SOX12 (SRY-box transcription factor 12)

symbol:
SOX12
locus group:
protein-coding gene
location:
20p13
gene_family:
SRY (sex determining region Y)-boxes
alias symbol:
None
alias name:
None
entrez id:
6666
ensembl gene id:
ENSG00000177732
ucsc gene id:
uc002wdh.5
refseq accession:
NM_006943
hgnc_id:
HGNC:11198
approved reserved:
1997-07-07
20p13
基因染色体位置图

SOX12(SRY-box transcription factor 12)属于SOX基因家族,该家族以共同的SRY(性别决定区Y)相关HMG(高迁移率族)盒DNA结合域为特征,能够调控胚胎发育、细胞命运决定和组织分化。SOX12在多种组织中广泛表达,但研究较少,已知其功能部分冗余于家族成员SOX4和SOX11。它通过结合DNA调控靶基因转录,参与神经发育、骨骼形成及造血过程。SOX12的突变可能破坏其DNA结合能力或转录调控功能,但目前与明确疾病的关联较少,少数研究提示其可能与某些癌症(如胶质瘤、乳腺癌)的进展相关,但证据有限。若SOX12过表达,可能异常激活下游促增殖或抗凋亡基因,促进肿瘤发生;而表达降低可能影响发育相关通路,但具体机制尚不清晰。SOX基因家族的共性包括:依赖HMG盒识别特定DNA序列(如AACAAT模体),通过与其他转录因子(如TCF/LEF)协作调控Wnt等信号通路,并在干细胞多能性、神经嵴细胞迁移等过程中发挥关键作用。目前SOX12的病理机制研究较少,需更多实验验证其功能及临床意义。

Members of the SOX family of transcription factors are characterized by the presence of a DNA-binding high mobility group (HMG) domain, homologous to the HMG box of sex-determining region Y (SRY). Forming a subgroup of the HMG domain superfamily, SOX proteins have been implicated in cell fate decisions in a diverse range of developmental processes. SOX transcription factors have diverse tissue-specific expression patterns during early development and have been proposed to act as target-specific transcription factors and/or as chromatin structure regulatory elements. The protein encoded by this gene was identified as a SOX family member based on conserved domains, and its expression in various tissues suggests a role in both differentiation and maintenance of several cell types. [provided by RefSeq, Jan 2013]

的SOX转录因子家族的成员由DNA结合高迁移率族(HMG)结构域的存在,同源性别决定区Y(SRY)的HMG盒表征。形成HMG域家族的一个分组,SOX蛋白有牵连的细胞命运决定在多元化发展的过程。 SOX转录因子早期发育过程中有不同的组织特异性表达模式并且已经提出作为靶特异性转录因子和/或染色质结构调节元件。由该基因编码的蛋白质被鉴定为基于保守结构域Sox家族成员,其在不同组织表达表明在两种分化和维持数种细胞类型的作用。 [由RefSeq的,2013年1月提供]

SOX12基因的碱基序列:[NCBI]
Loading Gene Browser...
SOX12基因的碱基突变:           仅显示部分snp
rs2268434       rs6036828       rs6049740       rs6049756       rs6049762       rs6049789       rs6050030       rs6083565       rs6106898       rs11556199       rs12624721       rs62191421       rs73071018       rs73574572       rs73574574       rs76063236       rs78689242      

SOX12基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CAGGACTCGGAGAAGATCC
59
ACTTGTAGTCCGGGTAATCC
59
CAGGACTCGGAGAAGATCC
59
CTTGTAGTCCGGGTAATCC
57
CAGGACTCGGAGAAGATCC
59
TTGTAGTCCGGGTAATCCG
59
      尚未收录相关数据

SOX12基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SOX12基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000976
O15370 (UniProtKB)
ISS
GO:0001077
O15370 (UniProtKB)
ISS
GO:0001105
O15370 (UniProtKB)
ISS
GO:0003677
O15370 (UniProtKB)
NAS
GO:0005575
O15370 (UniProtKB)
ND
GO:0005654
O15370 (UniProtKB)
IDA
GO:0006357
O15370 (UniProtKB)
NAS
GO:0006366
O15370 (UniProtKB)
IEA
GO:0021510
O15370 (UniProtKB)
ISS
GO:0032993
O15370 (UniProtKB)
IEA
GO:0045165
O15370 (UniProtKB)
IEP
GO:0045944
O15370 (UniProtKB)
ISS
GO:0065004
O15370 (UniProtKB)
IEA

可能调控 SOX12基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Malignant lymphoma, lymphocytic, intermediate differentiation, diffuse 0.000542884 2 0 BeFree
Colon Carcinoma 0.000271442 1 0 BeFree
Malignant tumor of colon 0.000271442 1 0 BeFree
Developmental delay (disorder) 0.000271442 1 0 BeFree
Congenital Abnormality 0.000271442 1 0 BeFree

联系方式

山东省济南市章丘区文博路2号 齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号大学科技园北区F座4单元2楼

电话: 0531-88819269

E-mail: product@genelibs.com

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。