HSPG2 (heparan sulfate proteoglycan 2)

symbol:
HSPG2
locus group:
protein-coding gene
location:
1p36.12
gene_family:
Proteoglycans - ungrouped|I-set domain containing|Immunoglobulin-like domain containing
alias symbol:
perlecan|PRCAN
alias name:
perlecan proteoglycan|endorepellin
entrez id:
3339
ensembl gene id:
ENSG00000142798
ucsc gene id:
uc001bfj.4
refseq accession:
NM_005529
hgnc_id:
HGNC:5273
approved reserved:
1991-02-27
1p36.12
基因染色体位置图

HSPG2基因编码基底膜蛋白聚糖(perlecan),这是一种大型硫酸乙酰肝素蛋白聚糖,广泛存在于细胞外基质和基底膜中。基底膜蛋白聚糖由五个结构域组成,具有多种生物学功能,包括维持组织结构完整性、调节细胞粘附和迁移、参与生长因子信号传导以及调控血管生成等。它通过与多种细胞外基质成分(如胶原、层粘连蛋白)和生长因子(如FGF、VEGF)相互作用发挥功能。HSPG2属于硫酸乙酰肝素蛋白聚糖(HSPG)基因家族,该家族成员共同特点是含有硫酸乙酰肝素糖链,能够结合多种配体并参与细胞间通讯。HSPG2突变可导致多种遗传性疾病,最常见的是Schwartz-Jampel综合征(表现为骨骼异常和肌强直)和Dyssegmental发育不良(严重骨骼发育异常)。这些突变通常影响蛋白聚糖的结构或功能,破坏基底膜完整性或干扰生长因子信号。HSPG2过表达与肿瘤进展相关,可能通过促进血管生成和肿瘤细胞侵袭;而表达降低则可能导致组织脆弱和发育缺陷。该基因在胚胎发育中至关重要,敲除小鼠模型显示致死性表型。HSPG2还参与伤口愈合、软骨形成和神经系统发育等过程,其表达水平变化可能影响这些生理过程。

This gene encodes the perlecan protein, which consists of a core protein to which three long chains of glycosaminoglycans (heparan sulfate or chondroitin sulfate) are attached. The perlecan protein is a large multidomain proteoglycan that binds to and cross-links many extracellular matrix components and cell-surface molecules. It has been shown that this protein interacts with laminin, prolargin, collagen type IV, FGFBP1, FBLN2, FGF7 and transthyretin, etc., and it plays essential roles in multiple biological activities. Perlecan is a key component of the vascular extracellular matrix, where it helps to maintain the endothelial barrier function. It is a potent inhibitor of smooth muscle cell proliferation and is thus thought to help maintain vascular homeostasis. It can also promote growth factor (e.g., FGF2) activity and thus stimulate endothelial growth and re-generation. It is a major component of basement membranes, where it is involved in the stabilization of other molecules as well as being involved with glomerular permeability to macromolecules and cell adhesion. Mutations in this gene cause Schwartz-Jampel syndrome type 1, Silverman-Handmaker type of dyssegmental dysplasia, and tardive dyskinesia. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014]

该基因编码的蛋白质的基底膜,其中包括到粘多糖(硫酸乙酰肝素或硫酸软骨素)的三长链连接一个核心蛋白。的串珠素蛋白是结合和交联的许多细胞外基质组分和细胞表面分子的大型多域蛋白多糖。已经表明,该蛋白与层粘连蛋白,prolargin,IV型胶原,FGFBP1,FBLN2,FGF7和运甲状腺素等相互作用,并且它在多个生物活性至关重要的作用。串珠素是血管的细胞外基质,它有助于维持内皮屏障功能的关键组成部分。它是平滑肌细胞增殖的有效抑制剂,并因此认为有助于维持血管稳态。它也能促进生长因子(例如,FGF2)活性,因此刺激内皮细胞生长和重新生成。它是基底膜,在那里它参与其他分子的稳定化以及被卷入与肾小球通透性大分子和细胞粘附的主要组成部分。这种基因的原因施瓦茨 - 降边辨证分型1突变,西尔弗曼-Handmaker型dyssegmental发育不良,和迟发性运动障碍。这个基因的选择性剪接的结果在多个转录变体。 [由RefSeq的,2014年5月提供]

