Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ABAT 0 genome.wustl.edu 37 16 8875208 8875208 + Missense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 16 8875208 8875208 G A SNP ABAT ENST00000268251 human ensembl 69_37n +1 known missense c.1424 p.R475H 1.000 superfamily_PyrdxlP-dep_Trfase_major_dom,tigrfam_4NH2But_aminotransferase_euk pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase_major_dom,tigrfam_4NH2But_aminotransferase_euk - no_errors ABAT HGNC ENSG00000183044 73 0 0.00 12 39 75.00 - - - ABCA12 0 genome.wustl.edu 37 2 215851351 215851351 + Missense_Mutation SNP C C A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 215851351 215851351 C A SNP ABCA12 ENST00000272895 human ensembl 69_37n -1 known missense c.4078 p.A1360S 1.000 pfscan_ABC_transporter-like pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like - no_errors ABCA12 HGNC ENSG00000144452 65 0 0.00 6 29 82.86 - - - ADSS 0 genome.wustl.edu 37 1 244615099 244615099 + Nonsense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 244615099 244615099 G T SNP ADSS ENST00000366535 human ensembl 69_37n -1 known nonsense c.21 p.Y7* 0.003 NULL pfam_Adenylosuccinate_synthetase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase - no_errors ADSS HGNC ENSG00000035687 27 0 0.00 18 17 48.57 - - - AFAP1 0 genome.wustl.edu 37 4 7774593 7774593 + Missense_Mutation SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 4 7774593 7774593 G C SNP AFAP1 ENST00000420658 human ensembl 69_37n -1 known missense c.2207 p.T736S 1.000 NULL pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology - no_errors AFAP1 HGNC ENSG00000196526 31 0 0.00 8 9 50.00 - - - ANAPC4 0 genome.wustl.edu 37 4 25390489 25390489 + Missense_Mutation SNP T T C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 4 25390489 25390489 T C SNP ANAPC4 ENST00000510092 human ensembl 69_37n +1 known missense c.500 p.L167P 1.000 superfamily_WD40_repeat_dom,pirsf_APC4_metazoa superfamily_WD40_repeat_dom,pirsf_APC4_metazoa - no_errors ANAPC4 HGNC ENSG00000053900 54 0 0.00 23 10 30.30 - - - ANGPTL7 0 genome.wustl.edu 37 1 11254927 11254927 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 11254927 11254927 C G SNP ANGPTL7 ENST00000376819 human ensembl 69_37n +1 known missense c.888 p.N296K 1.000 pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C - no_errors ANGPTL7 HGNC ENSG00000171819 58 0 0.00 2 23 92.00 - - - ARHGAP24 0 genome.wustl.edu 37 4 86893257 86893257 + Frame_Shift_Del DEL T T - TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 4 86893257 86893257 T - DEL ARHGAP24 ENST00000395184 human ensembl 69_37n +1 known frame_shift_del c.668 p.P224fs 0.998 pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom - no_errors ARHGAP24 HGNC ENSG00000138639 74 0 0.00 6 23 76.67 - - - ARSH 0 genome.wustl.edu 37 X 2936644 2936644 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 X 2936644 2936644 G T SNP ARSH ENST00000381130 human ensembl 69_37n +1 known missense c.834 p.K278N 0.021 pfam_Sulfatase,superfamily_Alkaline_phosphatase_core pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core - no_errors ARSH HGNC ENSG00000205667 112 0 0.00 137 41 22.91 - - - BPIFB4 0 genome.wustl.edu 37 20 31678569 31678569 + Silent SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 20 31678569 31678569 G A SNP BPIFB4 ENST00000375483 human ensembl 69_37n +1 known silent c.1107 p.P369 0.927 superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C - no_errors BPIFB4 HGNC ENSG00000186191 87 0 0.00 33 34 50.75 - - - CHST15 0 genome.wustl.edu 37 10 125801928 125801928 + Missense_Mutation SNP A A G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 10 125801928 125801928 A G SNP CHST15 ENST00000346248 human ensembl 69_37n -1 known missense c.922 p.Y308H 1.000 pfam_Sulfotransferase_dom pfam_Sulfotransferase_dom - no_errors CHST15 HGNC ENSG00000182022 55 