Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ABT1 0 genome.wustl.edu 37 6 26598210 26598210 + Missense_Mutation SNP G G T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 6 26598210 26598210 G T SNP ABT1 ENST00000274849 human ensembl 69_37n +1 known missense c.310 p.D104Y 1.000 NULL NULL - no_errors ABT1 HGNC ENSG00000146109 28 0 0.00 21 11 34.38 - - - ACVR2A 0 genome.wustl.edu 37 2 148680662 148680662 + Missense_Mutation SNP C C T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 2 148680662 148680662 C T SNP ACVR2A ENST00000241416 human ensembl 69_37n +1 known missense c.1198 p.R400C 1.000 pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt - no_errors ACVR2A HGNC ENSG00000121989 86 0 0.00 100 55 35.48 - - - AOX1 0 genome.wustl.edu 37 2 201523988 201523988 + Missense_Mutation SNP T T A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 2 201523988 201523988 T A SNP AOX1 ENST00000374700 human ensembl 69_37n +1 known missense c.3272 p.V1091E 0.997 pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase - no_errors AOX1 HGNC ENSG00000138356 105 0 0.00 79 36 31.30 - - - ATIC 0 genome.wustl.edu 37 2 216177253 216177253 + Missense_Mutation SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 2 216177253 216177253 G A SNP ATIC ENST00000236959 human ensembl 69_37n +1 known missense c.52 p.V18M 0.994 pfam_MGS-like_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas pfam_AICARFT_IMPCHas,pfam_MGS-like_dom,superfamily_Cytidine_deaminase-like,superfamily_MGS-like_dom,smart_MGS-like_dom,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas - no_errors ATIC HGNC ENSG00000138363 150 0 0.00 90 50 35.71 - - - ATP9A 0 genome.wustl.edu 37 20 50287755 50287755 + Nonsense_Mutation SNP C C T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 20 50287755 50287755 C T SNP ATP9A ENST00000338821 human ensembl 69_37n -1 known nonsense c.1079 p.W360* 1.000 tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr - no_errors ATP9A HGNC ENSG00000054793 84 0 0.00 74 32 30.19 - - - BRAT1 0 genome.wustl.edu 37 7 2578238 2578238 + Missense_Mutation SNP C C T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 7 2578238 2578238 C T SNP BRAT1 ENST00000340611 human ensembl 69_37n -1 known missense c.1931 p.R644Q 0.045 superfamily_ARM-type_fold pfam_HEAT,superfamily_ARM-type_fold - no_errors BRAT1 HGNC ENSG00000106009 8 0 0.00 6 5 45.45 - - - C18orf54 0 genome.wustl.edu 37 18 51889197 51889197 + Missense_Mutation SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 18 51889197 51889197 G A SNP C18orf54 ENST00000300091 human ensembl 69_37n +1 known missense c.646 p.E216K 0.811 NULL NULL - no_errors C18orf54 HGNC ENSG00000166845 161 0 0.00 125 42 25.15 - - - CRHR2 0 genome.wustl.edu 37 7 30704716 30704716 + Silent SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 7 30704716 30704716 G A SNP CRHR2 ENST00000348438 human ensembl 69_37n -1 known silent c.594 p.L198 1.000 pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF2_rcpt pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF2_rcpt,prints_GPCR_2_diuretic_rcpt - no_errors CRHR2 HGNC ENSG00000106113 65 0 0.00 53 25 32.05 - - - INO80 0 genome.wustl.edu 37 15 41275191 41275191 + Missense_Mutation SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 15 41275191 41275191 G A SNP INO80 ENST00000361937 human ensembl 69_37n -1 known missense c.4322 p.A1441V 1.000 NULL pfam_SNF2_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors INO80 HGNC ENSG00000128908 25 0 0.00 32 14 30.43 - - - MAP3K1 0 genome.wustl.edu 37 5 56155725 