Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ABCC6 0 genome.wustl.edu 37 16 16315544 16315544 + Missense_Mutation SNP C C A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 16 16315544 16315544 C A SNP ABCC6 ENST00000205557 human ensembl 69_37n -1 known missense c.181 p.G61C 0.509 tigrfam_Multidrug-R_assoc pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc - no_errors ABCC6 HGNC ENSG00000091262 133 0 0.00 95 32 24.81 - - - ANK1 0 genome.wustl.edu 37 8 41591581 41591581 + Missense_Mutation SNP A A T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 8 41591581 41591581 A T SNP ANK1 ENST00000396942 human ensembl 69_37n -1 known missense c.136 p.L46M 0.979 superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt - no_errors ANK1 HGNC ENSG00000029534 126 0 0.00 103 14 11.97 - - - ATP2A1 0 genome.wustl.edu 37 16 28909329 28909329 + Silent SNP C C A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 16 28909329 28909329 C A SNP ATP2A1 ENST00000357084 human ensembl 69_37n +1 known silent c.1428 p.R476 1.000 superfamily_ATPase_cation_domN,tigrfam_ATPase_P-typ_Ca-transp pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,tigrfam_ATPase_P-typ_Ca-transp,tigrfam_ATPase_P-typ_ion-transptr - no_errors ATP2A1 HGNC ENSG00000196296 55 0 0.00 45 22 32.84 - - - C6orf141 0 genome.wustl.edu 37 6 49519103 49519103 + Missense_Mutation SNP G G C TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 6 49519103 49519103 G C SNP C6orf141 ENST00000371194 human ensembl 69_37n +1 known missense c.598 p.E200Q 0.005 NULL NULL - no_errors C6orf141 HGNC ENSG00000197261 81 0 0.00 35 16 31.37 - - - C8orf4 0 genome.wustl.edu 37 8 40011156 40011156 + Silent SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 8 40011156 40011156 C T SNP C8orf4 ENST00000315792 human ensembl 69_37n +1 known silent c.105 p.A35 0.001 NULL NULL - no_errors C8orf4 HGNC ENSG00000176907 144 0 0.00 135 61 31.12 - - - CNTN4 0 genome.wustl.edu 37 3 3085276 3085276 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 3 3085276 3085276 C T SNP CNTN4 ENST00000397461 human ensembl 69_37n +1 known missense c.2699 p.P900L 1.000 superfamily_Fibronectin_type3 pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like - no_errors CNTN4 HGNC ENSG00000144619 93 0 0.00 113 31 21.38 - - - DNAH10 0 genome.wustl.edu 37 12 124387592 124387592 + Silent SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 12 124387592 124387592 C T SNP DNAH10 ENST00000409039 human ensembl 69_37n +1 known silent c.9393 p.V3131 1.000 NULL pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_PyrdxlP-dep_Trfase_major_dom,smart_AAA+_ATPase - no_errors DNAH10 HGNC ENSG00000197653 85 0 0.00 118 17 12.59 - - - FJX1 0 genome.wustl.edu 37 11 35641314 35641315 + Frame_Shift_Ins INS - - T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 11 35641314 35641315 - T INS FJX1 ENST00000317811 human ensembl 69_37n +1 known frame_shift_ins c.1130_1131 p.E377fs 1.000:1.000 pfam_DUF1193 pfam_DUF1193 - no_errors FJX1 HGNC ENSG00000179431 17 0 0.00 5 5 50.00 - - - GHRL 0 genome.wustl.edu 37 3 10331484 10331484 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 3 10331484 10331484 C T SNP GHRL ENST00000335542 human ensembl 69_37n -1 known missense c.187 p.G63S 0.000 pfam_Motilin_assoc pfam_Motilin_assoc,pfam_Motilin_ghrelin,prints_Preproghrelin - no_errors GHRL HGNC ENSG00000157017 173 0 0.00 65 44 40.37 - - - IGLV2-23 0 genome.wustl.edu 37 22 23040687 23040687 + Silent SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 22 23040687 23040687 C T SNP IGLV2-23 ENST00000390306 human ensembl 69_37n +1 known silent c.135 p.S45 0.013 pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like - no_stop_codon:bad_bp_length_for_coding_region IGLV2-23 HGNC ENSG00000211660 147 0 0.00 96 23 19.33 - - - IL1RL2 0 genome.wustl.edu 37 2 102804317 102804317 + Missense_Mutation SNP C C G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 2 102804317 102804317 C G SNP IL1RL2 ENST00000441515 human ensembl 69_37n +1 known missense c.70 p.P24A 0.057 NULL pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom,prints_IL1_rcpt_1,prints_IL1_rcpt_I/II - no_errors IL1RL2 HGNC ENSG00000115598 174 0 0.00 75 11 12.64 - - - IMPG1 0 genome.wustl.edu 37 6 76751758 76751758 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 6 76751758 76751758 C T SNP IMPG1 ENST00000369950 human ensembl 69_37n -1 known missense c.153 p.M51I 0.001 NULL pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA - no_errors IMPG1 HGNC ENSG00000112706 306 1 0.33 310 42 11.86 - - - LRIT1 0 genome.wustl.edu 37 10 85997061 85997062 + Frame_Shift_Del DEL CA CA - TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 10 85997061 85997062 CA - DEL LRIT1 ENST00000372105 human ensembl 69_37n -1 known frame_shift_del c.504_503 p.M168fs 0.995:0.993 pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like - no_errors LRIT1 HGNC ENSG00000148602 23 0 0.00 18 18 50.00 - - - MEGF8 0 genome.wustl.edu 37 19 42840407 42840407 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 19 42840407 42840407 C T SNP MEGF8 ENST00000251268 human ensembl 69_37n +1 known missense c.1153 p.R385W 0.999 NULL pfam_CUB,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB,superfamily_Plexin-like_fold,smart_CUB,smart_EGF-like,smart_Plexin-like,smart_EGF-like_Ca-bd,smart_EGF_laminin,pfscan_CUB,pfscan_EG-like_dom,pfscan_EGF_laminin - no_errors MEGF8 HGNC ENSG00000105429 38 0 0.00 25 7 21.88 - - - MIR1204 0 genome.wustl.edu 37 8 128808257 128808257 + RNA SNP G G C TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 8 128808257 128808257 G C SNP MIR1204 ENST00000408388 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors MIR1204 HGNC ENSG00000221315 100 0 0.00 118 28 19.05 - - - MLLT4 0 genome.wustl.edu 37 6 168312082 168312082 + Nonsense_Mutation SNP C C G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 6 168312082 168312082 C G SNP MLLT4 ENST00000366806 human ensembl 69_37n +1 known nonsense c.1950 p.Y650* 1.000 NULL pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc - no_errors MLLT4 HGNC ENSG00000130396 160 0 0.00 115 41 26.28 - - - MOSPD2 0 genome.wustl.edu 37 X 14910870 14910870 + Silent SNP T T A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e X 14910870 14910870 T A SNP MOSPD2 ENST00000380492 human ensembl 69_37n +1 known silent c.105 p.R35 1.000 superfamily_CRAL/TRIO_N_dom pfam_CRAL-TRIO_dom,pfam_Major_sperm,superfamily_CRAL-TRIO_dom,superfamily_PapD-like,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_Major_sperm - no_errors MOSPD2 HGNC ENSG00000130150 213 0 0.00 204 56 21.46 - - - MYO9B 0 genome.wustl.edu 37 19 17313112 17313112 + Missense_Mutation SNP G G T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 19 17313112 17313112 G T SNP MYO9B ENST00000397274 human ensembl 69_37n +1 known missense c.4836 p.K1612N 1.000 NULL pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom - no_errors MYO9B HGNC ENSG00000099331 36 0 0.00 31 5 13.89 - - - NTRK1 0 genome.wustl.edu 37 1 156843599 156843599 + Missense_Mutation SNP G G A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 1 156843599 156843599 G A SNP NTRK1 ENST00000524377 human ensembl 69_37n +1 known missense c.1025 p.R342Q 0.019 NULL pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Cys-rich_flank_reg_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_neurotrophic_rcpt_1,prints_Tyr_kinase_NGF_rcpt - no_errors NTRK1 HGNC ENSG00000198400 48 0 0.00 32 12 27.27 - - - NUP214 0 genome.wustl.edu 37 9 134003062 134003062 + Missense_Mutation SNP A A G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 9 134003062 134003062 A G SNP NUP214 ENST00000451030 human ensembl 69_37n +1 known missense c.197 p.N66S 1.000 NULL smart_WD40_repeat - no_errors NUP214 HGNC ENSG00000126883 73 0 0.00 58 17 22.67 - - - PDE11A 0 genome.wustl.edu 37 2 178565928 178565928 + Missense_Mutation SNP G G A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 2 178565928 178565928 G A SNP PDE11A ENST00000286063 human ensembl 69_37n -1 known missense c.2165 p.A722V 1.000 pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase - no_errors PDE11A HGNC ENSG00000128655 133 0 0.00 79 16 16.84 - - - PHKA2 0 genome.wustl.edu 37 X 18943843 18943843 + Silent SNP G G T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e X 18943843 18943843 G T SNP PHKA2 ENST00000379942 human ensembl 69_37n -1 known silent c.1512 p.V504 0.914 pfam_Glyco_hydro_15 pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like - no_errors PHKA2 HGNC ENSG00000044446 194 0 0.00 161 38 19.10 - - - PIK3CA 0 genome.wustl.edu 37 3 178952085 178952085 + Missense_Mutation SNP A A G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 3 178952085 178952085 A G SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.3140 p.H1047R 1.000 superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 95 0 0.00 95 33 25.78 - - - PRDM8 0 genome.wustl.edu 37 4 81124648 81124648 + Missense_Mutation SNP C C G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 4 81124648 81124648 C G SNP PRDM8 ENST00000339711 human ensembl 69_37n +1 known missense c.2032 p.R678G 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors PRDM8 HGNC ENSG00000152784 63 0 0.00 19 10 34.48 - - - PRSS57 0 genome.wustl.edu 37 19 687116 687117 + Frame_Shift_Ins INS - - G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 19 687116 687117 - G INS PRSS57 ENST00000329267 human ensembl 69_37n -1 known frame_shift_ins c.454_453 p.T151fs 0.000:0.000 pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6 pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6 - no_errors PRSS57 HGNC ENSG00000185198 30 0 0.00 23 4 14.81 - - - RAVER1 0 genome.wustl.edu 37 19 10434107 10434107 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 19 10434107 10434107 C T SNP RAVER1 ENST00000293677 human ensembl 69_37n -1 known missense c.943 p.A315T 1.000 NULL pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom - no_errors RAVER1 HGNC ENSG00000161847 24 0 0.00 8 5 35.71 - - - SORCS1 0 genome.wustl.edu 37 10 108412155 108412155 + Missense_Mutation SNP C C G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 10 108412155 108412155 C G SNP SORCS1 ENST00000344440 human ensembl 69_37n -1 known missense c.2460 p.M820I 1.000 pfam_PKD_dom,superfamily_PKD_dom pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom - no_errors SORCS1 HGNC ENSG00000108018 133 0 0.00 121 26 17.69 - - - SPEN 0 genome.wustl.edu 37 1 16254679 16254679 + Silent SNP G G A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 1 16254679 16254679 G A SNP SPEN ENST00000375759 human ensembl 69_37n +1 known silent c.1944 p.R648 0.952 NULL pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom - no_errors SPEN HGNC ENSG00000065526 84 0 0.00 82 18 18.00 - - - TBC1D3P1-DHX40P1 0 genome.wustl.edu 37 17 58092166 58092166 + RNA SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 17 58092166 