0 0.00 40 37 47.44 - - - CLDN2 0 genome.wustl.edu 37 X 106171891 106171891 + Missense_Mutation SNP C C T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 X 106171891 106171891 C T SNP CLDN2 ENST00000336803 human ensembl 69_37n +1 known missense c.433 p.R145W 0.960 pfam_PMP22/EMP/MP20/Claudin pfam_PMP22/EMP/MP20/Claudin,prints_Claudin2,prints_Claudin,prints_Claudin14 - no_errors CLDN2 HGNC ENSG00000165376 141 0 0.00 63 42 40.00 - - - COL11A1 0 genome.wustl.edu 37 1 103480081 103480081 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 103480081 103480081 G T SNP COL11A1 ENST00000358392 human ensembl 69_37n -1 known missense c.1594 p.L532I 1.000 NULL pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Laminin_G,smart_Fib_collagen_C - no_errors COL11A1 HGNC ENSG00000060718 88 0 0.00 30 37 55.22 - - - CSTF2 0 genome.wustl.edu 37 X 100087875 100087875 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 X 100087875 100087875 G T SNP CSTF2 ENST00000415585 human ensembl 69_37n +1 known missense c.1244 p.R415M 1.000 NULL pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom - no_errors CSTF2 HGNC ENSG00000101811 37 0 0.00 17 25 59.52 - - - CUL9 0 genome.wustl.edu 37 6 43170930 43170930 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 6 43170930 43170930 G T SNP CUL9 ENST00000252050 human ensembl 69_37n +1 known missense c.3837 p.K1279N 1.000 pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology - no_errors CUL9 HGNC ENSG00000112659 93 0 0.00 55 44 44.44 - - - DBX1 0 genome.wustl.edu 37 11 20178187 20178187 + Missense_Mutation SNP C C T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 11 20178187 20178187 C T SNP DBX1 ENST00000227256 human ensembl 69_37n -1 known missense c.722 p.R241H 0.000 superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain - no_errors DBX1 HGNC ENSG00000109851 12 0 0.00 8 6 42.86 - - - DCTN6 0 genome.wustl.edu 37 8 30038046 30038046 + Missense_Mutation SNP T T C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 8 30038046 30038046 T C SNP DCTN6 ENST00000221114 human ensembl 69_37n +1 known missense c.374 p.I125T 1.000 superfamily_Trimer_LpxA-like superfamily_Trimer_LpxA-like - no_errors DCTN6 HGNC ENSG00000104671 101 0 0.00 71 50 41.32 - - - E2F2 0 genome.wustl.edu 37 1 23857034 23857034 + Silent SNP C C A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 23857034 23857034 C A SNP E2F2 ENST00000361729 human ensembl 69_37n -1 known silent c.252 p.P84 1.000 NULL pfam_E2F_TDP - no_errors E2F2 HGNC ENSG00000007968 27 0 0.00 18 15 45.45 - - - EGR2 0 genome.wustl.edu 37 10 64573499 64573499 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 10 64573499 64573499 G T SNP EGR2 ENST00000242480 human ensembl 69_37n -1 known missense c.899 p.A300E 0.990 NULL pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors EGR2 HGNC ENSG00000122877 22 0 0.00 1 10 90.91 - - - FBXO45 0 genome.wustl.edu 37 3 196296086 196296086 + Silent SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 3 196296086 196296086 G A SNP FBXO45 ENST00000311630 human ensembl 69_37n +1 known silent c.231 p.E77 1.000 superfamily_ConA-like_lec_gl,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like pfam_SPRY_rcpt,pfam_F-box_dom_cyclin-like,superfamily_ConA-like_lec_gl,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_F-box_dom_cyclin-like - no_errors FBXO45 HGNC ENSG00000174013 16 0 0.00 20 15 42.86 - - - FKBP4 0 genome.wustl.edu 37 12 2909686 2909686 + Silent SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 12 2909686 2909686 G A SNP FKBP4 ENST00000001008 human ensembl 69_37n +1 known silent c.975 p.L325 1.000 pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom pfam_PPIase_FKBP_dom,pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_PPIase_FKBP_dom - no_errors FKBP4 HGNC ENSG00000004478 29 0 0.00 25 13 33.33 - - - FLJ43860 0 genome.wustl.edu 37 8 