Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ADIPOQ 0 genome.wustl.edu 37 3 186572124 186572124 + Silent SNP C C T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 3 186572124 186572124 C T SNP ADIPOQ ENST00000320741 human ensembl 69_37n +1 known silent c.366 p.Y122 0.000 pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like,smart_C1q,prints_C1q,pfscan_C1q - no_errors ADIPOQ HGNC ENSG00000181092 28 0 0.00 27 5 15.62 - - - ARHGAP33 0 genome.wustl.edu 37 19 36273541 36273541 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 19 36273541 36273541 G T SNP ARHGAP33 ENST00000007510 human ensembl 69_37n +1 known missense c.1273 p.V425L 0.986 pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom - no_errors ARHGAP33 HGNC ENSG00000004777 25 0 0.00 25 14 35.00 - - - ARHGEF4 0 genome.wustl.edu 37 2 131673702 131673702 + Missense_Mutation SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 2 131673702 131673702 G A SNP ARHGEF4 ENST00000409359 human ensembl 69_37n +1 putative missense c.1193 p.S398N 0.002 NULL NULL - no_errors ARHGEF4 HGNC ENSG00000136002 12 0 0.00 2 4 66.67 - - - C10orf108 0 genome.wustl.edu 37 10 697170 697170 + Silent SNP A A G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 10 697170 697170 A G SNP C10orf108 ENST00000441152 human ensembl 69_37n +1 known silent c.663 p.Q221 0.000 NULL NULL - no_errors C10orf108 HGNC ENSG00000180525 17 0 0.00 8 4 33.33 - - - C18orf42 0 genome.wustl.edu 37 18 5145612 5145612 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 18 5145612 5145612 G T SNP C18orf42 ENST00000434239 human ensembl 69_37n -1 known missense c.159 p.D53E 0.004 NULL pfam_Kinase-A_anchor_RI-RII-bd_dom - no_errors C18orf42 HGNC ENSG00000231824 41 0 0.00 30 10 25.00 - - - CASQ2 0 genome.wustl.edu 37 1 116280880 116280880 + Missense_Mutation SNP T T C TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 1 116280880 116280880 T C SNP CASQ2 ENST00000261448 human ensembl 69_37n -1 known missense c.497 p.K166R 1.000 pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin - no_errors CASQ2 HGNC ENSG00000118729 51 0 0.00 31 11 26.19 - - - CDC27 0 genome.wustl.edu 37 17 45234397 45234397 + Missense_Mutation SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 17 45234397 45234397 G A SNP CDC27 ENST00000531206 human ensembl 69_37n -1 known missense c.724 p.P242S 1.000 NULL pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom - no_errors CDC27 HGNC ENSG00000004897 37 0 0.00 24 4 14.29 - - - CNTNAP3 0 genome.wustl.edu 37 9 39074000 39074000 + Missense_Mutation SNP C C A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 9 39074000 39074000 C A SNP CNTNAP3 ENST00000297668 human ensembl 69_37n -1 known missense c.3754 p.A1252S 1.000 NULL pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EGF-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G - no_errors CNTNAP3 HGNC ENSG00000106714 25 0 0.00 20 5 20.00 - - - CSH2 0 genome.wustl.edu 37 17 61949664 61949664 + Missense_Mutation SNP C C T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 17 61949664 61949664 C T SNP CSH2 ENST00000392886 human ensembl 69_37n -1 known missense c.476 p.R159H 0.895 pfam_Somatotropin,superfamily_4_helix_cytokine-like_core pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin - no_errors CSH2 HGNC ENSG00000213218 112 0 0.00 91 21 18.75 - - - DHDDS 0 genome.wustl.edu 37 1 26774101 26774101 + Missense_Mutation SNP T T A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 1 26774101 26774101 T A SNP DHDDS ENST00000360009 human ensembl 69_37n +1 known missense c.492 p.N164K 1.000 pfam_UPP_synth-like,superfamily_UPP_synth-like,tigrfam_UPP_synth-like