TPM1 (tropomyosin 1)

symbol:
TPM1
locus group:
protein-coding gene
location:
15q22.2
gene_family:
Tropomyosins
alias symbol:
None
alias name:
None
entrez id:
7168
ensembl gene id:
ENSG00000140416
ucsc gene id:
uc002alh.4
refseq accession:
NM_001018004
hgnc_id:
HGNC:12010
approved reserved:
1991-07-18
15q22.2
基因染色体位置图

TPM1(Tropomyosin 1)是一种编码原肌球蛋白(tropomyosin)的基因,属于肌动蛋白结合蛋白家族,在肌肉收缩和非肌肉细胞骨架组织中起关键作用。TPM1基因通过选择性剪接产生多种亚型,主要功能是调节肌动蛋白(actin)细丝的稳定性,并与肌钙蛋白(troponin)复合物协同控制肌肉的收缩与舒张。其表达产物TPM1蛋白在心肌和骨骼肌中高度表达,通过结合肌动蛋白丝防止肌球蛋白(myosin)的异常结合,从而维持收缩的精确性。TPM1属于原肌球蛋白基因家族(Tropomyosin family),该家族成员均含有螺旋状结构域,能结合肌动蛋白并参与细胞运动、形态维持和信号传导。TPM1突变可导致其与肌动蛋白结合能力下降,引发家族性肥厚型心肌病(HCM)或扩张型心肌病(DCM),表现为心脏肥大或心腔扩大,严重时引发心力衰竭。此外,TPM1表达异常与某些癌症(如乳腺癌)相关,其低表达可能促进肿瘤细胞迁移和侵袭。TPM1过表达可能增强心肌收缩力但增加心律失常风险,而表达降低会导致肌纤维结构紊乱,影响肌肉功能。在非肌肉细胞中,TPM1通过调控细胞骨架动态影响细胞迁移和分裂,其表达水平变化可能干扰其他肌动蛋白相关基因(如ACTC1、MYH7)的功能。TPM1的某些亚型还具有组织特异性,例如TPM1α主要在平滑肌中表达,而TPM1κ多见于神经元。该基因的致病突变多为错义突变(如E62Q、D175N),通过破坏蛋白稳定性或肌动蛋白结合能力致病。研究还发现TPM1与代谢疾病(如糖尿病)存在潜在关联,可能通过影响胰岛素分泌细胞的骨架重构发挥作用。

This gene is a member of the tropomyosin family of highly conserved, widely distributed actin-binding proteins involved in the contractile system of striated and smooth muscles and the cytoskeleton of non-muscle cells. Tropomyosin is composed of two alpha-helical chains arranged as a coiled-coil. It is polymerized end to end along the two grooves of actin filaments and provides stability to the filaments. The encoded protein is one type of alpha helical chain that forms the predominant tropomyosin of striated muscle, where it also functions in association with the troponin complex to regulate the calcium-dependent interaction of actin and myosin during muscle contraction. In smooth muscle and non-muscle cells, alternatively spliced transcript variants encoding a range of isoforms have been described. Mutations in this gene are associated with type 3 familial hypertrophic cardiomyopathy. [provided by RefSeq, Jul 2008]

此基因是原肌球蛋白家族参与横纹肌和平滑肌的收缩系统和非肌肉细胞的细胞骨架高度保守,广泛分布的肌动蛋白结合蛋白的成员。原肌球蛋白是由布置为卷曲螺旋两种α-螺旋链的。它是聚合的结束沿微丝的两个槽端,并提供稳定的长丝。所编码的蛋白质是一种类型的α螺旋链的形成横纹肌,在那里它与肌钙蛋白复合物协会还起到调节肌肉收缩时的肌动蛋白和肌球蛋白的钙依赖性相互作用的主要原肌球蛋白。在平滑肌和非肌肉细胞中,编码范围同种型的可变剪接转录物变体已有描述。在这种基因突变与3型家族性肥厚性心肌病相关联。 [由RefSeq的,2008年7月提供]

TPM1基因的碱基序列:[NCBI]
Loading Gene Browser...
TPM1基因的碱基突变:           仅显示部分snp
rs6738       rs7668       rs8519       rs15880       rs707602       rs1050255       rs1071646       rs1135368       rs1135403       rs1574311       rs1972041       rs2173982       rs2414814       rs2729826       rs2729827       rs2729828       rs3218718      