142486200 142486200 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 8 142486200 142486200 G T SNP FLJ43860 ENST00000430863 human ensembl 69_37n -1 known missense c.1493 p.S498Y 0.001 NULL NULL - pseudogene AC100803.1 Clone_based_vega_gene ENSG00000226807 40 0 0.00 38 7 15.56 - - - FOLH1 0 genome.wustl.edu 37 11 49194915 49194915 + Missense_Mutation SNP T T C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 11 49194915 49194915 T C SNP FOLH1 ENST00000256999 human ensembl 69_37n -1 known missense c.1219 p.K407E 0.180 pfam_Peptidase_M28 pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom - no_errors FOLH1 HGNC ENSG00000086205 175 0 0.00 109 70 38.89 - - - GREB1L 0 genome.wustl.edu 37 18 19088164 19088164 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 18 19088164 19088164 C G SNP GREB1L ENST00000424526 human ensembl 69_37n +1 known missense c.4454 p.S1485C 1.000 NULL NULL - no_errors GREB1L HGNC ENSG00000141449 45 0 0.00 78 18 18.75 - - - GUCY2D 0 genome.wustl.edu 37 17 7911260 7911260 + Silent SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 17 7911260 7911260 G T SNP GUCY2D ENST00000254854 human ensembl 69_37n +1 known silent c.1578 p.G526 0.981 smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Haem_no_assoc-bd,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors GUCY2D HGNC ENSG00000132518 24 0 0.00 26 12 31.58 - - - HMGB4 0 genome.wustl.edu 37 1 34330058 34330058 + Missense_Mutation SNP A A T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 34330058 34330058 A T SNP HMGB4 ENST00000519684 human ensembl 69_37n +1 known missense c.266 p.D89V 1.000 superfamily_HMG_superfamily pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily - no_errors HMGB4 HGNC ENSG00000176256 71 0 0.00 38 25 39.68 - - - IFITM10 0 genome.wustl.edu 37 11 1756661 1756661 + Splice_Site SNP T T G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 11 1756661 1756661 T G SNP IFITM10 ENST00000340134 human ensembl 69_37n -1 known splice_site c.538-2 e3-2 1.000 - - - no_errors IFITM10 HGNC ENSG00000244242 69 0 0.00 26 19 42.22 - - - IGFN1 0 genome.wustl.edu 37 1 201172878 201172878 + Missense_Mutation SNP A A T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 201172878 201172878 A T SNP IGFN1 ENST00000335211 human ensembl 69_37n +1 known missense c.760 p.I254F 0.823 smart_Ig_sub pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like - no_errors IGFN1 HGNC ENSG00000163395 40 0 0.00 5 38 88.37 - - - IGSF10 0 genome.wustl.edu 37 3 151160785 151160785 + Missense_Mutation SNP C C T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 3 151160785 151160785 C T SNP IGSF10 ENST00000282466 human ensembl 69_37n -1 known missense c.5950 p.D1984N 0.995 pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like - no_errors IGSF10 HGNC ENSG00000152580 71 0 0.00 63 39 38.24 - - - IHH 0 genome.wustl.edu 37 2 219925127 219925127 + Silent SNP C C A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 219925127 219925127 C A SNP IHH ENST00000295731 human ensembl 69_37n -1 known silent c.63 p.V21 0.998 pirsf_Hedgehog pirsf_Hedgehog,pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,pfscan_Intein_splice_site,prints_Hedgehog - no_errors IHH HGNC ENSG00000163501 18 0 0.00 6 13 68.42 - - - KAZN 0 genome.wustl.edu 37 1 14925608 14925608 + Nonsense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 14925608 14925608 G T SNP KAZN ENST00000376030 human ensembl 69_37n +1 known nonsense c.115 p.E39* 1.000 NULL pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM - no_errors KAZN HGNC ENSG00000189337 12 0 0.00 6 7 53.85 - - - KIF21A 0 genome.wustl.edu 37 12 39711981 39711981 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 12 39711981 39711981 C G SNP KIF21A ENST00000395670 human ensembl 69_37n -1 known missense c.3802 p.A1268P 1.000 NULL pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors