Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID CEP164 22897 hgsc.bcm.edu;mdanderson.org 37 11 117214946 117214946 + Silent SNP G G T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 OR10Z1 128368 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 158576392 158576392 + Missense_Mutation SNP T T A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ACBD3 64746 broad.mit.edu;hgsc.bcm.edu 37 1 226349254 226349255 + In_Frame_Ins INS - - TTC novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MPHOSPH8 54737 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 13 20220943 20220943 + Missense_Mutation SNP G G C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 CPT2 1376 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 53676357 53676357 + Missense_Mutation SNP C C G novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SIGLEC14 100049587 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 19 52149193 52149193 + Missense_Mutation SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 NLRP7 199713 hgsc.bcm.edu;mdanderson.org 37 19 55450827 55450827 + Missense_Mutation SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MARCO 8685 hgsc.bcm.edu 37 2 119750740 119750740 + Frame_Shift_Del DEL C C - novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SMARCC2 6601 hgsc.bcm.edu 37 12 56565715 56565715 + Missense_Mutation SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 KBTBD5 131377 hgsc.bcm.edu 37 3 42730128 42730128 + Missense_Mutation SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 C3orf38 285237 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 3 88205252 88205252 + Missense_Mutation SNP C C A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 COL28A1 340267 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 7477054 7477054 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 RPRD2 23248 broad.mit.edu 37 1 150432553 150432553 + Missense_Mutation SNP A A G novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PEAR1 375033 broad.mit.edu 37 1 156877478 156877478 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FOLH1B 219595 broad.mit.edu;mdanderson.org 37 11 89421805 89421805 + Missense_Mutation SNP G G C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PGR 5241 broad.mit.edu 37 11 100999089 100999089 + Frame_Shift_Del DEL T T - novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MLL2 8085 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 49432249 49432249 + Missense_Mutation SNP C C A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 RGMA 56963 broad.mit.edu 37 15 93588500 93588500 + Missense_Mutation SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SPAG5 10615 broad.mit.edu 37 17 26919762 26919762 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MAST1 22983 broad.mit.edu;mdanderson.org;bcgsc.ca 37 19 12985463 12985463 + Missense_Mutation SNP C C A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MYO9B 4650 broad.mit.edu 37 19 17321179 17321179 + Missense_Mutation SNP A A G novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ZNF528 84436 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 52909852 52909852 + Missense_Mutation SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MFSD6 54842 broad.mit.edu 37 2 191364759 191364759 + Missense_Mutation SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 BHLHE40 8553 broad.mit.edu;mdanderson.org;bcgsc.ca 37 3 5025274 5025274 + Missense_Mutation SNP A A C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FAM86JP 100125556 broad.mit.edu 37 3 125647387 125647387 + RNA SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SDAD1 55153 broad.mit.edu 37 4 76896979 76896979 + Missense_Mutation SNP A A G novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 NDST4 64579 broad.mit.edu;mdanderson.org;bcgsc.ca 37 4 115767025 115767025 + Missense_Mutation SNP A A T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ABCE1 6059 broad.mit.edu 37 4 146041093 146041093 + Frame_Shift_Del DEL T T - novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 CDC23 8697 broad.mit.edu 37 5 137524673 137524673 + Silent SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 LAMB4 22798 broad.mit.edu 37 7 107763584 107763584 + Frame_Shift_Del DEL A A - novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 DOCK5 80005 broad.mit.edu 37 8 25203089 25203089 + Silent SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ORM1 5004 broad.mit.edu 37 9 117088629 117088629 + Missense_Mutation SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FAM9A 171482 broad.mit.edu 37 X 8767124 8767124 + Missense_Mutation SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SRP14 6727 broad.mit.edu 37 15 40328594 40328595 + In_Frame_Ins INS - - GGG novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SRRM2 23524 broad.mit.edu 37 16 2818052 2818053 + Frame_Shift_Ins INS - - C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 CDH13 1012 broad.mit.edu 37 16 83636109 83636110 + Frame_Shift_Ins INS - - G novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FAM122B 159090 broad.mit.edu 37 X 133930385 133930386 + Splice_Site INS - - C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 CLASP2 23122 ucsc.edu;mdanderson.org 37 3 33586217 33586217 + Silent SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 EFEMP2 30008 ucsc.edu 37 11 65635766 65635766 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FAM184A 79632 ucsc.edu 37 6 119332586 119332586 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PPFIA1 8500 ucsc.edu 37 11 70178163 70178163 + Missense_Mutation SNP A A G novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 