Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All AHDC1 0 genome.wustl.edu 37 1 27875711 27875711 + Frame_Shift_Del DEL G G - TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 1 27875711 27875711 G - DEL AHDC1 ENST00000247087 human ensembl 69_37n -1 known frame_shift_del c.2916 p.G973fs 0.041 NULL NULL - no_errors AHDC1 HGNC ENSG00000126705 22 0 0.00 4 2 33.33 - - - ATP1A4 0 genome.wustl.edu 37 1 160144388 160144388 + Missense_Mutation SNP C C T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 1 160144388 160144388 C T SNP ATP1A4 ENST00000368081 human ensembl 69_37n +1 known missense c.2162 p.T721I 0.999 pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr - no_errors ATP1A4 HGNC ENSG00000132681 106 1 0.93 31 35 53.03 - - - CLEC12A 0 genome.wustl.edu 37 12 10134654 10134654 + Silent SNP T T C TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 12 10134654 10134654 T C SNP CLEC12A ENST00000355690 human ensembl 69_37n +1 known silent c.597 p.Y199 0.826 pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin - no_errors CLEC12A HGNC ENSG00000172322 199 0 0.00 89 23 20.54 - - - CP 0 genome.wustl.edu 37 3 148896320 148896320 + Silent SNP A A G TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 3 148896320 148896320 A G SNP CP ENST00000264613 human ensembl 69_37n -1 known silent c.2760 p.F920 0.994 superfamily_Cupredoxin pfam_Cu-oxidase_2,pfam_Cu-oxidase_3,pfam_Cu-oxidase,superfamily_Cupredoxin - no_errors CP HGNC ENSG00000047457 229 0 0.00 190 71 27.20 - - - CSMD1 0 genome.wustl.edu 37 8 3076793 3076793 + Missense_Mutation SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 8 3076793 3076793 G A SNP CSMD1 ENST00000335551 human ensembl 69_37n -1 novel missense c.3097 p.R1033C 0.975 pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_CUB,pfscan_CUB,pfscan_Sushi_SCR_CCP - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region CSMD1 HGNC ENSG00000183117 110 0 0.00 38 15 28.30 - - - DCST1 0 genome.wustl.edu 37 1 155020578 155020578 + Nonsense_Mutation SNP A A T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 1 155020578 155020578 A T SNP DCST1 ENST00000295542 human ensembl 69_37n +1 known nonsense c.1801 p.K601* 1.000 NULL pfam_DC_STAMP-like,pfscan_Znf_RING - no_errors DCST1 HGNC ENSG00000163357 108 0 0.00 157 20 11.24 - - - EGR3 0 genome.wustl.edu 37 8 22548460 22548460 + Frame_Shift_Del DEL G G - TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 8 22548460 22548460 G - DEL EGR3 ENST00000317216 human ensembl 69_37n -1 known frame_shift_del c.690 p.I231fs 1.000 NULL pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors EGR3 HGNC ENSG00000179388 77 0 0.00 11 2 15.38 - - - ESYT1 0 genome.wustl.edu 37 12 56532266 56532266 + Missense_Mutation SNP C C T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 12 56532266 56532266 C T SNP ESYT1 ENST00000267113 human ensembl 69_37n +1 known missense c.2446 p.R816W 1.000 pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,prints_C2_dom,pfscan_C2_membr_targeting - no_errors ESYT1 HGNC ENSG00000139641 62 0 0.00 14 5 26.32 - - - GOLGA3 0 genome.wustl.edu 37 12 133393258 133393258 + Missense_Mutation SNP C C A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 12 133393258 133393258 C A SNP GOLGA3 ENST00000204726 human ensembl 69_37n -1 known missense c.274 p.D92Y 1.000 NULL superfamily_Prefoldin - no_errors GOLGA3 HGNC ENSG00000090615 101 0 0.00 18 9 33.33 - - - HEATR4 0 genome.wustl.edu 37 14 73989691 73989691 + Missense_Mutation SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 14 73989691 73989691 G A SNP HEATR4 ENST00000334988 human ensembl 69_37n -1 known missense c.166 p.R56C 0.000 NULL pfam_HEAT,superfamily_ARM-type_fold - no_errors HEATR4 HGNC ENSG00000187105 51 0 0.00 18 5 21.74 - - - HLA-DRB1 0 genome.wustl.edu 37 6 32552060 32552061 + Frame_Shift_Ins INS - - G TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 6 32552060 32552061 - G INS HLA-DRB1 ENST00000360004 human ensembl 69_37n -1 known frame_shift_ins c.196_195 p.S65fs 0.000:0.881 pfam_MHC_II_b_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like - no_errors HLA-DRB1 HGNC