VCL (vinculin)

symbol:
VCL
locus group:
protein-coding gene
location:
10q22.2
gene_family:
alias symbol:
None
alias name:
metavinculin
entrez id:
7414
ensembl gene id:
ENSG00000035403
ucsc gene id:
uc001jwd.4
refseq accession:
NM_003373|NM_014000
hgnc_id:
HGNC:12665
approved reserved:
1990-09-10
10q22.2
基因染色体位置图

VCL基因编码一种名为纽蛋白(Vinculin)的细胞骨架蛋白,属于纽蛋白家族(Vinculin family),该家族成员(如Meta-Vinculin)共同参与细胞黏附和细胞运动调控。纽蛋白是一种重要的细胞连接蛋白,主要分布于黏着斑(Focal adhesion,细胞与细胞外基质接触点)和细胞间连接处(如黏附连接Adherens junction),通过与肌动蛋白(Actin)及其他黏附蛋白(如Talin、α-辅肌动蛋白α-Actinin)结合,维持细胞形态、机械力传导和细胞迁移。其生物学功能包括稳定细胞骨架网络、介导机械信号传递(Mechanotransduction)以及调控细胞运动。VCL基因突变可能导致纽蛋白功能异常,与多种疾病相关,例如扩张型心肌病(突变削弱心肌细胞机械稳定性)、胃癌(突变影响细胞黏附)和侵袭性癌症(突变促进转移)。若VCL过表达,可能增强细胞黏附并抑制迁移,但某些肿瘤中反而会通过激活下游信号通路(如PI3K/AKT)促进转移;而表达降低则导致细胞连接松散、迁移能力异常增加,与肿瘤转移或伤口愈合障碍相关。纽蛋白家族共性为含有多个蛋白结合域(如头部和尾部结构域),通过构象变化(如头部与尾部自抑制状态的解除)调控其与配体的相互作用。专业术语解释:黏着斑(细胞与基质锚定的动态结构)、机械力传导(将物理力转化为生化信号的过程)、自抑制(蛋白域相互结合抑制自身活性的状态)。若译为"纽蛋白"不准确时,可备注Vinculin。

Vinculin is a cytoskeletal protein associated with cell-cell and cell-matrix junctions, where it is thought to function as one of several interacting proteins involved in anchoring F-actin to the membrane. Defects in VCL are the cause of cardiomyopathy dilated type 1W. Dilated cardiomyopathy is a disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Multiple alternatively spliced transcript variants have been found for this gene, but the biological validity of some variants has not been determined. [provided by RefSeq, Jul 2008]

None

VCL基因的碱基序列:[NCBI]
Loading Gene Browser...
VCL基因的碱基突变:           仅显示部分snp
rs8255       rs1049614       rs3037361       rs3829204       rs4746174       rs10824075       rs76454996       rs140046305       rs144240368       rs151279619       rs190121653       rs372750308       rs527598135       rs528707955       rs529763649       rs540882056       rs544380855      

VCL基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GCATTTATTAAGCATTCAGGCC
59
CCTAAGTAAGATACGAGCAGC
58
AGAGAAGCCTTCCAACCTC
59
AAGCTCATCTGTTAGTCGGAG
60
AAACATTTCCGACCCTGGA
59
CTCCCAGGATCCGATATCC
59
TTCAAACCACTGAGGATCAG
58
CTTACATCTGGGATCAGCG
58
GTTCAAACCACTGAGGATCAG
59
TTACATCTGGGATCAGCGG
59
AGAGAAGCCTTCCAACCTC
59
AAGCTCATCTGTTAGTCGGA
59
GAAACATTTCCGACCCTGG
59
CCCAGGATCCGATATCCTG
59
GCATTTATTAAGCATTCAGGCC
59
CTAAGTAAGATACGAGCAGCC
58
AAACATTTCCGACCCTGGA
59
TCCCAGGATCCGATATCCT
59
AGAAGCCTTCCAACCTCAG
59
GCAAGCTCATCTGTTAGTCG
59
      尚未收录相关数据