KIF21A HGNC ENSG00000139116 99 1 1.00 18 38 67.86 - - - KLHL7 0 genome.wustl.edu 37 7 23164391 23164391 + Missense_Mutation SNP A A G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 7 23164391 23164391 A G SNP KLHL7 ENST00000339077 human ensembl 69_37n +1 known missense c.308 p.Y103C 1.000 pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like - no_errors KLHL7 HGNC ENSG00000122550 73 0 0.00 46 43 48.31 - - - LINC00283 0 genome.wustl.edu 37 13 103397321 103397321 + RNA SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 13 103397321 103397321 C G SNP LINC00283 ENST00000430111 human ensembl 69_37n +1 known rna NULL NULL 0.000 - - - no_errors LINC00283 HGNC ENSG00000231633 138 0 0.00 158 53 25.12 - - - MACF1 0 genome.wustl.edu 37 1 39854171 39854171 + Missense_Mutation SNP T T C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 39854171 39854171 T C SNP MACF1 ENST00000372925 human ensembl 69_37n +1 novel missense c.6808 p.S2270P 0.043 smart_Spectrin/alpha-actinin pfam_Spectrin_repeat,pfam_GAS2_dom,superfamily_GAS2_dom,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_EF_HAND_2 - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region MACF1 HGNC ENSG00000127603 43 0 0.00 25 21 45.65 - - - MARS 0 genome.wustl.edu 37 12 57910296 57910296 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 12 57910296 57910296 C G SNP MARS ENST00000262027 human ensembl 69_37n +1 known missense c.2635 p.L879V 1.000 pfam_WHEP-TRS,superfamily_S15_NS1_RNA-bd,pfscan_WHEP-TRS pfam_Methionyl/Leucyl_tRNA_Synth,pfam_WHEP-TRS,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_S15_NS1_RNA-bd,superfamily_Thioredoxin-like_fold,pfscan_WHEP-TRS,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth - no_errors MARS HGNC ENSG00000166986 43 0 0.00 29 19 39.58 - - - MRPS2 0 genome.wustl.edu 37 9 138395775 138395775 + Silent SNP C C T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 9 138395775 138395775 C T SNP MRPS2 ENST00000241600 human ensembl 69_37n +1 known silent c.687 p.P229 0.517 pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2 - no_errors MRPS2 HGNC ENSG00000122140 46 0 0.00 2 22 91.67 - - - MUC6 0 genome.wustl.edu 37 11 1023613 1023613 + Missense_Mutation SNP C C A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 11 1023613 1023613 C A SNP MUC6 ENST00000421673 human ensembl 69_37n -1 known missense c.3422 p.G1141V 0.000 NULL pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C - no_errors MUC6 HGNC ENSG00000184956 116 0 0.00 66 48 42.11 - - - MX1 0 genome.wustl.edu 37 21 42824760 42824760 + Missense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 21 42824760 42824760 G A SNP MX1 ENST00000398598 human ensembl 69_37n +1 known missense c.1722 p.M574I 0.000 pfam_GED,smart_GED pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,smart_Dynamin_GTPase,smart_GED,prints_Dynamin - no_errors MX1 HGNC ENSG00000157601 73 0 0.00 10 18 64.29 - - - MYO15A 0 genome.wustl.edu 37 17 18060272 18060272 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 17 18060272 18060272 C G SNP MYO15A ENST00000205890 human ensembl 69_37n +1 known missense c.8606 p.S2869C 1.000 superfamily_SH3_domain pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom - no_errors MYO15A HGNC ENSG00000091536 50 0 0.00 30 24 44.44 - - - MYO16 0 genome.wustl.edu 37 13 109777494 109777494 + Silent SNP T T C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 13 109777494 109777494 T C SNP MYO16 ENST00000356711 human ensembl 69_37n +1 known silent c.3504 p.L1168 0.996 pfscan_IQ_motif_EF-hand-BS pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom - no_errors MYO16 HGNC ENSG00000041515 65 0 0.00 50 39 43.33 - - - NAF1 0 genome.wustl.edu 37 4 164061489 164061489 + Missense_Mutation SNP C C T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 4 164061489 164061489 C T SNP NAF1 ENST00000274054 human ensembl 