Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID OSBPL5 114879 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 11 3114269 3114269 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a WDR66 144406 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 12 122406016 122406016 + Silent SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a OPRD1 4985 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 29189494 29189494 + Missense_Mutation SNP G G A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a OR11H12 440153 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 14 19377804 19377804 + Missense_Mutation SNP C C A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a DICER1 23405 hgsc.bcm.edu;ucsc.edu 37 14 95579561 95579561 + Silent SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a TTC19 54902 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 15930770 15930770 + Silent SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a SYT4 6860 hgsc.bcm.edu;ucsc.edu 37 18 40850387 40850387 + Silent SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a NOSIP 51070 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 50059875 50059875 + Missense_Mutation SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a FAM55C 91775 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 3 101540561 101540561 + Missense_Mutation SNP C C G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a C4orf32 132720 hgsc.bcm.edu 37 4 113066760 113066760 + Silent SNP G G A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a KIAA1109 84162 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 123160846 123160846 + Missense_Mutation SNP G G A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a SESN1 27244 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 109315685 109315685 + Missense_Mutation SNP C C A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a RC3H2 54542 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 9 125616244 125616244 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ARID5B 84159 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 10 63851395 63851395 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a CHD1L 9557 hgsc.bcm.edu 37 1 146767123 146767123 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a DMAP1 55929 hgsc.bcm.edu 37 1 44684410 44684410 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a GBP2 2634 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 89585913 89585913 + Missense_Mutation SNP A A C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a TFAP2C 7022 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 20 55208518 55208518 + Silent SNP G G A rs146916115 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a AR 367 hgsc.bcm.edu 37 X 66765207 66765208 + Missense_Mutation DNP GC GC AG novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 GC GC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a HRNR 388697 broad.mit.edu 37 1 152191466 152191466 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a PPP1R12B 4660 broad.mit.edu;mdanderson.org;bcgsc.ca 37 1 202391786 202391786 + Missense_Mutation SNP A A G rs141572166 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a FAM35DP 439965 broad.mit.edu 37 10 47380033 47380033 + RNA SNP G G A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a TALDO1 6888 broad.mit.edu 37 11 763428 763428 + Silent SNP T T G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a DCDC5 100506627 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 30942461 30942461 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a LRRC4C 57689 broad.mit.edu;mdanderson.org 37 11 40136544 40136544 + Silent SNP C C G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a PITPNM2 57605 broad.mit.edu 37 12 123481375 123481375 + Missense_Mutation SNP T T G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a BORA 79866 broad.mit.edu 37 13 73320117 73320117 + Frame_Shift_Del DEL A A - novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a COL4A1 1282 broad.mit.edu;bcgsc.ca 37 13 110833715 110833715 + Missense_Mutation SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a MGA 23269 broad.mit.edu;ucsc.edu;mdanderson.org 37 15 42034895 42034895 + Silent SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a FBN1 2200 broad.mit.edu 37 15 48812976 48812976 + Missense_Mutation SNP C C T rs146726731 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a PDPR 55066 broad.mit.edu;mdanderson.org 37 16 70161181 70161181 + Silent SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a GGNBP2 79893 broad.mit.edu 37 17 34942391 34942391 + Silent SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ZNF98 148198 broad.mit.edu;mdanderson.org 37 19 22575373 22575373 + Missense_Mutation SNP C C T rs684900 bycluster TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a FBXO17 115290 broad.mit.edu 37 19 39440795 39440795 + Frame_Shift_Del DEL C C - novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a NCKAP1 10787 broad.mit.edu 37 2 183791547 183791547 + Silent SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a PAX3 5077 broad.mit.edu 37 2 223066834 223066834 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ACTR8 93973 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 53914090 53914090 + Missense_Mutation SNP G G T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a EHMT2 10919 broad.mit.edu;mdanderson.org;bcgsc.ca 37 6 31848534 31848534 + Missense_Mutation SNP C C A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a SENP6 26054 broad.mit.edu 37 6 76386858 76386858 + Frame_Shift_Del DEL T T - novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a