Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All C4orf34 0 genome.wustl.edu 37 4 39558097 39558097 + Missense_Mutation SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 4 39558097 39558097 G A SNP C4orf34 ENST00000295958 human ensembl 69_37n -1 known missense c.218 p.P73L 0.662 pfam_Uncharacterised_CD034/YQF4 pfam_Uncharacterised_CD034/YQF4 - no_errors C4orf34 HGNC ENSG00000163683 33 0 0.00 25 4 13.79 - - - CMBL 0 genome.wustl.edu 37 5 10288580 10288580 + Missense_Mutation SNP T T C TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 5 10288580 10288580 T C SNP CMBL ENST00000296658 human ensembl 69_37n -1 known missense c.277 p.I93V 0.976 pfam_Dienelactn_hydro pfam_Dienelactn_hydro,pfam_PLipase/COase/thioEstase - no_errors CMBL HGNC ENSG00000164237 50 0 0.00 27 5 15.62 - - - ERCC3 0 genome.wustl.edu 37 2 128050283 128050283 + Missense_Mutation SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 2 128050283 128050283 G A SNP ERCC3 ENST00000285398 human ensembl 69_37n -1 known missense c.374 p.A125V 1.000 tigrfam_XPGB_DNA_repair pfam_Helicase/UvrB_dom,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_XPGB_DNA_repair,tigrfam_XPGB_DNA_repair - no_errors ERCC3 HGNC ENSG00000163161 70 0 0.00 31 7 18.42 - - - FASTKD2 0 genome.wustl.edu 37 2 207632179 207632179 + Missense_Mutation SNP G G T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 2 207632179 207632179 G T SNP FASTKD2 ENST00000236980 human ensembl 69_37n +1 known missense c.762 p.L254F 1.000 NULL pfam_FAST_Leu-rich,pfam_FAST_2,pfam_RAP,smart_RAP - no_errors FASTKD2 HGNC ENSG00000118246 36 0 0.00 18 3 14.29 - - - FLJ22184 0 genome.wustl.edu 37 19 7935863 7935863 + Missense_Mutation SNP G G T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 19 7935863 7935863 G T SNP FLJ22184 ENST00000539422 human ensembl 69_37n -1 known missense c.2267 p.P756H 0.136 NULL NULL - no_errors AC010336.1 Clone_based_ensembl_gene ENSG00000183248 22 0 0.00 34 5 12.82 - - - FLJ45832 0 genome.wustl.edu 37 20 29516414 29516414 + RNA SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 20 29516414 29516414 C T SNP FLJ45832 ENST00000380888 human ensembl 69_37n -1 known rna NULL NULL 0.013 - - - no_errors RP4-610C12.4 Clone_based_vega_gene ENSG00000205611 63 0 0.00 42 8 16.00 - - - FUNDC2 0 genome.wustl.edu 37 X 154261714 154261714 + Missense_Mutation SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 X 154261714 154261714 C T SNP FUNDC2 ENST00000369498 human ensembl 69_37n +1 known missense c.170 p.A57V 1.000 NULL pfam_FUN14 - no_errors FUNDC2 HGNC ENSG00000165775 108 0 0.00 73 19 20.43 - - - GAPVD1 0 genome.wustl.edu 37 9 128064260 128064260 + Splice_Site SNP A A T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 9 128064260 128064260 A T SNP GAPVD1 ENST00000394105 human ensembl 69_37n +1 known splice_site c.186-2 e2-2 1.000 - - - no_errors GAPVD1 HGNC ENSG00000165219 37 0 0 30 7 18.92 - - - GDPD4 0 genome.wustl.edu 37 11 76996161 76996161 + Frame_Shift_Del DEL C C - TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 11 76996161 76996161 C - DEL GDPD4 ENST00000376217 human ensembl 69_37n -1 known frame_shift_del c.22 p.E8fs 1.000 NULL pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl - no_errors GDPD4 HGNC ENSG00000178795 23 0 0.00 11 4 25.00 - - - ITGA10 0 genome.wustl.edu 37 1 145533448 145533448 + Missense_Mutation SNP G G T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 1 145533448 