pfam_UPP_synth-like,superfamily_UPP_synth-like,tigrfam_UPP_synth-like - no_errors DHDDS HGNC ENSG00000117682 28 0 0.00 27 7 20.59 - - - DHX57 0 genome.wustl.edu 37 2 39053707 39053707 + Missense_Mutation SNP T T A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 2 39053707 39053707 T A SNP DHX57 ENST00000295373 human ensembl 69_37n -1 known missense c.2764 p.I922F 1.000 pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors DHX57 HGNC ENSG00000163214 53 0 0.00 22 7 24.14 - - - DLG3 0 genome.wustl.edu 37 X 69712379 69712379 + Missense_Mutation SNP A A G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 X 69712379 69712379 A G SNP DLG3 ENST00000194900 human ensembl 69_37n +1 known missense c.1760 p.K587R 1.000 superfamily_SH3_domain,smart_SH3_domain,pirsf_M-assoc_guanylate_kinase,pfscan_SH3_domain pfam_Guanylate_kin,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin - no_errors DLG3 HGNC ENSG00000082458 40 0 0.00 41 5 10.87 - - - DOCK1 0 genome.wustl.edu 37 10 129202640 129202640 + Missense_Mutation SNP C C G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 10 129202640 129202640 C G SNP DOCK1 ENST00000280333 human ensembl 69_37n +1 known missense c.4006 p.P1336A 1.000 NULL pfam_DOCK,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c_dom,smart_SH3_domain,pfscan_SH3_domain - no_errors DOCK1 HGNC ENSG00000150760 52 0 0.00 35 13 27.08 - - - EMILIN2 0 genome.wustl.edu 37 18 2885065 2885065 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 18 2885065 2885065 G T SNP EMILIN2 ENST00000254528 human ensembl 69_37n +1 known missense c.361 p.G121C 1.000 NULL pfam_EMI_domain,pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,pfscan_EMI_domain - no_errors EMILIN2 HGNC ENSG00000132205 30 0 0.00 31 4 11.43 - - - FAM120B 0 genome.wustl.edu 37 6 170627674 170627674 + Missense_Mutation SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 6 170627674 170627674 G A SNP FAM120B ENST00000537664 human ensembl 69_37n +1 known missense c.1265 p.R422Q 0.000 NULL NULL - no_errors FAM120B HGNC ENSG00000112584 42 0 0.00 28 5 15.15 - - - FAM120B 0 genome.wustl.edu 37 6 170627691 170627691 + Missense_Mutation SNP T T A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 6 170627691 170627691 T A SNP FAM120B ENST00000537664 human ensembl 69_37n +1 known missense c.1282 p.S428T 0.000 NULL NULL - no_errors FAM120B HGNC ENSG00000112584 43 0 0.00 34 8 19.05 - - - GART 0 genome.wustl.edu 37 21 34889372 34889372 + Silent SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 21 34889372 34889372 G T SNP GART ENST00000381815 human ensembl 69_37n -1 known silent c.2031 p.A677 0.976 pfam_AIR_synth_C,superfamily_AIR_synth_C,tigrfam_PurM_cligase pfam_PRibGlycinamid_synth_ATP-grasp,pfam_Formyl_transf_N,pfam_PRibGlycinamide_synth_N,pfam_AIR_synth_C,pfam_PRibGlycinamide_synth_C-dom,pfam_AIR_synth,pfam_ATP-grasp_carboxylate-amine,pfam_CbamoylP_synth_lsu-like_ATP-bd,superfamily_Formyl_transf_N,superfamily_AIR_synth_C,superfamily_PurM_N-like,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,pfscan_ATP-grasp,tigrfam_PRibGlycinamide_synth,tigrfam_PurM_cligase,tigrfam_PurN_trans - no_errors GART HGNC ENSG00000159131 37 0 0.00 18 3 14.29 - - - HAP1 0 genome.wustl.edu 37 17 39883371 39883371 + Missense_Mutation SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 17 39883371 39883371 G A SNP HAP1 ENST00000310778 human ensembl 69_37n -1 known missense c.1457 p.T486M 0.099 NULL pfam_HAP1_N - no_errors HAP1 HGNC ENSG00000173805 24 0 0.00 15 6 28.57 - - - KIAA0368 0 genome.wustl.edu 37 9 114182309 114182309 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 