Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All C1orf101 0 genome.wustl.edu 37 1 244735950 244735950 + Missense_Mutation SNP C C A TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 1 244735950 244735950 C A SNP C1orf101 ENST00000366534 human ensembl 69_37n +1 known missense c.1826 p.T609N 0.407 NULL NULL - no_errors C1orf101 HGNC ENSG00000179397 99 0 0.00 98 17 14.78 - - - ESF1 0 genome.wustl.edu 37 20 13753198 13753198 + Missense_Mutation SNP G G C TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 20 13753198 13753198 G C SNP ESF1 ENST00000202816 human ensembl 69_37n -1 known missense c.1213 p.L405V 1.000 NULL pfam_NUC153 - no_errors ESF1 HGNC ENSG00000089048 336 0 0.00 177 47 20.98 - - - FAM46D 0 genome.wustl.edu 37 X 79698447 79698447 + Missense_Mutation SNP G G T TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 X 79698447 79698447 G T SNP FAM46D ENST00000308293 human ensembl 69_37n +1 known missense c.409 p.V137F 1.000 pfam_DUF1693 pfam_DUF1693 - no_errors FAM46D HGNC ENSG00000174016 99 0 0.00 43 25 36.76 - - - HRNR 0 genome.wustl.edu 37 1 152189237 152189237 + Missense_Mutation SNP C C G TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 1 152189237 152189237 C G SNP HRNR ENST00000368801 human ensembl 69_37n -1 known missense c.4868 p.S1623T 0.000 NULL pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2 - no_errors HRNR HGNC ENSG00000197915 16 0 0.00 11 6 35.29 - - - KCNIP1 0 genome.wustl.edu 37 5 170145803 170145803 + Missense_Mutation SNP C C T TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 5 170145803 170145803 C T SNP KCNIP1 ENST00000411494 human ensembl 69_37n +1 known missense c.136 p.R46W 1.000 prints_Recoverin pfam_EF-hand,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_Ca-bd,prints_Recoverin,pfscan_EF_HAND_2 - no_errors KCNIP1 HGNC ENSG00000182132 68 0 0.00 29 11 27.50 - - - LINC00207 0 genome.wustl.edu 37 22 44967346 44967346 + Silent SNP G G A TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 22 44967346 44967346 G A SNP LINC00207 ENST00000334566 human ensembl 69_37n +1 putative silent c.216 p.T72 0.049 NULL NULL - no_errors LINC00207 HGNC ENSG00000187012 132 0 0.00 75 32 29.91 - - - NRIP1 0 genome.wustl.edu 37 21 16339800 16339801 + Frame_Shift_Ins INS - - G TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 21 16339800 16339801 - G INS NRIP1 ENST00000318948 human ensembl 69_37n -1 known frame_shift_ins c.714_713 p.R239fs 0.305:0.998 NULL NULL - no_errors NRIP1 HGNC ENSG00000180530 225 0 0.00 137 40 22.60 - - - PIK3CA 0 genome.wustl.edu 37 3 178921553 178921553 + Missense_Mutation SNP T T A TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 3 178921553 178921553 T A SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.1035 p.N345K 1.000 superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 77 0 0.00 34 10 22.73 - - - PREX2 0 genome.wustl.edu 37 8 69046352 69046352 + Silent SNP C C T TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 8 69046352 69046352 C T SNP PREX2 ENST00000288368 human ensembl 69_37n +1 known silent c.3825 p.V1275 1.000 NULL pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain - no_errors PREX2 HGNC ENSG00000046889 89 0 0.00 53 21 28.38 - - - RPRD1A 0 genome.wustl.edu 37 18 33647353 33647353 + Silent SNP A A G TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 18 33647353 33647353 A G SNP RPRD1A ENST00000357384 human ensembl 69_37n -1 known silent c.15 p.S5 0.405 superfamily_ENTH_VHS pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_RNA_polymerase_II_lsu_CTD - no_errors RPRD1A HGNC ENSG00000141425 95 0 0.00 43 22 33.33 - - - SLC30A1 0 genome.wustl.edu 37 1 211749347 211749347 + Missense_Mutation SNP C C G TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 1 211749347 211749347 C G SNP SLC30A1 ENST00000367001 human ensembl 69_37n -1 known missense c.907 p.A303P 0.005 pfam_Cation_efflux pfam_Cation_efflux,tigrfam_Cation_efflux - no_errors SLC30A1 HGNC ENSG00000170385 113 0 0.00 96 18 15.79 - - - SULT1A4 0 genome.wustl.edu 37 16 29472811 29472811 + Silent SNP A A G TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 16 29472811 29472811 A G SNP SULT1A4 ENST00000565290 human ensembl 69_37n +1 known silent c.105 p.Q35 0.951 NULL pfam_Sulfotransferase_dom - no_errors SULT1A4 HGNC ENSG00000213648 8 0 0.00 5 7 58.33 - - - TCERG1L 0 genome.wustl.edu 37 10 132961403 132961403 + Missense_Mutation SNP G G C TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 10 132961403 132961403 G C SNP TCERG1L ENST00000368642 human ensembl 69_37n -1 known missense c.1016 p.P339R 0.896 NULL pfam_FF_domain,pfam_WW_Rsp5_WWP,superfamily_FF_domain,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,smart_FF_domain,pfscan_WW_Rsp5_WWP - no_errors TCERG1L HGNC ENSG00000176769 100 0 0.00 40 15 27.27 - - - USP48 0 genome.wustl.edu 37 1 22021710 22021710 + Missense_Mutation SNP T T C TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 1 22021710 22021710 T C SNP USP48 ENST00000308271 human ensembl 69_37n -1 known missense c.2732 p.N911S 1.000 NULL pfam_Peptidase_C19,pfscan_Peptidase_C19,pfscan_Ubiquitin_supergroup - no_errors USP48 HGNC ENSG00000090686 178 0 0.00 122 39 24.22 - - - ZBTB32 0 genome.wustl.edu 37 19 36205635 36205635 + Missense_Mutation SNP G G A TCGA-AR-A2LM-01A-11D-A17W-09 TCGA-AR-A2LM-10A-01D-A17W-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 901c3c76-1b59-4c02-8478-8790e9b90244 63fa5a8c-460f-4675-9901-097cfc8964b8 19 36205635 36205635 G A SNP ZBTB32 ENST00000262630 human ensembl 69_37n +1 known missense c.107 p.G36E 0.965 pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2 - no_errors ZBTB32 HGNC ENSG00000011590 51 0 0.00 27 17 38.64 - - -