TBC1D12 23232 ucsc.edu 37 10 96163181 96163181 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 TFAM 7019 ucsc.edu 37 10 60148464 60148464 + Missense_Mutation SNP T T G rs77418790 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ADAM29 11086 mdanderson.org 37 4 175899075 175899076 + Silent DNP CA CA TG rs61744599 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 CA CA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ADCYAP1 116 mdanderson.org 37 18 907710 907710 + Missense_Mutation SNP A A G rs2856966 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 AGPAT9 84803 mdanderson.org 37 4 84502873 84502873 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 CLEC18B 497190 mdanderson.org 37 16 74444923 74444923 + Missense_Mutation SNP C C T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 EML3 256364 mdanderson.org 37 11 62378660 62378660 + Silent SNP G G A rs12808829 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FAM86A 196483 mdanderson.org 37 16 5141852 5141852 + Silent SNP C C T rs117562636 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FAM86A 196483 mdanderson.org 37 16 5141855 5141855 + Silent SNP T T C rs116976665 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FLG 2312 mdanderson.org 37 1 152276282 152276282 + Missense_Mutation SNP C C G rs76133835 bycluster TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FRG1B 284802 mdanderson.org 37 20 29624054 29624054 + RNA SNP T T A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FRG1B 284802 mdanderson.org 37 20 29628243 29628243 + RNA SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FRG1B 284802 mdanderson.org 37 20 29628245 29628245 + RNA SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 FRG1B 284802 mdanderson.org 37 20 29628282 29628282 + RNA SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 GART 2618 mdanderson.org 37 21 34903861 34903861 + Missense_Mutation SNP C C A rs142038738 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 GOLGA6A 342096 mdanderson.org 37 15 74363307 74363307 + Missense_Mutation SNP C C T rs2740420 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MEFV 4210 mdanderson.org 37 16 3304654 3304654 + Silent SNP T T C rs224224 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MUC4 4585 mdanderson.org 37 3 195509331 195509331 + Silent SNP C C A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MUC4 4585 mdanderson.org 37 3 195512445 195512445 + Silent SNP C C A rs200972857 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MUC6 4588 mdanderson.org 37 11 1017530 1017530 + Silent SNP G G A novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MUC6 4588 mdanderson.org 37 11 1018394 1018394 + Silent SNP C C T rs111444881 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PRAMEF1 65121 mdanderson.org 37 1 12854401 12854401 + Nonsense_Mutation SNP G G T rs78584260 alternate_allele TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PRAMEF4 400735 mdanderson.org 37 1 12939548 12939548 + Silent SNP G G C rs77695621 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PRDM9 56979 mdanderson.org 37 5 23527323 23527323 + Missense_Mutation SNP C C G rs200539936 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 PSG9 5678 mdanderson.org 37 19 43763023 43763023 + Missense_Mutation SNP A A G rs1135905 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 RBMXL1 494115 mdanderson.org 37 1 89448841 89448841 + Silent SNP T T C rs150045246 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 RBMXL1 494115 mdanderson.org 37 1 89448868 89448868 + Nonsense_Mutation SNP A A T rs200907077 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SLC19A1 6573 mdanderson.org 37 21 46951556 46951556 + Silent SNP A A G rs12659 bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SLC35G5 83650 mdanderson.org 37 8 11189601 11189601 + Missense_Mutation SNP G G T novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 SULT1A2 6799 mdanderson.org 37 16 28603721 28603721 + Missense_Mutation SNP C C T rs45583638 bycluster;byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 TAS2R31 259290 mdanderson.org 37 12 11183066 11183066 + Missense_Mutation SNP A A T rs138895028 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 TAS2R31 259290 mdanderson.org 37 12 11183496 11183496 + Missense_Mutation SNP T T C rs199736450 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 TPRX1 284355 mdanderson.org 37 19 48305555 48305555 + Missense_Mutation SNP G G A rs147380237 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 TYSND1 219743 mdanderson.org 37 10 71905695 71905695 + Silent SNP A A G rs10999158 TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 WDR59 79726 mdanderson.org 37 16 74942828 74942828 + Missense_Mutation SNP A A G rs201965155 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 WDR59 79726 mdanderson.org 37 16 74942844 74942844 + Silent SNP T T C rs147993698 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 WDR59 79726 mdanderson.org 37 16 74942865 74942865 + Silent SNP T T C rs141093453 byfrequency TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 MARCO 8685 bcgsc.ca 37 2 119750741 119750741 + Frame_Shift_Del DEL C C - novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 CNGB3 54714 bcgsc.ca 37 8 87660049 87660049 + Missense_Mutation SNP T T C novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 ACBD3 64746 bcgsc.ca 37 1 226349255 226349256 + In_Frame_Ins INS - - TTC novel TCGA-KN-8422-01A-11D-2310-10 TCGA-KN-8422-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1 d648c804-4eaf-4252-8b6f-13378158a07d e13915df-0ba2-4242-b4f7-27733b6a01c1