Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ALOX5 0 genome.wustl.edu 37 10 45878089 45878089 + Nonsense_Mutation SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 10 45878089 45878089 G A SNP ALOX5 ENST00000374391 human ensembl 69_37n +1 known nonsense c.309 p.W103* 1.000 pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2 pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,prints_LipOase_mml,prints_LipOase_C,pfscan_LipOase_LH2 - no_errors ALOX5 HGNC ENSG00000012779 94 0 0.00 37 20 35.09 - - - BRSK2 0 genome.wustl.edu 37 11 1466879 1466880 + Frame_Shift_Ins INS - - C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 11 1466879 1466880 - C INS BRSK2 ENST00000382179 human ensembl 69_37n +1 known frame_shift_ins c.1194_1195 p.R400fs 0.972:1.000 superfamily_Kinase-like_dom pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom - no_errors BRSK2 HGNC ENSG00000174672 24 0 0.00 16 3 15.79 - - - CPAMD8 0 genome.wustl.edu 37 19 17032750 17032750 + Missense_Mutation SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 19 17032750 17032750 G A SNP CPAMD8 ENST00000443236 human ensembl 69_37n -1 known missense c.3767 p.A1256V 0.986 pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Prot_inh_Kazal - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region CPAMD8 HGNC ENSG00000160111 45 0 0.00 46 39 45.88 - - - CRIPAK 0 genome.wustl.edu 37 4 1388790 1388790 + Missense_Mutation SNP T T C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 4 1388790 1388790 T C SNP CRIPAK ENST00000324803 human ensembl 69_37n +1 known missense c.491 p.V164A 0.000 NULL smart_Post-SET_dom - no_errors CRIPAK HGNC ENSG00000179979 14 0 0.00 5 9 64.29 - - - FAM205A 0 genome.wustl.edu 37 9 34723329 34723329 + Missense_Mutation SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 9 34723329 34723329 G A SNP FAM205A ENST00000378788 human ensembl 69_37n -1 novel missense c.3908 p.S1303F 0.029 NULL NULL - no_errors FAM205A HGNC ENSG00000205108 76 0 0.00 42 40 48.78 - - - FCGBP 0 genome.wustl.edu 37 19 40383820 40383820 + Missense_Mutation SNP C C T TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 19 40383820 40383820 C T SNP FCGBP ENST00000221347 human ensembl 69_37n -1 known missense c.9790 p.G3264S 0.796 smart_VWC_out,smart_VWF_type-D pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out - no_errors FCGBP HGNC ENSG00000090920 21 0 0.00 42 13 23.64 - - - G6PC2 0 genome.wustl.edu 37 2 169757925 169757925 + Missense_Mutation SNP T T A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 2 169757925 169757925 T A SNP G6PC2 ENST00000375363 human ensembl 69_37n +1 known missense c.84 p.F28L 1.000 superfamily_P_Acid_Pase_2/haloperoxidase,pirsf_Glucose-6-phosphatase pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase,pirsf_Glucose-6-phosphatase - no_errors G6PC2 HGNC ENSG00000152254 421 0 0.00 116 130 52.85 - - - HECTD4 0 genome.wustl.edu 37 12 112623045 112623046 + Frame_Shift_Ins INS - - C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 12 112623045 112623046 - C INS HECTD4 ENST00000377560 human ensembl 69_37n -1 known frame_shift_ins c.9209_9208 p.A3070fs 0.000:0.001 NULL pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl,smart_HECT,pfscan_HECT - no_errors HECTD4 HGNC ENSG00000173064 14 0 0.00 15 3 16.67 - - - HRNR 0 genome.wustl.edu 37 1 152186708 152186708 + Missense_Mutation SNP C C T TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 1 152186708 152186708 C T SNP HRNR ENST00000368801 human ensembl 69_37n -1 known missense c.7397 p.R2466H 0.000 NULL pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2 - no_errors HRNR HGNC ENSG00000197915 37 0 0.00 22 3 12.00 - - - INTS10 0 genome.wustl.edu 37 8 19679949 19679949 + Splice_Site SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 8 19679949 19679949 G A SNP INTS10 ENST00000397977 human ensembl 69_37n +1 known splice_site c.442-1 e5-1 1.000 - - - no_errors INTS10 HGNC ENSG00000104613 182 0 0.00 76 41 35.04 - - - KCNH7 0 genome.wustl.edu 37 2 163302895 163302895 + Missense_Mutation SNP T T C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 2 163302895 163302895 T C SNP KCNH7 ENST00000332142 human ensembl 69_37n -1 known missense c.1187 p.N396S 1.000 NULL pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_Ion_trans_2,pfam_PAS_fold_3,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,tigrfam_PAS - no_errors KCNH7 HGNC ENSG00000184611 135 0 0.00 88 36 29.03 - - - KRT79 0 genome.wustl.edu 37 12 53215777 53215778 + Frame_Shift_Ins INS - - C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 12 53215777 53215778 - C INS KRT79 ENST00000330553 human ensembl 69_37n -1 known frame_shift_ins c.1487_1486 p.A496fs 0.000:0.000 NULL pfam_F,superfamily_STAT_TF_coiled-coil,prints_Keratin_II - no_errors KRT79 HGNC ENSG00000185640 64 0 0.00 70 9 11.39 - - - KSR1 0 genome.wustl.edu 37 17 25910015 25910016 + Frame_Shift_Ins INS - - C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 17 25910015 25910016 - C INS KSR1 ENST00000319524 human