LMO2 (LIM domain only 2)

symbol:
LMO2
locus group:
protein-coding gene
location:
11p13
gene_family:
alias symbol:
TTG2|RHOM2|RBTN2
alias name:
T-cell translocation gene 2|rhombo…
entrez id:
4005
ensembl gene id:
ENSG00000135363
ucsc gene id:
uc001mve.5
refseq accession:
NM_005574
hgnc_id:
HGNC:6642
approved reserved:
1991-08-21
11p13
基因染色体位置图

LMO2(LIM domain only 2)是一种重要的转录调节因子,属于LIM-only蛋白家族。该基因编码的蛋白质含有两个LIM结构域,这些结构域介导蛋白质-蛋白质相互作用,使其能够与其他转录因子或调控蛋白结合形成复合物,从而调控基因表达。LMO2在造血系统的发育中起关键作用,特别是在红系和淋巴系细胞的生成过程中。它通过与TAL1、GATA1和LDB1等转录因子形成复合物,激活或抑制下游靶基因的表达,确保造血干细胞的正常分化和成熟。LMO2的主要作用位点包括骨髓、脾脏和胸腺等造血组织。突变或异常表达可能破坏其功能,导致造血系统紊乱。例如,染色体易位导致的LMO2过表达与T细胞急性淋巴细胞白血病(T-ALL)的发生密切相关,因为其异常激活会促进T细胞前体细胞的恶性增殖。此外,LMO2在血管生成中也发挥作用,其表达水平影响内皮细胞的迁移和血管形成。降低LMO2表达可能导致造血功能障碍或贫血,而过表达则可能诱发白血病或其他恶性肿瘤。LMO2属于LIM-only基因家族(LMO家族),该家族成员(如LMO1、LMO3、LMO4)均含有LIM结构域,参与细胞分化、发育和信号转导的调控。这些蛋白通常作为分子支架,帮助组装转录复合物,但缺乏直接的DNA结合能力,依赖与其他蛋白的相互作用发挥功能。LMO2的异常表达不仅影响造血系统,还可能干扰其他信号通路,如Notch和Wnt通路,进一步加剧疾病进展。研究LMO2的功能和调控机制对理解血液系统疾病和开发靶向治疗策略具有重要意义。

LMO2 encodes a cysteine-rich, two LIM-domain protein that is required for yolk sac erythropoiesis. The LMO2 protein has a central and crucial role in hematopoietic development and is highly conserved. The LMO2 transcription start site is located approximately 25 kb downstream from the 11p13 T-cell translocation cluster (11p13 ttc), where a number T-cell acute lymphoblastic leukemia-specific translocations occur. Alternative splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Nov 2008]

LMO2编码时所需卵黄囊红血球生成富含半胱氨酸的两个LIM结构域蛋白。该LMO2蛋白在造血发展的核心和关键作用,是高度保守的。该LMO2转录起始位点位于约25 kb的从11p13 T细胞易位簇(11p13 TTC),其中一些T细胞急性淋巴细胞白血病特异,易位发生的下游。在多个转录剪接变异体导致编码不同亚型。[由RefSeq的,2008年11月提供]

LMO2基因的碱基序列:[NCBI]
Loading Gene Browser...
LMO2基因的碱基突变:           仅显示部分snp
rs4007       rs7447       rs746481       rs746482       rs746483       rs879414       rs883495       rs911816       rs911817       rs932662       rs1885523       rs1885524       rs1885525       rs1885526       rs2038602       rs2038603       rs2104178      

LMO2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GGACCCTTCAGAGTCACTG
59
AGAGAAGGCCAAGCATCAG
60
TCTACTACAAACTGGGCCG
59
CATCTCATAGGCACGAATCC
58
TCTTTGGCGTTTGAAGGGA
60
CACTGGTTCCTCTGAAGGG
60
CCTTCAGAGGAACCAGTGG
60
CCTTCAGGAAGTAGCGGTC
60
CTTTGGCGTTTGAAGGGAG
60
CCACTGGTTCCTCTGAAGG
60
CTGGACCCTTCAGAGTCAC
59
CTCACCAGAGTGAGACCAG
59
CCCTTCAGAGGAACCAGTG
60
CTTCAGGAAGTAGCGGTCC
60
TCTACTACAAACTGGGCCG
59
ATCTCATAGGCACGAATCCG
60
CCTTCAGAGGAACCAGTGG
60
CTTCAGGAAGTAGCGGTCC
60
TCTACTACAAACTGGGCCG
59
TCTCATAGGCACGAATCCG
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
LMO2
ANGPT2
Unknown
LMO2
CDH1
Repression
LMO2
ELK1
Unknown
LMO2
ERG
Activation
LMO2
FGF2
Activation
LMO2
GYPA
Repression
LMO2
LEF1
Repression
LMO2
LYL1
Unknown
LMO2
NFATC1
Activation
LMO2
ZEB1
Repression

LMO2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

LMO2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000977
P25791 (UniProtKB)
IDA
GO:0000981
P25791 (UniProtKB)
IDA
GO:0001102
P25791 (UniProtKB)
IPI
GO:0001190
P25791 (UniProtKB)
IDA
GO:0001228
P25791 (UniProtKB)
IDA
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005515
P25791 (UniProtKB)
IPI
GO:0005634
P25791 (UniProtKB)
IEA
GO:0005667
P25791 (UniProtKB)
IDA
GO:0007275
P25791 (UniProtKB)
TAS
GO:0008270
P25791 (UniProtKB)
IEA
GO:0042789
P25791 (UniProtKB)
IDA
GO:0043425
P25791 (UniProtKB)
IPI
GO:0045944
P25791 (UniProtKB)
IDA
GO:0048037
P25791 (UniProtKB)
IPI
GO:0070888
P25791 (UniProtKB)
IDA
GO:0097067
P25791 (UniProtKB)
IDA

可能调控 LMO2基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Precursor T-Cell Lymphoblastic Leukemia-Lymphoma 0.12842463 22 0 BeFree_CTD_human_LHGDN
Leukemia, T-Cell 0.122714419 10 0 BeFree_CTD_human
Precursor Cell Lymphoblastic Leukemia Lymphoma 0.080271442 1 0 BeFree_MGD
leukemia 0.007610304 18 0 BeFree_LHGDN
B-Cell Lymphomas 0.005905708 5 0 BeFree_GAD_LHGDN
Diffuse Large B-Cell Lymphoma 0.003995683 7 0 BeFree_GAD
Leukemia, Myelocytic, Acute 0.003538676 4 0 BeFree_LHGDN
Lymphoma, Follicular 0.002909916 3 0 BeFree_GAD
Hodgkin Disease 0.002909916 3 0 BeFree_GAD
Malignant neoplasm of lung 0.002367032 1 0 GAD

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