69_37n -1 known missense c.764 p.R255Q 1.000 pfam_H/ACA_rnp_Gar1/Naf1,superfamily_Transl_elong_init/rib_B-barrel pfam_H/ACA_rnp_Gar1/Naf1,superfamily_Transl_elong_init/rib_B-barrel - no_errors NAF1 HGNC ENSG00000145414 58 0 0.00 4 26 86.67 - - - NAV3 0 genome.wustl.edu 37 12 78513280 78513280 + Missense_Mutation SNP A A G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 12 78513280 78513280 A G SNP NAV3 ENST00000397909 human ensembl 69_37n +1 known missense c.3304 p.I1102V 1.000 NULL pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain - no_errors NAV3 HGNC ENSG00000067798 43 0 0.00 21 13 38.24 - - - NRAP 0 genome.wustl.edu 37 10 115355443 115355443 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 10 115355443 115355443 G T SNP NRAP ENST00000369358 human ensembl 69_37n -1 known missense c.4499 p.T1500N 0.967 smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin - no_errors NRAP HGNC ENSG00000197893 82 0 0.00 45 30 40.00 - - - NWD1 0 genome.wustl.edu 37 19 16918863 16918863 + Missense_Mutation SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 19 16918863 16918863 G C SNP NWD1 ENST00000379808 human ensembl 69_37n +1 known missense c.4203 p.Q1401H 0.982 pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors NWD1 HGNC ENSG00000188039 63 0 0.00 30 39 56.52 - - - OR5I1 0 genome.wustl.edu 37 11 55703337 55703338 + Frame_Shift_Ins INS - - A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 11 55703337 55703338 - A INS OR5I1 ENST00000301532 human ensembl 69_37n -1 known frame_shift_ins c.540_539 p.C181fs 1.000:1.000 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR5I1 HGNC ENSG00000167825 44 0 0.00 28 17 37.78 - - - PDE3A 0 genome.wustl.edu 37 12 20522466 20522466 + Missense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 12 20522466 20522466 G A SNP PDE3A ENST00000359062 human ensembl 69_37n +1 known missense c.248 p.G83E 1.000 NULL pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom - no_errors PDE3A HGNC ENSG00000172572 27 0 0.00 20 11 34.38 - - - PDPR 0 genome.wustl.edu 37 16 70177496 70177496 + Silent SNP T T C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 16 70177496 70177496 T C SNP PDPR ENST00000288050 human ensembl 69_37n +1 known silent c.1689 p.T563 0.001 pfam_GCV_T_N pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom - no_errors PDPR HGNC ENSG00000090857 130 0 0.00 72 23 24.21 - - - PLA2R1 0 genome.wustl.edu 37 2 160832693 160832693 + Silent SNP A A G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 160832693 160832693 A G SNP PLA2R1 ENST00000283243 human ensembl 69_37n -1 known silent c.2481 p.H827 0.061 superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin - no_errors PLA2R1 HGNC ENSG00000153246 97 0 0.00 5 48 90.57 - - - PROM2 0 genome.wustl.edu 37 2 95951442 95951442 + Missense_Mutation SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 95951442 95951442 G C SNP PROM2 ENST00000317620 human ensembl 69_37n +1 known missense c.1931 p.G644A 0.005 pfam_Prominin pfam_Prominin - no_errors PROM2 HGNC ENSG00000155066 39 0 0.00 19 14 42.42 - - - RBM42 0 genome.wustl.edu 37 19 36125255 36125255 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 19 36125255 36125255 G T SNP RBM42 ENST00000262633 human ensembl 69_37n +1 known missense c.1115 p.S372I 1.000 NULL pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom - no_errors RBM42 HGNC ENSG00000126254 35 0 0.00 18 14 43.75 - - - RBM4B 0 genome.wustl.edu 37 11 66436729 66436729 + Missense_Mutation SNP C C T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 11 66436729 66436729 C T SNP RBM4B ENST00000310046 human ensembl 69_37n -1 known missense c.446 p.R149Q 1.000 NULL pfam_RRM_dom,pfam_Znf_CCHC,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom - no_errors RBM4B HGNC ENSG00000173914 40 0 0.00 16 18 52.94 - - - SLC2A11 0 genome.wustl.edu 37 22 24204354 