TPM1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AGGATAAGTACTCGCAGAAGG
59
TTTAGTTACTGACCTCTCCGC
60
GATGCAGATGCTGAAGCTC
59
CTTCCTCTTTACCCGAGCT
59
ACTTAGAAGACGAGCTGTACG
60
GTCATATCGTTGAGAGCGTG
59
TGAGGAAGAGTTGGATCGT
58
TCAATGACTTTCATGCCTCTC
58
TGAGGAAGAGTTGGATCGT
58
TCAATGACTTTCATGCCTCTC
58
CTCTTTCTAATTACAGTACTCGCAG
59
GAGTCTCAGCCTCCTTCAG
59
CTCAGAAGGCAAATGTGCC
60
TCTGTCTTCCTTCTGCGAG
59
CAAATATGAAGAGGTGGCCC
59
ATTGTTCTTCCAGCTGTCG
58
CTTAGAAGATCAACTCTACCAGC
59
TTAATCCTCATTCAGGGCCA
59
GATGAGAGTGAGAGGTGGC
60
TAATTGTTCTTCCAGCTGTCG
59
      尚未收录相关数据

TPM1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

TPM1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0016021
B7Z596 (UniProtKB)
IEA
GO:0001701
P09493 (UniProtKB)
IEA
GO:0001725
P09493 (UniProtKB)
IDA
GO:0003065
P09493 (UniProtKB)
ISS
GO:0003779
P09493 (UniProtKB)
TAS
GO:0005200
P09493 (UniProtKB)
TAS
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005515
P09493 (UniProtKB)
IPI
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005829
P09493 (UniProtKB)
TAS
GO:0005856
P09493 (UniProtKB)
TAS
GO:0005862
P09493 (UniProtKB)
TAS
GO:0006928
P09493 (UniProtKB)
TAS
GO:0006936
P09493 (UniProtKB)
TAS
GO:0006937
P09493 (UniProtKB)
TAS
GO:0007010
P09493 (UniProtKB)
TAS
GO:0008016
P09493 (UniProtKB)
TAS
GO:0008092
P09493 (UniProtKB)
IPI
GO:0008307
P09493 (UniProtKB)
TAS
GO:0008360
P09493 (UniProtKB)
IMP
GO:0030017
P09493 (UniProtKB)
TAS
GO:0030049
P09493 (UniProtKB)
ISS
GO:0030049
P09493 (UniProtKB)
TAS
GO:0030336
P09493 (UniProtKB)
ISS
GO:0031529
P09493 (UniProtKB)
ISS
GO:0031941
P09493 (UniProtKB)
IEA
GO:0032059
P09493 (UniProtKB)
IMP
GO:0032587
P09493 (UniProtKB)
IDA
GO:0032781
P09493 (UniProtKB)
ISS
GO:0034614
P09493 (UniProtKB)
IEP
GO:0042060
P09493 (UniProtKB)
ISS
GO:0045214
P09493 (UniProtKB)
IMP
GO:0045785
P09493 (UniProtKB)
ISS
GO:0051496
P09493 (UniProtKB)
ISS
GO:0055010
P09493 (UniProtKB)
IMP
GO:0060048
P09493 (UniProtKB)
IMP
GO:1904706
P09493 (UniProtKB)
IMP
GO:1904753
P09493 (UniProtKB)
IMP

可能调控 TPM1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Cardiomyopathy, Dilated, 1y 0.36 2 13 CLINVAR_CTD_human_UNIPROT
CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3 (disorder) 0.36 4 14 CLINVAR_CTD_human_UNIPROT
Cardiomyopathy, Hypertrophic, Familial 0.247610304 19 5 BeFree_CLINVAR_CTD_human_LHGDN
Cardiomyopathies 0.127252986 19 6 BeFree_CLINVAR_GAD
Platelet mean volume finding 0.122367032 1 1 GAD_GWASCAT
Squamous cell carcinoma of esophagus 0.120271442 2 0 BeFree_CTD_human
Left ventricular noncompaction 0.120271442 1 0 BeFree_ORPHANET
Esophageal Neoplasms 0.12 1 0 CTD_human
Hypertensive disease 0.12 1 0 CTD_human
Keloid 0.12 1 0 CTD_human

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