145533448 G T SNP ITGA10 ENST00000369304 human ensembl 69_37n +1 known missense c.1331 p.R444L 0.995 smart_Int_alpha_beta-p pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha - no_errors ITGA10 HGNC ENSG00000143127 89 0 0.00 83 19 18.10 - - - LEPRE1 0 genome.wustl.edu 37 1 43213975 43213975 + Missense_Mutation SNP C C A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 1 43213975 43213975 C A SNP LEPRE1 ENST00000236040 human ensembl 69_37n -1 known missense c.1734 p.E578D 0.962 smart_Pro_4_hyd_alph pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph - no_errors LEPRE1 HGNC ENSG00000117385 53 0 0.00 21 8 27.59 - - - MXRA8 0 genome.wustl.edu 37 1 1290681 1290681 + Frame_Shift_Del DEL G G - TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 1 1290681 1290681 G - DEL MXRA8 ENST00000445648 human ensembl 69_37n -1 known frame_shift_del c.421 p.H141fs 1.000 pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like - no_errors MXRA8 HGNC ENSG00000162576 18 0 0.00 3 2 40.00 - - - OR12D2 0 genome.wustl.edu 37 6 29365192 29365192 + Missense_Mutation SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 6 29365192 29365192 C T SNP OR12D2 ENST00000383555 human ensembl 69_37n +1 known missense c.716 p.T239I 0.985 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR12D2 HGNC ENSG00000168787 137 0 0.00 70 11 13.58 - - - PIK3CA 0 genome.wustl.edu 37 3 178936091 178936091 + Missense_Mutation SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 3 178936091 178936091 G A SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.1633 p.E545K 1.000 pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 69 0 0.00 61 16 20.78 - - - PIP5KL1 0 genome.wustl.edu 37 9 130690398 130690398 + Missense_Mutation SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 9 130690398 130690398 C T SNP PIP5KL1 ENST00000388747 human ensembl 69_37n -1 novel missense c.380 p.G127D 0.517 smart_PInositol-4P-5-kinase_core_sub pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub - no_errors PIP5KL1 HGNC ENSG00000167103 31 0 0.00 14 3 17.65 - - - PLK2 0 genome.wustl.edu 37 5 57752411 57752412 + Frame_Shift_Del DEL CT CT - TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 5 57752411 57752412 CT - DEL PLK2 ENST00000274289 human ensembl 69_37n -1 known frame_shift_del c.1162_1161 p.R387fs 0.999:0.999 NULL pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_cat_dom - no_errors PLK2 HGNC ENSG00000145632 92 0 0.00 71 10 12.35 - - - PPP1R9B 0 genome.wustl.edu 37 17 48217647 48217647 + RNA SNP C C A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 17 48217647 48217647 C A SNP PPP1R9B ENST00000513579 human ensembl 69_37n -1 known rna NULL NULL 0.039 - - - no_errors PPP1R9B HGNC ENSG00000108819 35 0 0.00 20 4 16.67 - - - SLC22A9 0 genome.wustl.edu 37 11 63141399 63141399 + Missense_Mutation SNP T T C TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 11 63141399 63141399 T C SNP SLC22A9 ENST00000279178 human ensembl 69_37n +1 known missense c.695 p.M232T 0.174 pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom - no_errors SLC22A9 HGNC ENSG00000149742 80 0 0.00 48 10 17.24 - - - SLITRK1 0 genome.wustl.edu 37 13 84455450 84455450 + Silent SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 13 84455450 84455450 G A SNP SLITRK1 ENST00000377084 human ensembl 69_37n -1 known silent c.193 p.L65 1.000 NULL pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C - no_errors SLITRK1 HGNC