Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All C6orf118 0 genome.wustl.edu 37 6 165715615 165715615 + Missense_Mutation SNP G G T TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 6 165715615 165715615 G T SNP C6orf118 ENST00000230301 human ensembl 69_37n -1 known missense c.196 p.P66T 0.953 NULL superfamily_Ribonuclease/ribotoxin - no_errors C6orf118 HGNC ENSG00000112539 144 0 0.00 109 15 12.10 - - - CASP8 0 genome.wustl.edu 37 2 202149683 202149683 + Missense_Mutation SNP C C T TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 2 202149683 202149683 C T SNP CASP8 ENST00000358485 human ensembl 69_37n +1 known missense c.1124 p.S375F 0.897 pfam_Pept_C14_cat,smart_Pept_C14_p45_core,pfscan_Pept_C14_ICE_p20 pfam_DED,pfam_Pept_C14_cat,superfamily_DEATH-like,smart_DED,smart_Pept_C14_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core - no_errors CASP8 HGNC ENSG00000064012 159 0 0.00 112 16 12.40 - - - CHD4 0 genome.wustl.edu 37 12 6690307 6690307 + Silent SNP A A G TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 12 6690307 6690307 A G SNP CHD4 ENST00000309577 human ensembl 69_37n -1 known silent c.4896 p.D1632 0.677 NULL pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow - no_errors CHD4 HGNC ENSG00000111642 340 0 0.00 356 55 13.38 - - - DHCR24 0 genome.wustl.edu 37 1 55331007 55331007 + Missense_Mutation SNP C C T TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 1 55331007 55331007 C T SNP DHCR24 ENST00000371269 human ensembl 69_37n -1 known missense c.989 p.R330H 1.000 NULL pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2 - no_errors DHCR24 HGNC ENSG00000116133 214 0 0.00 190 22 10.33 - - - DPY19L2P1 0 genome.wustl.edu 37 7 35131356 35131357 + RNA DEL TG TG - TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 TG TG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 7 35131356 35131357 TG - DEL DPY19L2P1 ENST00000436258 human ensembl 69_37n -1 known rna NULL NULL 0.000:0.000 - - - no_errors DPY19L2P1 HGNC ENSG00000189212 26 0 0.00 26 5 16.13 - - - LINGO1 0 genome.wustl.edu 37 15 77907402 77907402 + Missense_Mutation SNP C C T TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 15 77907402 77907402 C T SNP LINGO1 ENST00000355300 human ensembl 69_37n -1 known missense c.847 p.V283I 0.996 NULL pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like - no_errors LINGO1 HGNC ENSG00000169783 163 1 0.61 129 37 22.16 - - - MUC12 0 genome.wustl.edu 37 7 100643078 100643078 + Silent SNP A A C TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 7 100643078 100643078 A C SNP MUC12 ENST00000379442 human ensembl 69_37n +1 known silent c.9663 p.T3221 0.001 NULL pfam_SEA - no_errors MUC12 HGNC ENSG00000205277 21 0 0.00 44 9 16.98 - - - PDE4A 0 genome.wustl.edu 37 19 10570300 10570300 + Missense_Mutation SNP C C G TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 19 10570300 10570300 C G SNP PDE4A ENST00000352831 human ensembl 69_37n +1 known missense c.1230 p.I410M 1.000 NULL pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase - no_errors PDE4A HGNC ENSG00000065989 30 0 0.00 21 4 16.00 - - - PHF21B 0 genome.wustl.edu 37 22 45279150 45279150 + Missense_Mutation SNP C C T TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 22 45279150 45279150 C T SNP PHF21B ENST00000313237 human ensembl 69_37n -1 known missense c.1412 p.R471H 1.000 NULL pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger - no_errors PHF21B HGNC ENSG00000056487 37 0 0.00 32 5 13.51 - - - TP53 0 genome.wustl.edu 37 17 7574003 7574003 + Nonsense_Mutation SNP G G A TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 17 7574003 7574003 G A SNP TP53 ENST00000269305 human ensembl 69_37n -1 known nonsense c.1024 p.R342* 0.307 pfam_p53_tetrameristn,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor - no_errors TP53 HGNC ENSG00000141510 50 0 0.00 43 6 12.24 - - - ZNF618 0 genome.wustl.edu 37 9 116811102 116811102 + Missense_Mutation SNP G G T TCGA-E2-A1B6-01A-31D-A12Q-09 TCGA-E2-A1B6-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1aaf88fc-f7cb-4239-a420-224352194160 409d90e2-1252-4a42-95d6-9625033b2c8f 9 116811102 116811102 G T SNP ZNF618 ENST00000374126 human ensembl 69_37n +1 known missense c.1520 p.G507V 1.000 NULL superfamily_RNaseH-like_dom,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF618 HGNC ENSG00000157657 56 0 0.00 48 7 12.73 - - -