24204354 + Missense_Mutation SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 22 24204354 24204354 G C SNP SLC2A11 ENST00000398356 human ensembl 69_37n +1 known missense c.106 p.G36R 1.000 pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt - no_errors SLC2A11 HGNC ENSG00000133460 119 0 0.00 16 71 81.61 - - - SLC5A10 0 genome.wustl.edu 37 17 18874526 18874526 + Missense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 17 18874526 18874526 G A SNP SLC5A10 ENST00000395647 human ensembl 69_37n +1 known missense c.841 p.D281N 1.000 pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr - no_errors SLC5A10 HGNC ENSG00000154025 42 0 0.00 34 25 42.37 - - - ST3GAL3 0 genome.wustl.edu 37 1 44202021 44202021 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 1 44202021 44202021 C G SNP ST3GAL3 ENST00000262915 human ensembl 69_37n +1 known missense c.88 p.L30V 1.000 pirsf_Sialyl_trans pfam_Glyco_trans_29,pirsf_Sialyl_trans - no_errors ST3GAL3 HGNC ENSG00000126091 163 0 0.00 92 69 42.86 - - - SUDS3 0 genome.wustl.edu 37 12 118823947 118823947 + Missense_Mutation SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 12 118823947 118823947 G C SNP SUDS3 ENST00000397564 human ensembl 69_37n +1 known missense c.297 p.M99I 1.000 pfam_Sds3 pfam_Sds3 - no_errors SUDS3 HGNC ENSG00000111707 59 0 0.00 63 28 30.77 - - - TBC1D2B 0 genome.wustl.edu 37 15 78305580 78305580 + Missense_Mutation SNP C C A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 15 78305580 78305580 C A SNP TBC1D2B ENST00000300584 human ensembl 69_37n -1 known missense c.1855 p.D619Y 1.000 NULL pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Prefoldin,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom - no_errors TBC1D2B HGNC ENSG00000167202 43 0 0.00 7 11 61.11 - - - TRDN 0 genome.wustl.edu 37 6 123892141 123892141 + Silent SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 6 123892141 123892141 G T SNP TRDN ENST00000398178 human ensembl 69_37n -1 known silent c.159 p.V53 0.991 pfam_Asp-B-hydro/Triadin_dom pfam_Asp-B-hydro/Triadin_dom - no_errors TRDN HGNC ENSG00000186439 86 0 0.00 41 29 41.43 - - - TRO 0 genome.wustl.edu 37 X 54956593 54956593 + Missense_Mutation SNP A A T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 X 54956593 54956593 A T SNP TRO ENST00000173898 human ensembl 69_37n +1 known missense c.3436 p.S1146C 0.006 NULL pfam_MAGE,pfscan_MAGE - no_errors TRO HGNC ENSG00000067445 71 0 0.00 42 28 40.00 - - - TRPM6 0 genome.wustl.edu 37 9 77435343 77435343 + Silent SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 9 77435343 77435343 C G SNP TRPM6 ENST00000451710 human ensembl 69_37n -1 known silent c.1011 p.G337 0.835 NULL pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase - no_errors TRPM6 HGNC ENSG00000119121 55 0 0.00 44 24 35.29 - - - TSHZ3 0 genome.wustl.edu 37 19 31768092 31768092 + Silent SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 19 31768092 31768092 G A SNP TSHZ3 ENST00000240587 human ensembl 69_37n -1 known silent c.2607 p.S869 0.747 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2 - no_errors TSHZ3 HGNC ENSG00000121297 58 0 0.00 40 26 39.39 - - - TTN 0 genome.wustl.edu 37 2 179514910 179514911 + In_Frame_Ins INS - - GAG TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 179514910 179514911 - GAG INS TTN ENST00000342992 human ensembl 69_37n -1 known in_frame_ins c.32496_32495 p.10833in_frame_insS 0.003:0.016 superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like - no_errors TTN HGNC ENSG00000155657 32 0 0.00 9 26 74.29 - - - TTN 0 genome.wustl.edu 37 2 179641594 179641594 + Missense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 179641594 179641594 G A SNP TTN ENST00000342992 human ensembl 69_37n -1 known missense c.4997 p.T1666I 0.996 superfamily_RNaseH-like_dom pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like - no_errors