ensembl 69_37n +1 known frame_shift_ins c.864_865 p.P291fs 0.261:0.999 NULL pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors KSR1 HGNC ENSG00000141068 21 0 0.00 26 3 10.34 - - - LRP1 0 genome.wustl.edu 37 12 57597181 57597182 + Frame_Shift_Ins INS - - C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 12 57597181 57597182 - C INS LRP1 ENST00000243077 human ensembl 69_37n +1 known frame_shift_ins c.10828_10829 p.R3612fs 0.495:0.403 pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt - no_errors LRP1 HGNC ENSG00000123384 28 0 0.00 17 2 10.53 - - - MAP3K1 0 genome.wustl.edu 37 5 56178637 56178638 + Frame_Shift_Del DEL AT AT - TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 AT AT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 5 56178637 56178638 AT - DEL MAP3K1 ENST00000399503 human ensembl 69_37n +1 novel frame_shift_del c.3610_3611 p.I1204fs 0.050:0.201 NULL pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom - no_errors MAP3K1 HGNC ENSG00000095015 164 0 0.00 77 54 40.60 - - - NCSTN 0 genome.wustl.edu 37 1 160323977 160323977 + Missense_Mutation SNP A A G TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 1 160323977 160323977 A G SNP NCSTN ENST00000294785 human ensembl 69_37n +1 known missense c.1249 p.N417D 0.000 pfam_Nicastrin pfam_Nicastrin - no_errors NCSTN HGNC ENSG00000162736 274 0 0.00 191 135 40.91 - - - PCNXL2 0 genome.wustl.edu 37 1 233134902 233134902 + Missense_Mutation SNP C C T TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 1 233134902 233134902 C T SNP PCNXL2 ENST00000258229 human ensembl 69_37n -1 known missense c.5552 p.G1851E 1.000 NULL pfam_Pecanex,superfamily_Pept_cys/ser_Trypsin-like - no_errors PCNXL2 HGNC ENSG00000135749 261 0 0.00 141 99 41.25 - - - PGBD2 0 genome.wustl.edu 37 1 249210906 249210906 + Silent SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 1 249210906 249210906 G A SNP PGBD2 ENST00000329291 human ensembl 69_37n +1 known silent c.123 p.E41 0.748 NULL NULL - no_errors PGBD2 HGNC ENSG00000185220 148 0 0.00 116 56 32.56 - - - PGR 0 genome.wustl.edu 37 11 100996740 100996741 + Frame_Shift_Ins INS - - C TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 11 100996740 100996741 - C INS PGR ENST00000325455 human ensembl 69_37n -1 known frame_shift_ins c.1787_1786 p.E596fs 1.000:1.000 pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt pfam_Progest_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Progest_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt - no_errors PGR HGNC ENSG00000082175 159 0 0.00 12 21 63.64 - - - PIK3CA 0 genome.wustl.edu 37 3 178936094 178936094 + Missense_Mutation SNP C C A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 3 178936094 178936094 C A SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.1636 p.Q546K 1.000 pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 138 0 0.00 65 46 41.44 - - - PLXNA1 0 genome.wustl.edu 37 3 126752825 126752825 + Missense_Mutation SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 3 126752825 126752825 G A SNP PLXNA1 ENST00000393409 human ensembl 69_37n +1 known missense c.5656 p.E1886K 1.000 NULL pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semaphorin/CD100_Ag,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag - no_errors PLXNA1 HGNC ENSG00000114554 12 0 0.00 7 4 36.36 - - - PRSS42 0 genome.wustl.edu 37 3 46873464 46873464 + Missense_Mutation SNP A A G TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 3 46873464 46873464 A G SNP PRSS42 ENST00000429665 human ensembl 69_37n -1 known missense c.694 p.C232R 0.599 pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6 pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6 - no_errors PRSS42 HGNC ENSG00000178055 102 0 0.00 40 39 48.75 - - - SH3BP4 0 genome.wustl.edu 37 2 235950945 235950945 + Missense_Mutation SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 2 235950945 235950945 G A SNP SH3BP4 ENST00000344528 human ensembl 69_37n +1 known missense c.1532 p.R511H 0.998 NULL pfam_SH3_2,pfam_SH3_domain,pfam_ZU5,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain - no_errors SH3BP4 HGNC ENSG00000130147 89 0 0.00 46 21 31.34 - - - STOX1 0 genome.wustl.edu 37 10 70644128 70644128 + Silent SNP C C T TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b 10 70644128 70644128 C T SNP STOX1 ENST00000298596 human ensembl 69_37n +1 known silent c.576 p.Y192 1.000 NULL pfam_Storkhead-box_winged-helix - no_errors STOX1 HGNC ENSG00000165730 44 0 0.00 26 14 35.00 - - - TRMT2B 0 genome.wustl.edu 37 X 100275554 100275554 + Nonsense_Mutation SNP G G A TCGA-AO-A0J7-01A-11W-A050-09 TCGA-AO-A0J7-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a53056d9-e8bd-4cb1-ad67-85879ccc925d 30586533-e188-4eb3-8ffd-0ce7c98a1b6b X 100275554 100275554 G A SNP TRMT2B ENST00000372935 human ensembl 69_37n -1 known nonsense c.1090 p.Q364* 0.184 pfam_U5_MeTrfase,pfam_Small_mtfrase_dom pfam_U5_MeTrfase,pfam_Small_mtfrase_dom - no_errors TRMT2B HGNC ENSG00000188917 200 1 0.50 130 99 43.23 - - -