HLA-DQB2 (major histocompatibility complex, class II, DQ beta 2)

symbol:
HLA-DQB2
locus group:
protein-coding gene
location:
6p21.32
gene_family:
Histocompatibility complex|C1-set domain containing
alias symbol:
None
alias name:
None
entrez id:
3120
ensembl gene id:
ENSG00000232629
ucsc gene id:
uc063zhn.1
refseq accession:
NM_001198858
hgnc_id:
HGNC:4945
approved reserved:
2001-06-22
6p21.32
基因染色体位置图

HLA-DQB2是人类白细胞抗原(HLA)基因家族中的一员,属于主要组织相容性复合体(MHC)II类基因。HLA基因家族在免疫系统中扮演关键角色,主要负责编码细胞表面的蛋白质,这些蛋白质能够识别并呈递外来抗原给T细胞,从而启动免疫应答。HLA-DQB2基因位于6号染色体上,与HLA-DQB1基因相邻,但它的功能与HQB1不同。HLA-DQB2被认为是一个假基因,即它虽然具有类似HLA-DQB1的结构,但由于突变导致其无法正常表达功能性蛋白。HLA-DQB2的突变可能包括插入、缺失或终止密码子的提前出现,这些突变使其无法参与抗原呈递过程。尽管HLA-DQB2本身不编码功能性蛋白,但它可能通过基因调控或其他机制影响邻近基因(如HLA-DQB1)的表达或功能。HLA-DQB2的过表达或降低表达对机体的直接影响尚不明确,因为它本身不产生功能性产物,但它的存在可能通过影响附近基因的调控区域或染色质结构间接影响免疫相关功能。HLA-DQB2所在的HLA基因家族具有高度多态性,这意味着不同个体之间的基因序列差异很大,这种多态性使得免疫系统能够识别更多种类的病原体。HLA基因家族的共性包括编码细胞表面蛋白、参与抗原呈递、调控免疫应答以及与多种自身免疫性疾病(如1型糖尿病、类风湿性关节炎和多发性硬化症)的易感性相关。虽然HLA-DQB2本身与疾病的直接关联尚未明确,但它的邻近基因HLA-DQB1已被广泛研究与多种自身免疫性疾病的关联。HLA-DQB2的研究可能有助于理解HLA区域的进化及其在免疫调控中的作用。

HLA-DQB2 belongs to the family of HLA class II beta chain paralogs. Class II molecules are heterodimers consisting of an alpha (DQA) and a beta chain (DQB), both anchored in the membrane. They play a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). Polymorphisms in the alpha and beta chains specify the peptide binding specificity, and typing for these polymorphisms is routinely done for bone marrow transplantation. However this gene, HLA-DQB2, is not routinely typed, as it is not thought to have an effect on transplantation. There is conflicting evidence in the literature and public sequence databases for the protein-coding capacity of HLA-DQB2. Because there is evidence of transcription and an intact ORF, HLA-DQB2 is represented in Entrez Gene and in RefSeq as a protein-coding locus. [provided by RefSeq, Oct 2010]

None

HLA-DQB2基因的碱基序列:[NCBI]
Loading Gene Browser...
HLA-DQB2基因的碱基突变:           仅显示部分snp
rs3656       rs3656       rs3656       rs3656       rs3656       rs3656       rs3656       rs3656       rs762815       rs762815       rs762815       rs762815       rs762815       rs762815       rs762815       rs762815       rs1023448      

HLA-DQB2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CTTTCCCAAGGATTTCTTGGTC
60
TAGATGTATCTGGCCACACC
59
CTTTCCCAAGGATTTCTTGGTC
60
TAGATGTATCTGGCCACACC
59
CTTTCCCAAGGATTTCTTGGTC
60
TAGATGTATCTGGCCACACC
59
CAGAGCAAGATGCTGAGTG
59
CTCGAGGTCCTTTCTGACC
60
CAGAGCAAGATGCTGAGTG
59
CTCGAGGTCCTTTCTGACC
60
CTTTCCCAAGGATTTCTTGGT
59
AGATGTATCTGGCCACACC
59
CTTTCCCAAGGATTTCTTGGT
59
AGATGTATCTGGCCACACC
59
AGAGCAAGATGCTGAGTGG
60
CCTCGAGGTCCTTTCTGAC
60
AGAGCAAGATGCTGAGTGG
60
CCTCGAGGTCCTTTCTGAC
60
CTTTCCCAAGGATTTCTTGGT
59
AGATGTATCTGGCCACACC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
RFX5
HLA-DQB2
Unknown
RFXANK
HLA-DQB2
Unknown
RFXAP
HLA-DQB2
Unknown