TTN HGNC ENSG00000155657 65 0 0.00 10 37 78.72 - - - TXNDC15 0 genome.wustl.edu 37 5 134223692 134223692 + Missense_Mutation SNP A A C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 5 134223692 134223692 A C SNP TXNDC15 ENST00000508779 human ensembl 69_37n +1 putative missense c.362 p.E121A 0.000 NULL pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region TXNDC15 HGNC ENSG00000113621 54 0 0.00 6 24 80.00 - - - TXNDC15 0 genome.wustl.edu 37 5 134223693 134223693 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 5 134223693 134223693 G T SNP TXNDC15 ENST00000358387 human ensembl 69_37n +1 known missense c.412 p.A138S 0.000 NULL pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold - no_errors TXNDC15 HGNC ENSG00000113621 54 0 0.00 6 25 80.65 - - - UNC5B 0 genome.wustl.edu 37 10 73048351 73048351 + Missense_Mutation SNP A A C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 10 73048351 73048351 A C SNP UNC5B ENST00000335350 human ensembl 69_37n +1 known missense c.928 p.K310Q 1.000 pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt pfam_ZU5,pfam_Ig_I-set,pfam_Death,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like - no_errors UNC5B HGNC ENSG00000107731 26 0 0.00 6 16 72.73 - - - VPS13C 0 genome.wustl.edu 37 15 62243152 62243152 + Missense_Mutation SNP G G T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 15 62243152 62243152 G T SNP VPS13C ENST00000261517 human ensembl 69_37n -1 known missense c.4528 p.L1510M 0.002 NULL pfam_VPSAP,pfam_Autophagy-rel_C - no_errors VPS13C HGNC ENSG00000129003 49 0 0.00 8 31 79.49 - - - ZC3HAV1 0 genome.wustl.edu 37 7 138764516 138764516 + Missense_Mutation SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 7 138764516 138764516 G C SNP ZC3HAV1 ENST00000242351 human ensembl 69_37n -1 known missense c.1171 p.L391V 0.000 NULL pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom - no_errors ZC3HAV1 HGNC ENSG00000105939 80 0 0.00 8 80 90.91 - - - ZDBF2 0 genome.wustl.edu 37 2 207171420 207171420 + Missense_Mutation SNP A A T TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 207171420 207171420 A T SNP ZDBF2 ENST00000374423 human ensembl 69_37n +1 known missense c.2168 p.Q723L 0.001 NULL pfam_Znf_DBF,smart_Znf_DBF - no_errors ZDBF2 HGNC ENSG00000204186 65 0 0.00 7 33 80.49 - - - ZNF512B 0 genome.wustl.edu 37 20 62594493 62594493 + Silent SNP G G C TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 20 62594493 62594493 G C SNP ZNF512B ENST00000217130 human ensembl 69_37n -1 known silent c.1923 p.S641 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF512B HGNC ENSG00000196700 25 0 0.00 9 6 40.00 - - - ZNF513 0 genome.wustl.edu 37 2 27601550 27601550 + Nonsense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 2 27601550 27601550 G A SNP ZNF513 ENST00000323703 human ensembl 69_37n -1 known nonsense c.583 p.R195* 0.998 smart_Znf_C2H2-like,pfscan_Znf_C2H2 smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZNF513 HGNC ENSG00000163795 102 0 0.00 28 67 70.53 - - - ZNF99 0 genome.wustl.edu 37 19 22940729 22940729 + Missense_Mutation SNP G G A TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 19 22940729 22940729 G A SNP ZNF99 ENST00000397104 human ensembl 69_37n -1 known missense c.1709 p.S570F 0.000 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF99 HGNC ENSG00000213973 23 0 0.00 21 9 30.00 - - - ZSCAN21 0 genome.wustl.edu 37 7 99655431 99655431 + Missense_Mutation SNP C C G TCGA-HN-A2NL-01A-11D-A18P-09 TCGA-HN-A2NL-10A-01D-A18P-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 73d09eab-d3f5-442d-aea8-690b282fd68a e21e6d93-3bb6-4ba1-8c65-e20c13cfdf16 7 99655431 99655431 C G SNP ZSCAN21 ENST00000292450 human ensembl 69_37n +1 known missense c.510 p.H170Q 0.000 NULL pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN - no_errors ZSCAN21 HGNC ENSG00000166529 69 0 0.00 33 24 40.68 - - -