58092166 C T SNP TBC1D3P1-DHX40P1 ENST00000407042 human ensembl 69_37n -1 known rna NULL NULL 1.000 - - - no_errors TBC1D3P1-DHX40P1 HGNC ENSG00000267104 43 0 0.00 19 6 24.00 - - - TCF3 0 genome.wustl.edu 37 19 1612215 1612216 + Frame_Shift_Ins INS - - TA TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 19 1612215 1612216 - TA INS TCF3 ENST00000344749 human ensembl 69_37n -1 known frame_shift_ins c.1804_1803 p.Q601fs 1.000:1.000 superfamily_HLH_DNA-bd,smart_HLH_DNA-bd pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd - no_errors TCF3 HGNC ENSG00000071564 14 0 0.00 9 5 35.71 - - - TOPORS 0 genome.wustl.edu 37 9 32541997 32541997 + Silent SNP G G T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 9 32541997 32541997 G T SNP TOPORS ENST00000360538 human ensembl 69_37n -1 known silent c.2526 p.T842 1.000 NULL pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING - no_errors TOPORS HGNC ENSG00000197579 132 0 0.00 105 23 17.97 - - - UPF3B 0 genome.wustl.edu 37 X 118968924 118968924 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e X 118968924 118968924 C T SNP UPF3B ENST00000276201 human ensembl 69_37n -1 known missense c.1369 p.D457N 0.996 NULL pfam_Nonsense_mediated_decay_UPF3 - no_errors UPF3B HGNC ENSG00000125351 174 0 0.00 155 66 29.86 - - - USP39 0 genome.wustl.edu 37 2 85857864 85857864 + Silent SNP T T G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 2 85857864 85857864 T G SNP USP39 ENST00000409470 human ensembl 69_37n +1 known silent c.744 p.P248 1.000 pfam_Peptidase_C19,pfscan_Peptidase_C19 pfam_Peptidase_C19,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19 - no_errors USP39 HGNC ENSG00000168883 81 0 0.00 72 12 14.29 - - - WDR96 0 genome.wustl.edu 37 10 105922136 105922136 + Missense_Mutation SNP G G A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 10 105922136 105922136 G A SNP WDR96 ENST00000357060 human ensembl 69_37n -1 known missense c.3272 p.P1091L 0.004 NULL superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu - no_errors WDR96 HGNC ENSG00000197748 184 0 0.00 134 28 17.28 - - - XK 0 genome.wustl.edu 37 X 37553705 37553705 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e X 37553705 37553705 C T SNP XK ENST00000378616 human ensembl 69_37n +1 known missense c.412 p.R138W 0.998 pfam_Transport_prot_XK pfam_Transport_prot_XK - no_errors XK HGNC ENSG00000047597 151 0 0.00 199 26 11.56 - - - ZFHX4 0 genome.wustl.edu 37 8 77768353 77768353 + Missense_Mutation SNP C C T TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 8 77768353 77768353 C T SNP ZFHX4 ENST00000521891 human ensembl 69_37n +1 known missense c.9196 p.R3066C 1.000 NULL pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2 - no_errors ZFHX4 HGNC ENSG00000091656 63 0 0.00 54 17 23.94 - - - ZNF765 0 genome.wustl.edu 37 19 53911368 53911368 + Missense_Mutation SNP A A G TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 19 53911368 53911368 A G SNP ZNF765 ENST00000396408 human ensembl 69_37n +1 known missense c.560 p.H187R 0.002 NULL pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF765 HGNC ENSG00000196417 76 0 0.00 106 21 16.41 - - - ZSCAN21 0 genome.wustl.edu 37 7 99654841 99654841 + Missense_Mutation SNP G G A TCGA-BH-A0EB-01A-11W-A050-09 TCGA-BH-A0EB-10A-01W-A055-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 3861ca01-bcc3-42a9-835d-1ef9f1a053bd 991496de-9acd-43e0-b853-2c19c155254e 7 99654841 99654841 G A SNP ZSCAN21 ENST00000292450 human ensembl 69_37n +1 known missense c.212 p.C71Y 1.000 pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN - no_errors ZSCAN21 HGNC ENSG00000166529 43 0 0.00 22 10 31.25 - - -