56155726 + Frame_Shift_Del DEL AG AG - TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 AG AG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 5 56155725 56155726 AG - DEL MAP3K1 ENST00000399503 human ensembl 69_37n +1 novel frame_shift_del c.817_818 p.R273fs 0.959:0.996 NULL pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom - no_errors MAP3K1 HGNC ENSG00000095015 49 0 0.00 42 18 30.00 - - - NT5DC3 0 genome.wustl.edu 37 12 104208866 104208866 + Missense_Mutation SNP T T A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 12 104208866 104208866 T A SNP NT5DC3 ENST00000392876 human ensembl 69_37n -1 known missense c.242 p.N81I 1.000 superfamily_HAD-like_dom,pirsf_Pur_nucleotidase pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl - no_errors NT5DC3 HGNC ENSG00000111696 125 0 0.00 120 52 30.23 - - - PDZRN3 0 genome.wustl.edu 37 3 73433946 73433946 + Missense_Mutation SNP C C T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 3 73433946 73433946 C T SNP PDZRN3 ENST00000263666 human ensembl 69_37n -1 known missense c.1771 p.D591N 1.000 NULL pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF - no_errors PDZRN3 HGNC ENSG00000121440 51 0 0.00 68 32 32.00 - - - PHLDB1 0 genome.wustl.edu 37 11 118486807 118486807 + Missense_Mutation SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 11 118486807 118486807 G A SNP PHLDB1 ENST00000361417 human ensembl 69_37n +1 known missense c.236 p.G79D 1.000 superfamily_SMAD_FHA_domain pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology - no_errors PHLDB1 HGNC ENSG00000019144 55 0 0.00 46 12 20.69 - - - PIK3CA 0 genome.wustl.edu 37 3 178936091 178936091 + Missense_Mutation SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 3 178936091 178936091 G A SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.1633 p.E545K 1.000 pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 117 0 0.00 104 39 27.27 - - - PTPRM 0 genome.wustl.edu 37 18 8088802 8088802 + Missense_Mutation SNP C C T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 18 8088802 8088802 C T SNP PTPRM ENST00000583289 human ensembl 69_37n +1 novel missense c.227 p.P76L 0.007 superfamily_Fibronectin_type3 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3 - no_start_codon:pseudogene:no_stop_codon PTPRM HGNC ENSG00000173482 148 0 0.00 147 44 23.04 - - - RCSD1 0 genome.wustl.edu 37 1 167667018 167667018 + Missense_Mutation SNP G G T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 1 167667018 167667018 G T SNP RCSD1 ENST00000367854 human ensembl 69_37n +1 known missense c.1157 p.G386V 0.000 NULL pfam_RCSD - no_errors RCSD1 HGNC ENSG00000198771 24 0 0.00 25 6 19.35 - - - ROR1 0 genome.wustl.edu 37 1 64643303 64643303 + Missense_Mutation SNP A A C TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 1 64643303 64643303 A C SNP ROR1 ENST00000371079 human ensembl 69_37n +1 known missense c.1579 p.M527L 0.865 pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like - no_errors ROR1 HGNC ENSG00000185483 89 0 0.00 64 36 36.00 - - - SH3PXD2B 0 genome.wustl.edu 37 5 171766645 171766645 + Missense_Mutation SNP C C A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 5 171766645 171766645 C A SNP SH3PXD2B ENST00000311601 human ensembl 69_37n -1 known missense c.1464 p.W488C 1.000 NULL pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain - no_errors SH3PXD2B HGNC ENSG00000174705 62 0 0.00 49 30 37.97 - - - SLC25A2 0 genome.wustl.edu 37 5 140682837 140682837 + Missense_Mutation SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 5 140682837 