PTPN6 (protein tyrosine phosphatase non-receptor type 6)

symbol:
PTPN6
locus group:
protein-coding gene
location:
12p13.31
gene_family:
SH2 domain containing|Protein tyrosine phosphatases, non-receptor type
alias symbol:
HCP|HCPH|PTP-1C|SHP-1|SHP1
alias name:
None
entrez id:
5777
ensembl gene id:
ENSG00000111679
ucsc gene id:
uc001qsa.1
refseq accession:
NM_002831
hgnc_id:
HGNC:9658
approved reserved:
1992-02-12
12p13.31
基因染色体位置图

PTPN6(Protein Tyrosine Phosphatase Non-Receptor Type 6),也称为SHP-1(Src Homology 2 domain-containing Phosphatase-1),是一种非受体型蛋白酪氨酸磷酸酶,属于PTP(Protein Tyrosine Phosphatase)基因家族。PTP家族的主要功能是通过去磷酸化调控信号转导通路,影响细胞增殖、分化、凋亡和免疫反应等过程。PTPN6主要在造血细胞中表达,其结构包含两个SH2结构域和一个催化结构域,通过SH2结构域与磷酸化的酪氨酸残基结合,从而负调控多种信号通路,如JAK/STAT、MAPK和PI3K/AKT等。PTPN6通过去磷酸化作用抑制过度激活的免疫反应,维持免疫稳态。PTPN6的功能异常与多种疾病相关,其突变或表达异常可导致自身免疫性疾病、炎症性疾病和癌症。例如,PTPN6功能丧失性突变与小鼠的“motheaten”表型相关,表现为严重的自身免疫和炎症反应。在人类中,PTPN6的表达降低或功能缺失与系统性红斑狼疮(SLE)、类风湿性关节炎(RA)等自身免疫性疾病的发生有关。此外,PTPN6在某些癌症中表达异常,如在白血病和淋巴瘤中可能作为抑癌基因发挥作用,其表达降低可能导致细胞增殖失控。PTPN6的过表达可能抑制免疫细胞的活化,导致免疫抑制或感染易感性增加;而表达降低则可能引发过度免疫反应或自身免疫疾病。PTPN6与PTPN11(SHP-2)同属SHP亚家族,两者结构相似但功能不同,PTPN11通常促进信号传导,而PTPN6主要起抑制作用。PTPN6的调控异常还可能影响其他基因的表达或功能,如STAT蛋白的磷酸化状态,从而改变下游基因的转录活性。总之,PTPN6在免疫调节和细胞信号转导中发挥关键作用,其表达或功能异常与多种疾病密切相关。

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. N-terminal part of this PTP contains two tandem Src homolog (SH2) domains, which act as protein phospho-tyrosine binding domains, and mediate the interaction of this PTP with its substrates. This PTP is expressed primarily in hematopoietic cells, and functions as an important regulator of multiple signaling pathways in hematopoietic cells. This PTP has been shown to interact with, and dephosphorylate a wide spectrum of phospho-proteins involved in hematopoietic cell signaling. Multiple alternatively spliced variants of this gene, which encode distinct isoforms, have been reported. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质是蛋白质酪氨酸磷酸酶(PTP)家族的一个成员。的PTPs已知是信令调节多种细胞过程,包括细胞生长,分化,有丝分裂周期,和致癌性转化的分子。此PTP的N末端部分包含两个串联的Src同源(SH2)域,它作为蛋白质磷酸酪氨酸结合结构域,并介导此PTP与其底物的相互作用。此PTP主要在造血细胞,并用作在造血细胞中多种信号传导途径的重要调节表达。此PTP已显示与交互,和去磷酸化参与造血细胞信号磷酸 - 蛋白质的宽光谱。 ,已经报道了这个基因的多个可变剪接变体,其编码不同同种型。 [由RefSeq的,2008年7月提供]

PTPN6基因的碱基序列:[NCBI]
Loading Gene Browser...
PTPN6基因的碱基突变:           仅显示部分snp
rs729751       rs729970       rs741090       rs744167       rs2019743       rs7972988       rs71067152       rs71450177       rs73262868       rs73262873       rs74057229       rs78163811       rs112297142       rs113451683       rs116313162       rs139068225       rs140277271      

