (UniProtKB)
IEA
GO:0019882
A0A140TA22 (UniProtKB)
IEA
GO:0042613
A0A140TA22 (UniProtKB)
IEA
GO:0002504
H0Y4X4 (UniProtKB)
IEA
GO:0006955
H0Y4X4 (UniProtKB)
IEA
GO:0016021
H0Y4X4 (UniProtKB)
IEA
GO:0042613
H0Y4X4 (UniProtKB)
IEA
GO:0002587
P13765 (UniProtKB)
IDA
GO:0005764
P13765 (UniProtKB)
IDA
GO:0005765
P13765 (UniProtKB)
TAS
GO:0005765
P13765 (UniProtKB)
TAS
GO:0006955
P13765 (UniProtKB)
IEA
GO:0007165
P13765 (UniProtKB)
IEA
GO:0010008
P13765 (UniProtKB)
IEA
GO:0016021
P13765 (UniProtKB)
IEA
GO:0019886
P13765 (UniProtKB)
TAS
GO:0023026
P13765 (UniProtKB)
IDA
GO:0032395
P13765 (UniProtKB)
TAS
GO:0042613
P13765 (UniProtKB)
IDA

可能调控 HLA-DOB基因的相关microRNA:     

Reactome

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Leukemia, B-Cell 0.00272435 1 0 LHGDN
Autoimmune Diseases 0.00272435 1 0 LHGDN
Diabetes Mellitus, Insulin-Dependent 0.002638474 1 7 BeFree_GAD
Tobacco Use Disorder 0.002367032 1 0 GAD
Lupus Erythematosus, Systemic 0.002367032 1 0 GAD
Behcet Syndrome 0.002367032 1 1 GAD
Multiple Myeloma 0.000271442 1 0 BeFree
Mucocutaneous Lymph Node Syndrome 0.000271442 1 0 BeFree
Breast Carcinoma 0.000271442 1 0 BeFree
Hepatitis C 0.000271442 1 3 BeFree

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