HSPG2基因的碱基序列:[NCBI]
Loading Gene Browser...
HSPG2基因的碱基突变:           仅显示部分snp
rs14494       rs747546       rs878949       rs897467       rs897468       rs897469       rs897470       rs897471       rs897472       rs897474       rs921847       rs989994       rs1002480       rs1049644       rs1049675       rs1065017       rs1076028      

HSPG2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TACTGTGTCTGTGCTCCAC
59
AGTTCAGATCCAGGGTCTG
58
GAAGTGGAACAGTGCTCCT
60
ACAGGTACCCAGGTAGAGG
60
CCACAGCTACAATGAGTGTG
59
CTGGCTCCTCACAATTGAG
58
GGCAATGCTATGATAGCTCC
59
ACAGGTCTCCTTTGAATCCA
59
CCATCGTCATCTCCGTCTC
60
CAATTCTGATGGGCATGGA
58
CATAGGCTGCAACTGTGAC
59
CAGATGCTGCCTGATTTCC
59
CAGGTACCTACGTCTGCAC
60
TGTAGGCATCCTTGATGGT
58
CTCCTCCTTCCACAGACTC
59
CATAGGAGGTCACCTTGTCC
60
TTCATCAAGGAGCTGGATGG
60
AGCATCTCCTGAATCTGAGC
60
CTCCTGACATCAGCTGGAG
60
ATCAGCATGTTGTTCTCCAG
58
      尚未收录相关数据

HSPG2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HSPG2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005509
A0A0U1RQT3 (UniProtKB)
IEA
GO:0001523
P98160 (UniProtKB)
TAS
GO:0001525
P98160 (UniProtKB)
IEA
GO:0005509
P98160 (UniProtKB)
IEA
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005515
P98160 (UniProtKB)
IPI
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005576
P98160 (UniProtKB)
TAS
GO:0005604
P98160 (UniProtKB)
IEA
GO:0005615
P98160 (UniProtKB)
IDA
GO:0005615
P98160 (UniProtKB)
IDA
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005796
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005886
P98160 (UniProtKB)
TAS
GO:0005925
P98160 (UniProtKB)
IDA
GO:0006024
P98160 (UniProtKB)
TAS
GO:0006027
P98160 (UniProtKB)
TAS
GO:0008022
P98160 (UniProtKB)
IPI
GO:0022617
P98160 (UniProtKB)
TAS
GO:0030198
P98160 (UniProtKB)
TAS
GO:0030203
P98160 (UniProtKB)
TAS
GO:0031012
P98160 (UniProtKB)
IDA
GO:0042157
P98160 (UniProtKB)
TAS
GO:0043202
P98160 (UniProtKB)
TAS
GO:0043202
P98160 (UniProtKB)
TAS
GO:0044267
P98160 (UniProtKB)
TAS
GO:0070062
P98160 (UniProtKB)
IDA
GO:0070062
P98160 (UniProtKB)
IDA
GO:0070062
P98160 (UniProtKB)
IDA
GO:0070062
P98160 (UniProtKB)
IDA
GO:0070062
P98160 (UniProtKB)
IDA
GO:0031012
P98160 (UniProtKB)
IDA
GO:0031012
P98160 (UniProtKB)
ISS

可能调控 HSPG2基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Schwartz-Jampel Syndrome 0.441357209 5 1 BeFree_CLINVAR_MGD_ORPHANET_UNIPROT
Dyssegmental dysplasia 0.320814326 3 0 BeFree_CTD_human_MGD_ORPHANET
Osteochondrodysplasias 0.12272435 3 0 CTD_human_LHGDN
Craniofacial Abnormalities 0.120271442 1 0 BeFree_CTD_human
Schizophrenia, Childhood 0.12 0 1 CLINVAR
THANATOPHORIC DYSPLASIA, TYPE I (disorder) 0.080271442 1 0 BeFree_MGD
Diabetes Mellitus, Experimental 0.08 1 0 RGD
Hypertensive disease 0.08 1 0 RGD
Transposition of the Great Arteries, Dextro-Looped 1 0.08 0 0 MGD
Liver carcinoma 0.02035814 75 0 BeFree

联系方式

山东省济南市章丘区文博路2号 齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号大学科技园北区F座4单元2楼

电话: 0531-88819269

E-mail: product@genelibs.com

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。