PTPN6基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GAGAACATCTCCACCAAGG
58
CCATCTGGATGGTCTTCTG
57
CATCTGAGGCTTAGTCCCTG
60
TGAAACCACCTCACCATCC
60
CATCTGAGGCTTAGTCCCTG
60
TGAAACCACCTCACCATCC
60
TTGGAACTGAACAAGAAGCA
58
CCTGCTTCTGCAAACTCTC
59
ACTAGTGAGAGGTGGTACCA
59
CTCTCACGCACAAGAAACG
60
CGGGAACATCACCTATCCC
60
ACATCCTCCTTGTGTTTGGA
59
ACTAGTGAGAGGTGGTACCA
59
CTCTCACGCACAAGAAACG
60
TTTCACCGAGACCTCAGTG
59
CCATGGTACCACCTCTCAC
60
GATGGTGAGGTGGTTTCAC
59
GAATATGGGTCACCTGATCC
58
ACTAGTGAGAGGTGGTACCA
59
CTCTCACGCACAAGAAACG
60
转录因子
影响基因
影响类型
参考文献链接(PubMed)
NFKB1
PTPN6
Unknown
NPM1
PTPN6
Activation
PKNOX1
PTPN6
Activation
RELA
PTPN6
Unknown
STAT3
PTPN6
Repression
STAT3
PTPN6
Unknown
USF1
PTPN6
Unknown
USF2
PTPN6
Unknown

PTPN6基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

PTPN6基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0001784
P29350 (UniProtKB)
IEA
GO:0002924
P29350 (UniProtKB)
IEA
GO:0004725
P29350 (UniProtKB)
TAS
GO:0004725
P29350 (UniProtKB)
TAS
GO:0004725
P29350 (UniProtKB)
TAS
GO:0005001
P29350 (UniProtKB)
IDA
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005515
P29350 (UniProtKB)
IPI
GO:0005634
P29350 (UniProtKB)
IDA
GO:0005634
P29350 (UniProtKB)
IDA
GO:0005730
P29350 (UniProtKB)
IDA
GO:0005737
P29350 (UniProtKB)
IDA
GO:0005737
P29350 (UniProtKB)
IDA
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005829
P29350 (UniProtKB)
TAS
GO:0005911
P29350 (UniProtKB)
IEA
GO:0006470
P29350 (UniProtKB)
IDA
GO:0006915
P29350 (UniProtKB)
TAS
GO:0007186
P29350 (UniProtKB)
TAS
GO:0008283
P29350 (UniProtKB)
IDA
GO:0008284
P29350 (UniProtKB)
IMP
GO:0008284
P29350 (UniProtKB)
IMP
GO:0008285
P29350 (UniProtKB)
NAS
GO:0014068
P29350 (UniProtKB)
IMP
GO:0016020
P29350 (UniProtKB)
TAS
GO:0017124
P29350 (UniProtKB)
IEA
GO:0018108
P29350 (UniProtKB)
IDA
GO:0018108
P29350 (UniProtKB)
IDA
GO:0019901
P29350 (UniProtKB)
IPI
GO:0030154
P29350 (UniProtKB)
IDA
GO:0030168
P29350 (UniProtKB)
TAS
GO:0030220
P29350 (UniProtKB)
IEA
GO:0031295
P29350 (UniProtKB)
TAS
GO:0033277
P29350 (UniProtKB)
IEA
GO:0033630
P29350 (UniProtKB)
IEA
GO:0035335
P29350 (UniProtKB)
IEA
GO:0035335
P29350 (UniProtKB)
IEA
GO:0035556
P29350 (UniProtKB)
IEA
GO:0035855
P29350 (UniProtKB)
IEA
GO:0042105
P29350 (UniProtKB)
IEA
GO:0042130
P29350 (UniProtKB)
IEA
GO:0042169
P29350 (UniProtKB)
IEA
GO:0042267
P29350 (UniProtKB)
IEA
GO:0043407
P29350 (UniProtKB)
IEA
GO:0045577
P29350 (UniProtKB)
IEA
GO:0050732
P29350 (UniProtKB)
IMP
GO:0050853
P29350 (UniProtKB)
IEA
GO:0050859
P29350 (UniProtKB)
IEA
GO:0050860
P29350 (UniProtKB)
IEA
GO:0050900
P29350 (UniProtKB)
TAS
GO:0051279
P29350 (UniProtKB)
IEA
GO:0060338
P29350 (UniProtKB)
TAS
GO:0070062
P29350 (UniProtKB)
IDA
GO:0070062
P29350 (UniProtKB)
IDA
GO:0070372
P29350 (UniProtKB)
IDA
GO:0070527
P29350 (UniProtKB)
IEA
GO:2000045
P29350 (UniProtKB)
IMP

可能调控 PTPN6基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Calcinosis 0.12 1 0 CTD_human
Respiratory Hypersensitivity 0.12 1 0 CTD_human
Heart valve disease 0.12 1 0 CTD_human
Lymphoma 0.007891677 9 0 BeFree_LHGDN
leukemia 0.007620235 8 0 BeFree_LHGDN
Lymphoma, T-Cell, Cutaneous 0.005720142 3 0 BeFree_LHGDN
Multiple Myeloma 0.004353001 7 0 BeFree_LHGDN
Multiple Sclerosis 0.003810118 4 0 BeFree_LHGDN
Sezary Syndrome 0.003267234 3 0 BeFree_LHGDN
Epstein-Barr Virus Infections 0.002995792 2 0 BeFree_LHGDN

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