Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID PTS 5805 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 112101359 112101359 + Missense_Mutation SNP C C G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CHFR 55743 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 12 133435693 133435693 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 HSPG2 3339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 22207292 22207292 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SACS 26278 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 13 23915268 23915268 + Missense_Mutation SNP T T G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SERPINB3 6317 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 18 61323171 61323171 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 RYR1 6261 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 38976258 38976258 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SEMA6B 10501 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 4557004 4557004 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MYO1F 4542 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 8615207 8615207 + Missense_Mutation SNP T T A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 LTN1 26046 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 21 30331996 30331996 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CSF2RB 1439 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 22 37334203 37334203 + Missense_Mutation SNP G G T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 DRD3 1814 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 3 113890761 113890761 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CLCN2 1181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 184075816 184075816 + Missense_Mutation SNP C C G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 EBF1 1879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 5 158526463 158526463 + Silent SNP G G T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 KIAA0947 23379 broad.mit.edu;hgsc.bcm.edu 37 5 5463283 5463284 + Frame_Shift_Ins INS - - TA novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 GPBP1 65056 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 56545266 56545266 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 GPBP1 65056 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 5 56545374 56545374 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MAP1B 4131 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 71493836 71493836 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 RASA1 5921 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 5 86675579 86675579 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TAS2R1 50834 hgsc.bcm.edu;ucsc.edu 37 5 9629359 9629359 + Silent SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CACNA2D1 781 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 81641523 81641523 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TOX 9760 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 8 60031454 60031454 + Nonsense_Mutation SNP A A T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 GEM 2669 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 8 95264412 95264412 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 KRT76 51350 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 12 53169235 53169235 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 BCAR1 9564 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 16 75270827 75270827 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ASXL2 55252 broad.mit.edu;hgsc.bcm.edu 37 2 25966455 25966455 + Silent SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MYL7 58498 broad.mit.edu;hgsc.bcm.edu 37 7 44179423 44179423 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ODF2L 57489 broad.mit.edu 37 1 86826142 86826142 + Frame_Shift_Del DEL T T - novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TUBB8 347688 broad.mit.edu 37 10 93637 93637 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SYT7 9066 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 61291299 61291299 + Missense_Mutation SNP C C A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ITGA5 3678 broad.mit.edu 37 12 54812840 54812840 + Missense_Mutation SNP G G T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TBC1D15 64786 broad.mit.edu 37 12 72314554 72314554 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 DDX55 57696 broad.mit.edu;mdanderson.org 37 12 124092052 124092052 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 HOMEZ 57594 broad.mit.edu 37 14 23745955 23745955 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 DTWD1 56986 broad.mit.edu 37 15 49935536 49935536 + Frame_Shift_Del DEL C C - novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SIN3A 25942 broad.mit.edu 37 15 75682085 75682085 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 RFX1 5989 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 14076447 14076447 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CYP4F2 8529 broad.mit.edu 37 19 16000303 16000303 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 EHD2 30846 broad.mit.edu;bcgsc.ca 37 19 48220038 48220038 + Missense_Mutation SNP G G A rs34140460 byfrequency TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TTLL1 25809 broad.mit.edu 37 22 43459837 43459837 + Silent SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 NBEAL2 23218 broad.mit.edu;ucsc.edu;mdanderson.org 37 3 47041771 47041771 + Silent SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 BSN 8927 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 49691694 49691694 + Missense_Mutation SNP A A T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TIGIT 201633 broad.mit.edu;ucsc.edu;mdanderson.org 37 3 114018494 114018494 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 KLF15 28999 broad.mit.edu 37 3 126071789 126071789 + Splice_Site SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TNK2 10188 broad.mit.edu 37 3 195594314 195594314 + Frame_Shift_Del DEL G G - novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 PPP1R11 6992 broad.mit.edu 37 6 30035207 30035207 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 EYA1 2138 broad.mit.edu;mdanderson.org;bcgsc.ca 37 8 72211306 72211306 + Missense_Mutation SNP G G T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 TLE1 7088 broad.mit.edu 37 9 84199172 84199172 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 OR1L1 26737 broad.mit.edu 37 9 125424320 125424320 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ABL1 25 broad.mit.edu;mdanderson.org;bcgsc.ca 37 9 133748274 133748274 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 LCN10 414332 broad.mit.edu 37 9 139636409 139636409 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 AMPD3 272 ucsc.edu 37 11 10506508 10506508 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CCT7 10574 ucsc.edu 37 2 73467611 73467611 + Silent SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CDH23 64072 ucsc.edu 37 10 73572329 73572329 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 CLEC4G 339390 ucsc.edu 37 19 7796207 7796207 + Splice_Site SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MCM3AP 8888 ucsc.edu 37 21 47697480 47697480 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 PRR5-ARHGAP8 553158 ucsc.edu 37 22 45243892 45243892 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 RASSF10 644943 ucsc.edu 37 11 13032159 13032159 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 RSPH6A 81492 ucsc.edu 37 19 46318402 46318402 + Silent SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SNX25 83891 ucsc.edu;mdanderson.org;bcgsc.ca 37 4 186283807 186283807 + Missense_Mutation SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SP8 221833 ucsc.edu 37 7 20824901 20824901 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ZBTB48 3104 ucsc.edu 37 1 6646821 6646821 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ZNF676 163223 ucsc.edu;mdanderson.org 37 19 22363307 22363307 + Silent SNP T T C rs112075209 TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 FRG1B 284802 mdanderson.org 37 20 29628282 29628282 + RNA SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 LILRA3 11026 mdanderson.org 37 19 54802554 54802554 + Missense_Mutation SNP G G C rs114004709 byfrequency TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MAGEC1 9947 mdanderson.org 37 X 140994087 140994087 + Silent SNP C C A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MIR663B 100313824 mdanderson.org 37 2 133014592 133014592 + RNA SNP G G A novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MUC4 4585 mdanderson.org 37 3 195515460 195515460 + Silent SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 NUP50 10762 mdanderson.org 37 22 45574342 45574342 + Silent SNP A A G rs13209197 TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 OR2T2 401992 mdanderson.org 37 1 248616749 248616749 + Silent SNP C C G rs1770044 byfrequency TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 PRSS3 5646 mdanderson.org 37 9 33797881 33797881 + Silent SNP G G A rs144235891 byfrequency TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 SMCHD1 23347 mdanderson.org 37 18 2707619 2707619 + Missense_Mutation SNP G G A rs2276092 byfrequency TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 UGT2B4 7363 mdanderson.org 37 4 70361420 70361420 + Missense_Mutation SNP T T C novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 ANKRD30BL 554226 bcgsc.ca 37 2 132905792 132905792 + RNA SNP G G C rs189049364 TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 FRG1B 284802 bcgsc.ca 37 20 29623231 29623231 + RNA SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 MX2 4600 bcgsc.ca 37 21 42770882 42770882 + Missense_Mutation SNP A A G novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 FAM193B 54540 bcgsc.ca 37 5 176966072 176966072 + Missense_Mutation SNP C C T novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 KIAA0947 23379 bcgsc.ca 37 5 5463284 5463285 + Frame_Shift_Ins INS - - TA novel TCGA-KM-8443-01A-11D-2310-10 TCGA-KM-8443-10A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708 c00de7a0-0b09-4e07-988c-ef2a7f8e932a 982dbbf8-fdf8-4653-91ed-2e857e1a7708