9 114182309 114182309 G T SNP KIAA0368 ENST00000259335 human ensembl 69_37n -1 known missense c.2081 p.A694D 1.000 superfamily_ARM-type_fold superfamily_ARM-type_fold - no_errors KIAA0368 HGNC ENSG00000136813 31 0 0.00 21 4 16.00 - - - KLHL14 0 genome.wustl.edu 37 18 30260233 30260233 + Missense_Mutation SNP T T A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 18 30260233 30260233 T A SNP KLHL14 ENST00000359358 human ensembl 69_37n -1 known missense c.1487 p.D496V 1.000 pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like - no_errors KLHL14 HGNC ENSG00000197705 26 0 0.00 21 4 16.00 - - - LRBA 0 genome.wustl.edu 37 4 151231452 151231452 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 4 151231452 151231452 G T SNP LRBA ENST00000357115 human ensembl 69_37n -1 known missense c.7811 p.T2604N 1.000 superfamily_WD40_repeat_dom,smart_WD40_repeat pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom - no_errors LRBA HGNC ENSG00000198589 47 0 0.00 12 3 20.00 - - - MED13 0 genome.wustl.edu 37 17 60043939 60043939 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 17 60043939 60043939 G T SNP MED13 ENST00000397786 human ensembl 69_37n -1 known missense c.4265 p.A1422E 1.000 NULL pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun - no_errors MED13 HGNC ENSG00000108510 43 0 0.00 32 4 11.11 - - - MIER1 0 genome.wustl.edu 37 1 67450388 67450388 + Frame_Shift_Del DEL A A - TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 1 67450388 67450388 A - DEL MIER1 ENST00000401041 human ensembl 69_37n +1 known frame_shift_del c.1503 p.D502fs 0.338 NULL pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom - no_errors MIER1 HGNC ENSG00000198160 39 0 0.00 29 12 29.27 - - - MTMR4 0 genome.wustl.edu 37 17 56591766 56591766 + Missense_Mutation SNP C C G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 17 56591766 56591766 C G SNP MTMR4 ENST00000582390 human ensembl 69_37n -1 known missense c.3 p.M1I 1.000 NULL NULL - no_errors MTMR4 HGNC ENSG00000108389 22 0 0.00 21 7 24.14 - - - NACAD 0 genome.wustl.edu 37 7 45123881 45123881 + Missense_Mutation SNP C C T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 7 45123881 45123881 C T SNP NACAD ENST00000490531 human ensembl 69_37n -1 known missense c.1898 p.G633D 0.000 NULL pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx - no_errors NACAD HGNC ENSG00000136274 27 0 0.00 18 7 28.00 - - - NACAD 0 genome.wustl.edu 37 7 45123888 45123888 + Missense_Mutation SNP C C T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 7 45123888 45123888 C T SNP NACAD ENST00000490531 human ensembl 69_37n -1 known missense c.1891 p.E631K 0.010 NULL pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx - no_errors NACAD HGNC ENSG00000136274 29 0 0.00 18 6 25.00 - - - NRP2 0 genome.wustl.edu 37 2 206605294 206605294 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 2 206605294 206605294 G T SNP NRP2 ENST00000360409 human ensembl 69_37n +1 known missense c.1198 p.A400S 0.000 pirsf_Neuropilin,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom pirsf_Neuropilin,pfam_CUB,pfam_Coagulation_fac_5/8-C_type_dom,pfam_MAM_dom,pfam_Neuropilin1_C,superfamily_Galactose-bd-like,superfamily_CUB,superfamily_ConA-like_lec_gl,smart_CUB,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom - no_errors NRP2 HGNC ENSG00000118257 43 0 0.00 34 4 10.53 - - - PHLDB2 0 genome.wustl.edu 37 3 111604096 111604096 + Missense_Mutation SNP A A T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 3 111604096 111604096 A T SNP PHLDB2 ENST00000393925 human ensembl 69_37n +1 known missense c.1172 p.D391V 0.997 NULL pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology - no_errors PHLDB2 HGNC ENSG00000144824 30 0 0.00 25 5 16.67 - - - PIK3CA 0 genome.wustl.edu 37 3 178952085 178952085 + Missense_Mutation SNP A A G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 3 178952085 178952085 A G SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.3140 p.H1047R 1.000 superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 24 0 0.00 10 3 23.08 - - - PLCE1 0 genome.wustl.edu 37 10 95791183 95791183 + Missense_Mutation SNP A A G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 10 95791183 95791183 A G SNP PLCE1 ENST00000371380 human ensembl 69_37n +1 known missense c.380 p.N127S 0.278 NULL pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,smart_Ras-assoc,pfscan_C2_membr_targeting,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C - no_errors PLCE1 HGNC ENSG00000138193 24 0 0.00 8 4 33.33 - - - PPP1R42 0 genome.wustl.edu 37 8 67923049 67923049 + Missense_Mutation SNP C C A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 8 67923049 67923049 C A SNP PPP1R42 ENST00000522909 human ensembl 69_37n -1 known missense c.453 p.L151F 1.000 NULL pfam_Leu-rich_rpt - no_errors PPP1R42 HGNC ENSG00000178125 38 0 0.00 11 7 38.89 - - - RECQL4 0 genome.wustl.edu 37 8 145742025 145742025 + RNA SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 8 145742025 145742025 G A SNP RECQL4 ENST00000428558 human ensembl 69_37n -1 known rna NULL NULL 0.000 - - - no_errors RECQL4 HGNC ENSG00000160957 59 0 0.00 43 13 23.21 - - - RELL2 0 genome.wustl.edu 37 5 141017339 141017339 + RNA SNP A A C TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 5 141017339 141017339 A C SNP RELL2 ENST00000518025 human ensembl 69_37n +1 known rna NULL NULL 0.593 - - - no_errors RELL2 HGNC ENSG00000164620 9 0 0.00 9 12 57.14 - - - RNA5-8SP6 0 genome.wustl.edu 37 Y 10037835 10037835 + RNA SNP T T C TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 Y 10037835 10037835 T C SNP RNA5-8SP6 ENST00000515896 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors RNA5-8SP6 HGNC ENSG00000251705 42 0 0.00 36 5 12.20 - - - RNA5-8SP6 0 genome.wustl.edu 37 Y 10037863 10037863 + RNA DEL C C - TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 Y 10037863 10037863 C - DEL RNA5-8SP6 ENST00000515896 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors RNA5-8SP6 HGNC ENSG00000251705 25 0 0.00 15 4 13.33 - - - RSG1 0 genome.wustl.edu 37 1 16560107 16560107 + Missense_Mutation SNP C C T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 1 16560107 16560107 C T SNP RSG1 ENST00000375599 human ensembl 69_37n -1 known missense c.265 p.G89S 1.000 pfam_MIRO-like,pfam_Small_GTPase pfam_MIRO-like,pfam_Small_GTPase,prints_Small_GTPase - no_errors RSG1 HGNC ENSG00000132881 16 0 0.00 17 10 37.04 - - - SEC23A 0 genome.wustl.edu 37 14 39545203 39545203 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 14 39545203 39545203 G T SNP SEC23A ENST00000307712 human ensembl 69_37n -1 known missense c.923 p.T308K 1.000 pfam_Sec23/24_trunk_dom pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24 - no_errors SEC23A HGNC ENSG00000100934 47 0 0.00 30 4 11.76 - - - SLC25A3P1 0 genome.wustl.edu 37 1 53904350 53904350 + RNA SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 1 53904350 53904350 G T SNP SLC25A3P1 ENST00000566100 human ensembl 69_37n -1 known rna NULL NULL 1.000 - - - no_errors SLC25A3P1 HGNC ENSG00000236253 33 0 0.00 22 4 15.38 - - - TMPRSS3 0 genome.wustl.edu 37 21 43792094 43792094 + RNA SNP C C A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 21 43792094 43792094 C A SNP TMPRSS3 