PCLO 27445 broad.mit.edu 37 7 82579183 82579183 + Missense_Mutation SNP T T C rs201013392 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a RB1CC1 9821 broad.mit.edu 37 8 53586752 53586752 + Missense_Mutation SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a SYBU 55638 broad.mit.edu;mdanderson.org;bcgsc.ca 37 8 110587964 110587964 + Missense_Mutation SNP A A T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a RAPGEF1 2889 broad.mit.edu;bcgsc.ca 37 9 134504010 134504010 + Missense_Mutation SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a RASA1 5921 broad.mit.edu 37 5 86564705 86564706 + Frame_Shift_Ins INS - - G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a BPTF 2186 ucsc.edu 37 17 65955758 65955758 + Silent SNP T T C rs202116659 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a HAVCR1 26762 ucsc.edu 37 5 156479572 156479572 + Missense_Mutation SNP A A G rs2862716 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a IST1 9798 ucsc.edu;mdanderson.org 37 16 71956529 71956529 + Silent SNP C C T rs28701631 bycluster;byfrequency;by1000genomes TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a JAK2 3717 ucsc.edu 37 9 5073722 5073722 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ODF1 4956 ucsc.edu;mdanderson.org 37 8 103573033 103573033 + Missense_Mutation SNP A A G rs62523272 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a PRAMEF4 400735 ucsc.edu;mdanderson.org 37 1 12939904 12939904 + Missense_Mutation SNP A A C rs77146569 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a TMPRSS13 84000 ucsc.edu;mdanderson.org 37 11 117789317 117789317 + Silent SNP T T C rs201369736 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a TTBK1 84630 ucsc.edu;bcgsc.ca 37 6 43230987 43230987 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a WDR59 79726 ucsc.edu 37 16 74942865 74942865 + Silent SNP T T C rs141093453 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ANKRD20A5P 440482 mdanderson.org 37 18 14184079 14184079 + RNA SNP A A C rs77210572 bycluster;byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a BDNF-AS 497258 mdanderson.org 37 11 27681199 27681199 + RNA SNP C C T rs4030469 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a DDX12P 440081 mdanderson.org 37 12 9574020 9574020 + RNA SNP T T C rs200847155 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a EIF4G1 1981 mdanderson.org 37 3 184039769 184039770 + Silent DNP GA GA AG novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 GA GA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a EIF4G1 1981 mdanderson.org 37 3 184039775 184039775 + Missense_Mutation SNP C C A rs200221361 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a FAM118A 55007 mdanderson.org 37 22 45723898 45723898 + Missense_Mutation SNP G G A rs62001863 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a FAM157B 100132403 mdanderson.org 37 9 141107548 141107548 + Missense_Mutation SNP A A G rs199863448 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a LRRK2 120892 mdanderson.org 37 12 40728900 40728900 + Silent SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a MUC2 4583 mdanderson.org 37 11 1093158 1093158 + Silent SNP T T C rs202045556 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a MUC4 4585 mdanderson.org 37 3 195506089 195506089 + Missense_Mutation SNP G G A novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a NUMBL 9253 mdanderson.org 37 19 41173904 41173904 + Silent SNP T T C rs79658769 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a OBSCN 84033 mdanderson.org 37 1 228504669 228504669 + Silent SNP G G A rs61825302 bycluster;byfrequency;by1000genomes TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ODF1 4956 mdanderson.org 37 8 103573015 103573015 + Missense_Mutation SNP A A G rs62523271 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ODF1 4956 mdanderson.org 37 8 103573037 103573037 + Silent SNP G G C rs62523273 byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a OR4A16 81327 mdanderson.org 37 11 55111509 55111509 + Missense_Mutation SNP T T C rs75872349 by1000genomes TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a RAPH1 65059 mdanderson.org 37 2 204305990 204305990 + Silent SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ZNF98 148198 mdanderson.org 37 19 22575313 22575313 + Missense_Mutation SNP C C G rs71236900 bycluster;byfrequency TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a TTC22 55001 bcgsc.ca 37 1 55266518 55266518 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a CASP4 837 bcgsc.ca 37 11 104817887 104817887 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ZNF814 730051 bcgsc.ca 37 19 58385748 58385748 + Missense_Mutation SNP G G A rs145250945 TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ZNF814 730051 bcgsc.ca 37 19 58385788 58385788 + Missense_Mutation SNP A A G novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ATRIP 84126 bcgsc.ca 37 3 48498818 48498818 + Splice_Site SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a CCDC28A 25901 bcgsc.ca 37 6 139101036 139101036 + Missense_Mutation SNP T T C novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ANKIB1 54467 bcgsc.ca 37 7 91948698 91948698 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a SPATA31D1 389763 bcgsc.ca 37 9 84607861 84607861 + Missense_Mutation SNP C C T novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a ND5 0 bcgsc.ca 37 MT 13129 13129 + Frame_Shift_Del DEL C C - novel TCGA-KL-8344-01A-11D-2310-10 TCGA-KL-8344-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a 3ace181a-23bd-424e-a87e-e0c01a2a2cb8 d0764fec-581b-4bd3-afe8-adcdf685562a