ENSG00000196126 53 0 0.00 9 2 18.18 - - - ID2 0 genome.wustl.edu 37 2 8822549 8822549 + Missense_Mutation SNP T T C TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 2 8822549 8822549 T C SNP ID2 ENST00000234091 human ensembl 69_37n +1 known missense c.254 p.I85T 0.814 superfamily_HLH_DNA-bd pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd - no_errors ID2 HGNC ENSG00000115738 36 0 0.00 7 4 36.36 - - - IKBKB 0 genome.wustl.edu 37 8 42151033 42151033 + Frame_Shift_Del DEL A A - TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 8 42151033 42151033 A - DEL IKBKB ENST00000342222 human ensembl 69_37n +1 known frame_shift_del c.391 p.K131fs 1.000 smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom - no_errors IKBKB HGNC ENSG00000104365 141 0 0.00 45 18 28.12 - - - IKBKB 0 genome.wustl.edu 37 8 42179428 42179428 + Missense_Mutation SNP G G T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 8 42179428 42179428 G T SNP IKBKB ENST00000520810 human ensembl 69_37n +1 known missense c.1703 p.R568M 1.000 NULL pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IKKbetaNEMObind,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ubiquitin_supergroup,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors IKBKB HGNC ENSG00000104365 258 0 0.00 178 73 29.08 - - - KCNH7 0 genome.wustl.edu 37 2 163256927 163256928 + Frame_Shift_Ins INS - - T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 2 163256927 163256928 - T INS KCNH7 ENST00000332142 human ensembl 69_37n -1 known frame_shift_ins c.2179_2178 p.L726fs 1.000:0.978 superfamily_cNMP-bd-like pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_Ion_trans_2,pfam_PAS_fold_3,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,tigrfam_PAS - no_errors KCNH7 HGNC ENSG00000184611 135 0 0.00 20 3 13.04 - - - KIR2DL4 0 genome.wustl.edu 37 19 55325455 55325455 + Silent SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 19 55325455 55325455 G A SNP KIR2DL4 ENST00000396284 human ensembl 69_37n +1 known silent c.1083 p.L361 0.001 NULL pfam_Immunoglobulin,smart_Ig_sub - no_errors KIR2DL4 HGNC ENSG00000189013 24 0 0.00 18 4 18.18 - - - LPP 0 genome.wustl.edu 37 3 188584034 188584034 + Missense_Mutation SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 3 188584034 188584034 G A SNP LPP ENST00000312675 human ensembl 69_37n +1 known missense c.1457 p.R486Q 1.000 pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM - no_errors LPP HGNC ENSG00000145012 156 0 0.00 24 11 31.43 - - - MUC20 0 genome.wustl.edu 37 3 195452668 195452668 + Silent SNP C C G TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 3 195452668 195452668 C G SNP MUC20 ENST00000447234 human ensembl 69_37n +1 known silent c.1194 p.P398 0.004 NULL NULL - no_errors MUC20 HGNC ENSG00000176945 50 0 0.00 12 6 33.33 - - - ODZ4 0 genome.wustl.edu 37 11 78780799 78780799 + Missense_Mutation SNP A A T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 11 78780799 78780799 A T SNP ODZ4 ENST00000278550 human ensembl 69_37n -1 known missense c.191 p.V64E 1.000 pfam_Ten_N pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core - no_errors ODZ4 HGNC ENSG00000149256 55 0 0.00 50 7 12.28 - - - PGAM1P5 0 genome.wustl.edu 37 12 96066487 96066487 + RNA SNP C C T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 12 96066487 96066487 C T SNP PGAM1P5 ENST00000552554 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors PGAM1P5 HGNC ENSG00000257150 37 0 0.00 21 11 34.38 - - - PIPSL 0 genome.wustl.edu 37 10 95720549 95720549 + RNA SNP T T C TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 10 95720549 95720549 T C SNP PIPSL ENST00000480546 human ensembl 69_37n -1 putative rna NULL NULL 1.000 - - - no_errors PIPSL HGNC ENSG00000180764 89 0 0.00 46 19 29.23 - - - RNA5-8SP6 0 genome.wustl.edu 37 Y 10037868 10037868 + RNA SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 Y 10037868 10037868 G A SNP RNA5-8SP6 ENST00000515896 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors RNA5-8SP6 HGNC ENSG00000251705 45 0 0.00 21 5 18.52 - - - RRP12 0 genome.wustl.edu 37 10 99130258 99130258 + Silent SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 