TAF4B (TATA-box binding protein associated factor 4b)

symbol:
TAF4B
locus group:
protein-coding gene
location:
18q11.2
gene_family:
alias symbol:
TAFII105
alias name:
TATA box binding protein (TBP)-ass…
entrez id:
6875
ensembl gene id:
ENSG00000141384
ucsc gene id:
uc002kvu.5
refseq accession:
NM_005640
hgnc_id:
HGNC:11538
approved reserved:
1997-05-09
18q11.2
基因染色体位置图

TAF4B(TATA-box binding protein associated factor 4B)是转录因子TFIID复合体的一个亚基,属于TAF(TATA-box binding protein associated factors)基因家族。TAF家族成员是RNA聚合酶II介导的转录起始所必需的核心调控因子,它们与TBP(TATA结合蛋白)结合形成TFIID复合体,共同识别启动子区域的TATA盒或其他核心启动子元件,调控基因表达。TAF4B在生殖系统(如睾丸和卵巢)以及神经系统中高表达,尤其在精子发生和卵泡发育中起关键作用。其生物学功能包括参与染色质重塑、转录激活或抑制,并可能通过与其他转录因子(如CREB)相互作用调节细胞特异性基因表达。TAF4B的特点是其组织特异性表达模式,例如在小鼠中敲除TAF4B会导致不育,表现为精子发生阻滞和卵泡发育异常,说明其对生殖细胞成熟至关重要。突变或功能缺失可能导致生殖障碍,如非梗阻性无精症或卵巢早衰。目前尚未明确TAF4B与癌症的直接关联,但某些研究提示其异常表达可能影响细胞增殖相关通路。若TAF4B过表达,可能干扰TFIID复合体的正常组装,导致转录失调,影响生殖或神经功能;而表达降低则可能引发配子发生缺陷。TAF4B所在的TAF家族共性为:均含有组蛋白折叠结构域(histone fold domain),可模拟组蛋白功能协助DNA结合,且多数成员具有双重作用——既作为通用转录机器的一部分,又参与组织特异性调控。专业术语解释:TFIID是识别启动子的多蛋白复合体;TATA盒是启动子中富含TATA碱基序列的区域,指导转录起始;染色质重塑指通过修饰染色质结构调控基因可及性的过程。若需进一步探讨其分子机制或疾病关联,可扩展研究其互作网络或突变谱。

TATA binding protein (TBP) and TBP-associated factors (TAFs) participate in the formation of the TFIID protein complex, which is involved in initiation of transcription of genes by RNA polymerase II. This gene encodes a cell type-specific TAF that may be responsible for mediating transcription by a subset of activators in B cells. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jun 2014]

TATA结合蛋白(TBP)和磷酸三丁酯相关因子(TAFS)参加TFIID蛋白复合物,它是由RNA聚合酶II参与基因的转录起始的形成。这个基因编码的细胞类型特异性的TAF可能负责通过在B细胞活化剂的一个子集介导的转录。已发现该基因编码的两种不同亚型三个抄本变形。 [由RefSeq的,2014年6月提供]

TAF4B基因的碱基序列:[NCBI]
Loading Gene Browser...
TAF4B基因的碱基突变:           仅显示部分snp
rs8820       rs13855       rs507613       rs728203       rs936522       rs1115979       rs1126044       rs1129711       rs1129713       rs1382260       rs1471420       rs1478284       rs1478285       rs1478286       rs1478287       rs1478288       rs1530599      

TAF4B基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TCAAGCAACTAGTAGTTCAGCA
60
TGGTCAATGTTGAGGAATGTG
59
AACATAACCTCAAGGCCAG
57
TAATTGTGAGCTAGAGTTCGG
58
CTGTCACTTCAAGCATCTCC
59
GATGTCATCCTCATCTCGGA
59
TCAAGCAACTAGTAGTTCAGCA
60
TGGTCAATGTTGAGGAATGTG
59
GGAGAAACTTCAGGTGCAG
59
AATAACAGGCTTGATGTGGT
58
TTGGAGAAACTTCAGGTGC
58
TAACAGGCTTGATGTGGTC
58
TAACATAACCTCAAGGCCAG
57
AATTGTGAGCTAGAGTTCGG
58
TCAAGCAACTAGTAGTTCAGC
58
TGGTCAATGTTGAGGAATGTG
59
TCTGTCACTTCAAGCATCTC
58
ATGTCATCCTCATCTCGGA
58
TCAAGCAACTAGTAGTTCAGC
58
TGGTCAATGTTGAGGAATGTG
59
      尚未收录相关数据

TAF4B基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

TAF4B基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003700
A0A0A0MSA8 (UniProtKB)
IEA
GO:0005669
A0A0A0MSA8 (UniProtKB)
IEA
GO:0006352
A0A0A0MSA8 (UniProtKB)
IEA
GO:0006355
A0A0A0MSA8 (UniProtKB)
IEA
GO:0046982
A0A0A0MSA8 (UniProtKB)
IEA
GO:0003700
J3KTH2 (UniProtKB)
IEA
GO:0005654
J3KTH2 (UniProtKB)
IDA
GO:0005669
J3KTH2 (UniProtKB)
IEA
GO:0005730
J3KTH2 (UniProtKB)
IDA
GO:0006352
J3KTH2 (UniProtKB)
IEA
GO:0006355
J3KTH2 (UniProtKB)
IEA
GO:0046982
J3KTH2 (UniProtKB)
IEA
GO:2000648
J3KTH2 (UniProtKB)
IEA
GO:0003677
Q92750 (UniProtKB)
IDA
GO:0003700
Q92750 (UniProtKB)
IEA
GO:0005654
Q92750 (UniProtKB)
IDA
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005654
Q92750 (UniProtKB)
TAS
GO:0005669
Q92750 (UniProtKB)
IEA
GO:0005730
Q92750 (UniProtKB)
IDA
GO:0005737
Q92750 (UniProtKB)
IEA
GO:0006355
Q92750 (UniProtKB)
IEA
GO:0006366
Q92750 (UniProtKB)
TAS
GO:0006367
Q92750 (UniProtKB)
TAS
GO:0006367
Q92750 (UniProtKB)
TAS
GO:0006368
Q92750 (UniProtKB)
TAS
GO:0007283
Q92750 (UniProtKB)
IEA
GO:0046982
Q92750 (UniProtKB)
IEA
GO:0048477
Q92750 (UniProtKB)
IEA
GO:0051059
Q92750 (UniProtKB)
IPI
GO:1901796
Q92750 (UniProtKB)
TAS

可能调控 TAF4B基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Venous Thromboembolism 0.12 1 1 GWASCAT
Ovarian Failure, Premature 0.002638474 1 0 BeFree_GAD
Adenocarcinoma of colon 0.000271442 1 0 BeFree
Tumor Progression 0.000271442 1 0 BeFree

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