HLA-DQB2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HLA-DQB2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0002504
A0A0G2JH31 (UniProtKB)
IEA
GO:0006955
A0A0G2JH31 (UniProtKB)
IEA
GO:0016021
A0A0G2JH31 (UniProtKB)
IEA
GO:0042613
A0A0G2JH31 (UniProtKB)
IEA
GO:0006955
A0A140T999 (UniProtKB)
IEA
GO:0019882
A0A140T999 (UniProtKB)
IEA
GO:0042613
A0A140T999 (UniProtKB)
IEA
GO:0006955
A0A140T9B0 (UniProtKB)
IEA
GO:0019882
A0A140T9B0 (UniProtKB)
IEA
GO:0042613
A0A140T9B0 (UniProtKB)
IEA
GO:0006955
A0A140T9F0 (UniProtKB)
IEA
GO:0019882
A0A140T9F0 (UniProtKB)
IEA
GO:0042613
A0A140T9F0 (UniProtKB)
IEA
GO:0006955
A0A140T9H0 (UniProtKB)
IEA
GO:0019882
A0A140T9H0 (UniProtKB)
IEA
GO:0042613
A0A140T9H0 (UniProtKB)
IEA
GO:0006955
A0A140T9J1 (UniProtKB)
IEA
GO:0019882
A0A140T9J1 (UniProtKB)
IEA
GO:0042613
A0A140T9J1 (UniProtKB)
IEA
GO:0006955
A0A140T9S2 (UniProtKB)
IEA
GO:0019882
A0A140T9S2 (UniProtKB)
IEA
GO:0042613
A0A140T9S2 (UniProtKB)
IEA
GO:0006955
A0A140T9U9 (UniProtKB)
IEA
GO:0019882
A0A140T9U9 (UniProtKB)
IEA
GO:0042613
A0A140T9U9 (UniProtKB)
IEA
GO:0002504
A2ADX3 (UniProtKB)
IEA
GO:0006955
A2ADX3 (UniProtKB)
IEA
GO:0016021
A2ADX3 (UniProtKB)
IEA
GO:0042613
A2ADX3 (UniProtKB)
IEA
GO:0002504
H0Y7Y7 (UniProtKB)
IEA
GO:0006955
H0Y7Y7 (UniProtKB)
IEA
GO:0016021
H0Y7Y7 (UniProtKB)
IEA
GO:0042613
H0Y7Y7 (UniProtKB)
IEA
GO:0000139
P05538 (UniProtKB)
TAS
GO:0000139
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005765
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0005886
P05538 (UniProtKB)
TAS
GO:0006955
P05538 (UniProtKB)
NAS
GO:0010008
P05538 (UniProtKB)
IEA
GO:0012507
P05538 (UniProtKB)
TAS
GO:0012507
P05538 (UniProtKB)
TAS
GO:0019886
P05538 (UniProtKB)
TAS
GO:0030658
P05538 (UniProtKB)
TAS
GO:0030658
P05538 (UniProtKB)
TAS
GO:0030666
P05538 (UniProtKB)
TAS
GO:0030666
P05538 (UniProtKB)
TAS
GO:0030669
P05538 (UniProtKB)
TAS
GO:0030669
P05538 (UniProtKB)
TAS
GO:0031295
P05538 (UniProtKB)
TAS
GO:0032395
P05538 (UniProtKB)
NAS
GO:0032588
P05538 (UniProtKB)
TAS
GO:0032588
P05538 (UniProtKB)
TAS
GO:0032588
P05538 (UniProtKB)
TAS
GO:0032588
P05538 (UniProtKB)
TAS
GO:0032588
P05538 (UniProtKB)
TAS
GO:0042613
P05538 (UniProtKB)
NAS
GO:0050852
P05538 (UniProtKB)
TAS
GO:0060333
P05538 (UniProtKB)
TAS
GO:0071556
P05538 (UniProtKB)
TAS
GO:0071556
P05538 (UniProtKB)
TAS
GO:0071556
P05538 (UniProtKB)
TAS
GO:0071556
P05538 (UniProtKB)
TAS
GO:0002504
Q5SQ91 (UniProtKB)
IEA
GO:0006955
Q5SQ91 (UniProtKB)
IEA
GO:0016021
Q5SQ91 (UniProtKB)
IEA
GO:0042613
Q5SQ91 (UniProtKB)
IEA
GO:0002504
Q5SR05 (UniProtKB)
IEA
GO:0006955
Q5SR05 (UniProtKB)
IEA
GO:0016021
Q5SR05 (UniProtKB)
IEA
GO:0042613
Q5SR05 (UniProtKB)
IEA

可能调控 HLA-DQB2基因的相关microRNA:     

Reactome

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Lupus Erythematosus, Systemic 0.125081451 13 2 BeFree_GAD_GWASCAT
Hepatitis B, Chronic 0.121085767 7 2 BeFree_GWASCAT
Diabetes Mellitus, Insulin-Dependent 0.029587164 109 2 BeFree
Narcolepsy 0.008414698 31 0 BeFree
Diabetes Mellitus 0.007600372 28 0 BeFree
Diabetes 0.007057489 26 0 BeFree
Celiac Disease 0.005428837 20 0 BeFree
Rheumatoid Arthritis 0.004810009 10 0 BeFree_GAD
Systemic Scleroderma 0.003528744 13 0 BeFree
Cataplexy 0.003528744 13 0 BeFree

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