writing sdrf to COAD.merger.sdrf.txt ------------------------------------------------------------------ 2016-02-12 17:44:37.562006 . ['/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/COAD/22227673/infile1.input.tsv', '/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/COAD/22227673/infile3.input.tsv', '/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/COAD/22227673/infile4.input.tsv'] Make a softlink...... Flag: False. Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/COAD/22227673/infile1.input.tsv Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/COAD/22227673/infile3.input.tsv Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/COAD/22227673/infile4.input.tsv Make a softlink is done.