RAB13 (RAB13, member RAS oncogene family)

symbol:
RAB13
locus group:
protein-coding gene
location:
1q21.3
gene_family:
RAB, member RAS oncogene GTPases
alias symbol:
None
alias name:
None
entrez id:
5872
ensembl gene id:
ENSG00000143545
ucsc gene id:
uc001fdt.3
refseq accession:
NM_002870
hgnc_id:
HGNC:9762
approved reserved:
1998-01-21
1q21.3
基因染色体位置图

RAB13属于RAS超家族中的RAB小G蛋白家族,该家族成员主要参与调控细胞内囊泡运输和膜转运过程。RAB13是一种小分子GTP酶,通过GTP/GDP结合状态切换调控其活性,在细胞紧密连接形成、细胞极性和细胞迁移中发挥关键作用。它主要在紧密连接处富集,与连接黏附分子(JAM)相互作用,参与上皮屏障功能的维持。RAB13通过调控肌动蛋白细胞骨架重组和膜蛋白运输,影响细胞间连接动态。突变可能导致其GTP酶活性异常,破坏细胞间连接稳定性,与炎症性肠病、癌症转移等疾病相关。过表达会增强细胞迁移能力,促进肿瘤侵袭和转移,同时可能破坏上皮屏障功能;而表达降低则可能损害细胞间连接完整性,影响组织屏障功能。RAB家族共性包括:具有保守的GTP结合结构域,通过效应蛋白调控囊泡运输,参与分泌途径、内吞过程和细胞器定位等。RAB13与RAB8等成员功能相关,共同调控极性蛋白运输。该基因异常表达与乳腺癌、结肠癌等恶性肿瘤的进展密切相关,可能成为癌症治疗的潜在靶点。

This gene is a member of the Rab family of small G proteins and plays a role in regulating membrane trafficking between trans-Golgi network (TGN) and recycling endosomes (RE). The encoded protein is involved in the assembly of tight junctions, which are components of the apical junctional complex (AJC) of epithelial cells. The AJC plays a role in forming a barrier between luminal contents and the underlying tissue. Additional functions associated with the protein include endocytic recycling of occludin, regulation of epithelial cell scattering, neuronal regeneration and regulation of neurite outgrowth. Alternately spliced transcript variants have been observed for this gene. A pseudogene associated with this gene is located on chromosome 12. [provided by RefSeq, Jan 2013]

这个基因是拉布家庭小G蛋白的成员,并起着调节跨高尔基网络(TGN)和回收内涵体(RE)之间的膜运输的作用。所编码的蛋白质是参与紧密连接,这是根尖连接复合的部件的组装(AJC)的上皮细胞。该踏步起着形成管腔内容和下面的组织之间的屏障的作用。与蛋白质相关的其他功能还包括occludin的内吞的回收,上皮细胞散射,神经元再生和轴突生长的调控监管。交替剪接转录变体已经观察到这种基因。与这种基因相关联的假位于[由RefSeq的,2013年1月提供] 12号染色体

RAB13基因的碱基序列:[NCBI]
Loading Gene Browser...
RAB13基因的碱基突变:           仅显示部分snp
rs2230324       rs2275481       rs3838485       rs10908578       rs11264796       rs12033575       rs16835703       rs61805527       rs71584158       rs71584159       rs72633643       rs72694280       rs76879967       rs77449937       rs78387882       rs111554216       rs111939539      

RAB13基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GGAAGAAGATCAAACTACAAGTCTG
60
TAGGATAATGCCCATGGCTC
60
GAGAATTGATTTCAAGATCCGC
58
GTATACTAGGATAATGCCCATGG
58
ACTACAAGTCTGGGACACG
59
ACTTCATACCATGGCTCCAC
60
CTACAAGTCTGGGACACGG
60
GTGATGTCGTATACTAGGATAATGC
59
CACGGATGAGAAATCTTTCGA
59
TCTCGAGCCAACTTATCGG
59
TTCAAGTTGCTGCTGATCG
59
AATCAATTCCGATGGTGGAG
58
TTCAAGTTGCTGCTGATCG
59
AATCAATTCCGATGGTGGAG
58
AACTACAAGTCTGGGACACG
60
TTCATACCATGGCTCCACG
60
AAACTACAAGTCTGGGACAC
58
TGTCGTATACTAGGATAATGCC
57
CACGGATGAGAAATCTTTCGAG
60
TCTCGAGCCAACTTATCGG
59
      尚未收录相关数据

RAB13基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

RAB13基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005525
A0A087WWB9 (UniProtKB)
IEA
GO:0005622
A0A087WWB9 (UniProtKB)
IEA
GO:0007264
A0A087WWB9 (UniProtKB)
IEA
GO:0003924
P51153 (UniProtKB)
EXP
GO:0003924
P51153 (UniProtKB)
EXP
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005515
P51153 (UniProtKB)
IPI
GO:0005525
P51153 (UniProtKB)
IDA
GO:0005737
P51153 (UniProtKB)
IDA
GO:0005802
P51153 (UniProtKB)
IDA
GO:0005886
P51153 (UniProtKB)
IDA
GO:0005886
P51153 (UniProtKB)
IDA
GO:0005886
P51153 (UniProtKB)
IDA
GO:0005923
P51153 (UniProtKB)
IDA
GO:0005923
P51153 (UniProtKB)
IDA
GO:0006904
P51153 (UniProtKB)
IBA
GO:0007264
P51153 (UniProtKB)
IEA
GO:0009306
P51153 (UniProtKB)
IBA
GO:0010737
P51153 (UniProtKB)
IMP
GO:0016197
P51153 (UniProtKB)
IMP
GO:0016328
P51153 (UniProtKB)
IDA
GO:0030027
P51153 (UniProtKB)
ISS
GO:0030139
P51153 (UniProtKB)
IDA
GO:0030659
P51153 (UniProtKB)
TAS
GO:0030866
P51153 (UniProtKB)
ISS
GO:0031175
P51153 (UniProtKB)
IMP
GO:0031410
P51153 (UniProtKB)
IDA
GO:0032456
P51153 (UniProtKB)
IMP
GO:0032593
P51153 (UniProtKB)
ISS
GO:0032869
P51153 (UniProtKB)
ISS
GO:0034236
P51153 (UniProtKB)
IEA
GO:0035767
P51153 (UniProtKB)
ISS
GO:0043005
P51153 (UniProtKB)
IDA
GO:0044795
P51153 (UniProtKB)
ISS
GO:0055037
P51153 (UniProtKB)
IDA
GO:0055038
P51153 (UniProtKB)
IEA
GO:0061024
P51153 (UniProtKB)
TAS
GO:0070062
P51153 (UniProtKB)
IDA
GO:0070830
P51153 (UniProtKB)
IMP
GO:0070830
P51153 (UniProtKB)
IMP
GO:0090002
P51153 (UniProtKB)
IMP
GO:0097368
P51153 (UniProtKB)
ISS
GO:1902463
P51153 (UniProtKB)
IEA
GO:0005794
P51153 (UniProtKB)
IDA

可能调控 RAB13基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Tumor Progression 0.000271442 1 0 BeFree
invasive cancer 0.000271442 1 0 BeFree

联系方式

山东省济南市章丘区文博路2号 齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号大学科技园北区F座4单元2楼

电话: 0531-88819269

E-mail: product@genelibs.com

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。