10 99130258 99130258 G A SNP RRP12 ENST00000370992 human ensembl 69_37n -1 known silent c.2643 p.L881 1.000 superfamily_ARM-type_fold pfam_Uncharacterised_NUC173,superfamily_ARM-type_fold - no_errors RRP12 HGNC ENSG00000052749 65 0 0.00 23 9 28.12 - - - SEZ6L2 0 genome.wustl.edu 37 16 29888138 29888138 + Frame_Shift_Del DEL G G - TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 16 29888138 29888138 G - DEL SEZ6L2 ENST00000308713 human ensembl 69_37n -1 known frame_shift_del c.2043 p.D682fs 0.610 pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP pfam_Sushi_SCR_CCP,pfam_CUB,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP - no_errors SEZ6L2 HGNC ENSG00000174938 20 0 0.00 1 2 66.67 - - - SMARCA1 0 genome.wustl.edu 37 X 128614761 128614761 + Frame_Shift_Del DEL G G - TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 X 128614761 128614761 G - DEL SMARCA1 ENST00000371122 human ensembl 69_37n -1 known frame_shift_del c.2359 p.Q787fs 1.000 pfam_ATPase_nucl-remodel_HAND-dom,superfamily_ATPase_nucl-remodel_HAND-dom pfam_SNF2_N,pfam_SLIDE,pfam_ATPase_nucl-remodel_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Homeodomain-like,superfamily_ATPase_nucl-remodel_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors SMARCA1 HGNC ENSG00000102038 106 0 0.00 60 79 55.63 - - - STEAP2 0 genome.wustl.edu 37 7 89854877 89854879 + In_Frame_Del DEL GCC GCC - TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 GCC GCC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 7 89854877 89854879 GCC - DEL STEAP2 ENST00000287908 human ensembl 69_37n +1 known in_frame_del c.481_483 p.A161in_frame_del 1.000:1.000:1.000 NULL pfam_Fe3_Rdtase_TM_dom,pfam_NADP_OxRdtase_F420 - no_errors STEAP2 HGNC ENSG00000157214 39 0 0.00 13 3 17.65 - - - TBC1D8 0 genome.wustl.edu 37 2 101648789 101648789 + Nonsense_Mutation SNP C C T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 2 101648789 101648789 C T SNP TBC1D8 ENST00000409318 human ensembl 69_37n -1 known nonsense c.1877 p.W626* 1.000 pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom - no_errors TBC1D8 HGNC ENSG00000204634 100 0 0.00 23 4 14.81 - - - TCTE1 0 genome.wustl.edu 37 6 44250253 44250253 + Missense_Mutation SNP C C T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 6 44250253 44250253 C T SNP TCTE1 ENST00000371505 human ensembl 69_37n -1 known missense c.890 p.R297H 0.997 NULL smart_Leu-rich_rpt_RNase_inh_sub-typ - no_errors TCTE1 HGNC ENSG00000146221 111 0 0.00 22 8 26.67 - - - TSNARE1 0 genome.wustl.edu 37 8 143436021 143436021 + Missense_Mutation SNP G G A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 8 143436021 143436021 G A SNP TSNARE1 ENST00000307180 human ensembl 69_37n -1 known missense c.65 p.S22L 0.030 NULL pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom - no_errors TSNARE1 HGNC ENSG00000171045 36 0 0.00 11 6 35.29 - - - ZAN 0 genome.wustl.edu 37 7 100349612 100349612 + Silent SNP C C T TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 7 100349612 100349612 C T SNP ZAN ENST00000546292 human ensembl 69_37n +1 known silent c.1884 p.I628 0.000 NULL pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,pfscan_EG-like_dom,pfscan_MAM_dom - no_errors ZAN HGNC ENSG00000146839 887 0 0.00 540 259 32.42 - - - ZNF229 0 genome.wustl.edu 37 19 44936532 44936532 + Missense_Mutation SNP T T G TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 19 44936532 44936532 T G SNP ZNF229 ENST00000588931 human ensembl 69_37n -1 known missense c.103 p.S35R 0.640 pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF229 HGNC ENSG00000167383 161 0 0.00 54 24 30.77 - - - ZNF804B 0 genome.wustl.edu 37 7 88963520 88963521 + Frame_Shift_Ins INS - - A TCGA-A1-A0SM-01A-11D-A099-09 TCGA-A1-A0SM-10A-02D-A10G-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 2057b341-ff5c-45ef-83bb-005e29b2e740 e9a6364d-c86f-4656-9089-d0a59a87bd73 7 88963520 88963521 - A INS ZNF804B ENST00000333190 human ensembl 69_37n +1 known frame_shift_ins c.1224_1225 p.N408fs 0.001:0.001 NULL pfam_Znf_C2H2_jaz - no_errors ZNF804B HGNC ENSG00000182348 65 0 0.00 14 2 12.50 - - -