VCL基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

VCL基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0007155
A0A096LPE1 (UniProtKB)
IEA
GO:0051015
A0A096LPE1 (UniProtKB)
IEA
GO:0002009
P18206 (UniProtKB)
IMP
GO:0002162
P18206 (UniProtKB)
IPI
GO:0002576
P18206 (UniProtKB)
TAS
GO:0003779
P18206 (UniProtKB)
IDA
GO:0005198
P18206 (UniProtKB)
IEA
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005515
P18206 (UniProtKB)
IPI
GO:0005576
P18206 (UniProtKB)
TAS
GO:0005623
P18206 (UniProtKB)
ISS
GO:0005829
P18206 (UniProtKB)
TAS
GO:0005829
P18206 (UniProtKB)
TAS
GO:0005829
P18206 (UniProtKB)
TAS
GO:0005829
P18206 (UniProtKB)
TAS
GO:0005829
P18206 (UniProtKB)
TAS
GO:0005856
P18206 (UniProtKB)
TAS
GO:0005886
P18206 (UniProtKB)
ISS
GO:0005886
P18206 (UniProtKB)
ISS
GO:0005886
P18206 (UniProtKB)
ISS
GO:0005886
P18206 (UniProtKB)
IEA
GO:0005903
P18206 (UniProtKB)
ISS
GO:0005911
P18206 (UniProtKB)
ISS
GO:0005912
P18206 (UniProtKB)
ISS
GO:0005913
P18206 (UniProtKB)
IDA
GO:0005915
P18206 (UniProtKB)
ISS
GO:0005916
P18206 (UniProtKB)
IEA
GO:0005925
P18206 (UniProtKB)
ISS
GO:0005925
P18206 (UniProtKB)
IDA
GO:0005925
P18206 (UniProtKB)
IDA
GO:0005925
P18206 (UniProtKB)
IDA
GO:0006928
P18206 (UniProtKB)
TAS
GO:0006936
P18206 (UniProtKB)
TAS
GO:0007155
P18206 (UniProtKB)
TAS
GO:0007160
P18206 (UniProtKB)
TAS
GO:0008013
P18206 (UniProtKB)
ISS
GO:0015629
P18206 (UniProtKB)
IEA
GO:0030032
P18206 (UniProtKB)
ISS
GO:0030055
P18206 (UniProtKB)
NAS
GO:0030336
P18206 (UniProtKB)
TAS
GO:0031625
P18206 (UniProtKB)
IPI
GO:0034333
P18206 (UniProtKB)
IMP
GO:0034394
P18206 (UniProtKB)
IMP
GO:0043034
P18206 (UniProtKB)
ISS
GO:0043034
P18206 (UniProtKB)
IDA
GO:0043234
P18206 (UniProtKB)
IDA
GO:0043297
P18206 (UniProtKB)
IMP
GO:0045121
P18206 (UniProtKB)
IDA
GO:0045294
P18206 (UniProtKB)
IPI
GO:0045296
P18206 (UniProtKB)
ISS
GO:0048675
P18206 (UniProtKB)
IEA
GO:0070062
P18206 (UniProtKB)
IDA
GO:0070062
P18206 (UniProtKB)
IDA
GO:0070527
P18206 (UniProtKB)
IMP
GO:0090136
P18206 (UniProtKB)
IMP
GO:0090636
P18206 (UniProtKB)
ISS
GO:0090637
P18206 (UniProtKB)
ISS
GO:1903561
P18206 (UniProtKB)
IDA
GO:1990357
P18206 (UniProtKB)
ISS
GO:0003779
P18206 (UniProtKB)
IDA
GO:0005198
Q5JQ13 (UniProtKB)
IEA
GO:0005925
Q5JQ13 (UniProtKB)
IDA
GO:0007155
Q5JQ13 (UniProtKB)
IEA
GO:0015629
Q5JQ13 (UniProtKB)
IEA
GO:0051015
Q5JQ13 (UniProtKB)
IEA

可能调控 VCL基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 15 0.36 1 2 CLINVAR_CTD_human_UNIPROT
Cardiomyopathy, Dilated, 1w 0.36 1 9 CLINVAR_CTD_human_UNIPROT
Cardiomyopathies 0.121085767 4 3 BeFree_CLINVAR
Osteoporosis 0.12 1 0 CTD_human
Acute Coronary Syndrome 0.12 1 0 CTD_human
Hypertrophic Cardiomyopathy 0.005634266 3 0 BeFree_GAD_LHGDN
Cardiomyopathy, Dilated 0.004267125 8 1 BeFree_GAD
Neuroendocrine Tumors 0.002995792 1 0 BeFree_LHGDN
Cardiomegaly 0.00272435 1 0 LHGDN
Shigella Infections 0.000542884 2 0 BeFree

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