140682837 G A SNP SLC25A2 ENST00000239451 human ensembl 69_37n -1 known missense c.596 p.A199V 0.995 pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier - no_errors SLC25A2 HGNC ENSG00000120329 117 0 0.00 98 45 31.47 - - - SLC44A2 0 genome.wustl.edu 37 19 10742416 10742416 + Missense_Mutation SNP A A G TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 19 10742416 10742416 A G SNP SLC44A2 ENST00000335757 human ensembl 69_37n +1 known missense c.617 p.E206G 1.000 NULL pfam_Choline_transptr-like - no_errors SLC44A2 HGNC ENSG00000129353 59 0 0.00 69 40 36.70 - - - SLC4A11 0 genome.wustl.edu 37 20 3214874 3214874 + Silent SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 20 3214874 3214874 G A SNP SLC4A11 ENST00000380059 human ensembl 69_37n -1 known silent c.507 p.N169 0.722 superfamily_PTrfase/Anion_transptr pfam_HCO3_transpt_C,pfam_PTS_EIIA_2,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk - no_errors SLC4A11 HGNC ENSG00000088836 71 0 0.00 74 41 35.65 - - - SPDYE6 0 genome.wustl.edu 37 7 102296747 102296747 + Silent SNP G G A TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 7 102296747 102296747 G A SNP SPDYE6 ENST00000436228 human ensembl 69_37n +1 known silent c.663 p.S221 0.086 pfam_Cell_cycle_regulatory_Spy1 pfam_Cell_cycle_regulatory_Spy1 - no_errors SPDYE6 HGNC ENSG00000173678 39 0 0.00 35 4 10.26 - - - TAF3 0 genome.wustl.edu 37 10 8006100 8006103 + Frame_Shift_Del DEL ATTG ATTG - TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 ATTG ATTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 10 8006100 8006103 ATTG - DEL TAF3 ENST00000344293 human ensembl 69_37n +1 known frame_shift_del c.627_630 p.L210fs 0.166:0.220:0.877:0.928 NULL pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger - no_errors TAF3 HGNC ENSG00000165632 50 0 0.00 43 24 32.88 - - - THNSL2 0 genome.wustl.edu 37 2 88482500 88482500 + Frame_Shift_Del DEL C C - TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 2 88482500 88482500 C - DEL THNSL2 ENST00000324166 human ensembl 69_37n +1 known frame_shift_del c.985 p.L329fs 1.000 pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,tigrfam_Thr_synthase pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,tigrfam_Thr_synthase - no_errors THNSL2 HGNC ENSG00000144115 82 0 0.00 88 26 22.41 - - - TNFRSF8 0 genome.wustl.edu 37 1 12157238 12157238 + Missense_Mutation SNP G G T TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 1 12157238 12157238 G T SNP TNFRSF8 ENST00000263932 human ensembl 69_37n +1 known missense c.232 p.A78S 0.000 pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_8 - no_errors TNFRSF8 HGNC ENSG00000120949 115 0 0.00 95 47 32.87 - - - XRCC6BP1 0 genome.wustl.edu 37 12 58339430 58339430 + Frame_Shift_Del DEL G G - TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 12 58339430 58339430 G - DEL XRCC6BP1 ENST00000300145 human ensembl 69_37n +1 known frame_shift_del c.207 p.D71fs 0.001 pfam_Peptidase_M76_ATP23 pfam_Peptidase_M76_ATP23 - no_errors XRCC6BP1 HGNC ENSG00000166896 266 0 0.00 231 89 27.22 - - - XRCC6BP1 0 genome.wustl.edu 37 12 58339432 58339432 + Frame_Shift_Del DEL T T - TCGA-AN-A0XS-01A-22D-A10G-09 TCGA-AN-A0XS-10A-01D-A10G-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx f1b5268d-556f-404f-a956-770df4a1e7aa 3a722354-b991-44cf-9ab8-f276b4a38701 12 58339432 58339432 T - DEL XRCC6BP1 ENST00000300145 human ensembl 69_37n +1 known frame_shift_del c.209 p.D71fs 0.993 pfam_Peptidase_M76_ATP23 pfam_Peptidase_M76_ATP23 - no_errors XRCC6BP1 HGNC ENSG00000166896 270 0 0.00 233 89 27.05 - - -