ENST00000474596 human ensembl 69_37n -1 putative rna NULL NULL 0.001 - - - no_errors TMPRSS3 HGNC ENSG00000160183 11 0 0.00 6 9 60.00 - - - TP53BP1 0 genome.wustl.edu 37 15 43748472 43748472 + Missense_Mutation SNP T T A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 15 43748472 43748472 T A SNP TP53BP1 ENST00000382044 human ensembl 69_37n -1 known missense c.2334 p.E778D 1.000 NULL pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom - no_errors TP53BP1 HGNC ENSG00000067369 27 0 0.00 16 4 20.00 - - - TTC40 0 genome.wustl.edu 37 10 134624471 134624471 + Silent SNP C C T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 10 134624471 134624471 C T SNP TTC40 ENST00000263170 human ensembl 69_37n -1 known silent c.2049 p.E683 0.000 NULL NULL - no_errors TTC40 HGNC ENSG00000171811 20 0 0.00 15 4 21.05 - - - TTN 0 genome.wustl.edu 37 2 179424989 179424989 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 2 179424989 179424989 G T SNP TTN ENST00000342992 human ensembl 69_37n -1 known missense c.78166 p.R26056S 1.000 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3 pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like - no_errors TTN HGNC ENSG00000155657 43 0 0.00 21 3 12.50 - - - VMP1 0 genome.wustl.edu 37 17 57915485 57915485 + RNA DEL C C - TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 17 57915485 57915485 C - DEL VMP1 ENST00000588617 human ensembl 69_37n +1 known rna NULL NULL 0.001 - - - no_errors VMP1 HGNC ENSG00000062716 16 0 0.00 3 2 22.22 - - - WLS 0 genome.wustl.edu 37 1 68603629 68603629 + RNA SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 1 68603629 68603629 G T SNP WLS ENST00000498615 human ensembl 69_37n -1 known rna NULL NULL 0.003 - - - no_errors WLS HGNC ENSG00000116729 27 0 0.00 27 4 12.90 - - - XPO4 0 genome.wustl.edu 37 13 21417130 21417130 + Silent SNP T T G TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 13 21417130 21417130 T G SNP XPO4 ENST00000255305 human ensembl 69_37n -1 known silent c.631 p.R211 0.997 superfamily_ARM-type_fold superfamily_ARM-type_fold - no_errors XPO4 HGNC ENSG00000132953 54 0 0.00 25 8 24.24 - - - ZC4H2 0 genome.wustl.edu 37 X 64137066 64137066 + RNA SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 X 64137066 64137066 G A SNP ZC4H2 ENST00000488608 human ensembl 69_37n -1 known rna NULL NULL 0.000 - - - no_errors ZC4H2 HGNC ENSG00000126970 8 0 0.00 4 4 50.00 - - - ZFYVE28 0 genome.wustl.edu 37 4 2307064 2307064 + Missense_Mutation SNP T T C TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 4 2307064 2307064 T C SNP ZFYVE28 ENST00000290974 human ensembl 69_37n -1 known missense c.1003 p.M335V 1.000 NULL pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel - no_errors ZFYVE28 HGNC ENSG00000159733 29 0 0.00 9 8 47.06 - - - ZNF311 0 genome.wustl.edu 37 6 28966539 28966539 + Missense_Mutation SNP G G T TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 6 28966539 28966539 G T SNP ZNF311 ENST00000377179 human ensembl 69_37n -1 known missense c.387 p.D129E 0.001 pfscan_Krueppel-associated_box pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF311 HGNC ENSG00000197935 31 0 0.00 29 4 12.12 - - - ZNF790 0 genome.wustl.edu 37 19 37310012 37310012 + Missense_Mutation SNP G G A TCGA-A7-A425-01A-11D-A243-09 TCGA-A7-A425-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c67181dd-3934-4e63-b0b0-ddb61a5d1306 1a65e4d5-1db5-44b8-8c9c-c014a6e22760 19 37310012 37310012 G A SNP ZNF790 ENST00000356725 human ensembl 69_37n -1 known missense c.1234 p.H412Y 0.748 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF790 HGNC ENSG00000197863 54 0 0.00 27 7 20.59 - - -