ENSG00000178235 23 0 0.00 34 7 17.07 - - - TDRD12 0 genome.wustl.edu 37 19 33293878 33293878 + Silent SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 19 33293878 33293878 G A SNP TDRD12 ENST00000444215 human ensembl 69_37n +1 known silent c.2382 p.L794 1.000 NULL pfam_Tudor,pfam_DNA/RNA_helicase_DEAD/DEAH_N - no_errors TDRD12 HGNC ENSG00000173809 64 0 0.00 36 6 14.29 - - - TRAF3IP2-AS1 0 genome.wustl.edu 37 6 111806014 111806014 + RNA SNP T T C TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 6 111806014 111806014 T C SNP TRAF3IP2-AS1 ENST00000440001 human ensembl 69_37n +1 known rna NULL NULL 0.003 - - - no_errors TRAF3IP2-AS1 HGNC ENSG00000231889 64 0 0.00 26 12 31.58 - - - TRIM73 0 genome.wustl.edu 37 7 75028599 75028599 + Missense_Mutation SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 7 75028599 75028599 G A SNP TRIM73 ENST00000323819 human ensembl 69_37n +1 known missense c.382 p.V128I 1.000 NULL pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING - no_errors TRIM73 HGNC ENSG00000178809 13 0 0.00 18 6 25.00 - - - TTN 0 genome.wustl.edu 37 2 179583473 179583473 + Missense_Mutation SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 2 179583473 179583473 C T SNP TTN ENST00000342992 human ensembl 69_37n -1 known missense c.20722 p.V6908I 0.146 pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like - no_errors TTN HGNC ENSG00000155657 40 0 0.00 29 4 12.12 - - - VDAC3 0 genome.wustl.edu 37 8 42259332 42259332 + Missense_Mutation SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 8 42259332 42259332 C T SNP VDAC3 ENST00000392935 human ensembl 69_37n +1 known missense c.353 p.S118F 1.000 pfam_Porin_Euk pfam_Porin_Euk,prints_Porin_Euk - no_errors VDAC3 HGNC ENSG00000078668 73 0 0.00 57 15 20.83 - - - WDR44 0 genome.wustl.edu 37 X 117566792 117566792 + Missense_Mutation SNP C C T TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 X 117566792 117566792 C T SNP WDR44 ENST00000254029 human ensembl 69_37n +1 known missense c.1786 p.R596W 1.000 superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep - no_errors WDR44 HGNC ENSG00000131725 50 0 0.00 26 4 13.33 - - - WWC1 0 genome.wustl.edu 37 5 167891929 167891929 + Missense_Mutation SNP G G A TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 5 167891929 167891929 G A SNP WWC1 ENST00000265293 human ensembl 69_37n +1 known missense c.3112 p.E1038K 1.000 NULL pfam_WW_Rsp5_WWP,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pfscan_WW_Rsp5_WWP - no_errors WWC1 HGNC ENSG00000113645 96 0 0.00 63 18 22.22 - - - YIPF1 0 genome.wustl.edu 37 1 54331884 54331884 + Frame_Shift_Del DEL C C - TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 1 54331884 54331884 C - DEL YIPF1 ENST00000539954 human ensembl 69_37n -1 known frame_shift_del c.895 p.V299fs 1.000 NULL pfam_Yip1,superfamily_Ribonuclease/ribotoxin - no_errors YIPF1 HGNC ENSG00000058799 49 0 0.00 13 2 13.33 - - - ZC3H3 0 genome.wustl.edu 37 8 144522387 144522389 + In_Frame_Del DEL GAG GAG - TCGA-AR-A5QP-01A-11D-A28B-09 TCGA-AR-A5QP-10A-01D-A28E-09 GAG GAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a0e90c6c-34d0-4c1c-8c71-a914961a6847 60b54869-5add-4799-89a0-e5f090801826 8 144522387 144522389 GAG - DEL ZC3H3 ENST00000262577 human ensembl 69_37n -1 known in_frame_del c.2639_2637 p.S881in_frame_del 0.000:0.000:0.001 NULL pfam_Znf_CCCH,smart_Znf_CCCH - no_errors ZC3H3 HGNC ENSG00000014164 51 0 0.00 30 6 16.67 - - -