Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCG4 64137 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 119029566 119029566 + Missense_Mutation SNP G G T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ADAM29 11086 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 175898804 175898804 + Missense_Mutation SNP G G T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ADAMTS19 171019 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 129015555 129015555 + Nonsense_Mutation SNP C C T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ADAT3 113179 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 1913029 1913029 + Missense_Mutation SNP C C G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ADAT3 113179 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 1913030 1913030 + Silent SNP G G T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ANO5 203859 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 22242734 22242734 + Missense_Mutation SNP A A G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ARHGEF17 9828 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 73066597 73066597 + Missense_Mutation SNP T T C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ARSH 347527 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 2951181 2951181 + Missense_Mutation SNP C C A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 BACE1 23621 hgsc.bcm.edu;ucsc.edu 37 11 117165880 117165894 + In_Frame_Del DEL GCCTTCCCAGTTGGA GCCTTCCCAGTTGGA - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 GCCTTCCCAGTTGGA GCCTTCCCAGTTGGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 BRCA2 675 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 32899270 32899270 + Missense_Mutation SNP A A G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A A G A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CA14 23632 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 150235516 150235516 + Missense_Mutation SNP A A G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CAMK2B 816 hgsc.bcm.edu 37 7 44266158 44266159 + Frame_Shift_Ins INS - - G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CELSR3 1951 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 48697119 48697119 + Missense_Mutation SNP G G C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CEP57 9702 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 95564238 95564238 + Nonsense_Mutation SNP A A T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CEP57 9702 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 95564248 95564248 + Missense_Mutation SNP T T C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 COL6A6 131873 hgsc.bcm.edu;ucsc.edu 37 3 130287096 130287096 + Silent SNP C C T rs61730501 byfrequency;by1000genomes TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CPSF1 29894 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 145634429 145634429 + Silent SNP G G C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 CWC15 51503 hgsc.bcm.edu 37 11 94699507 94699508 + Frame_Shift_Ins INS - - T rs34805065 bycluster;by1000genomes TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 DBN1 1627 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 176893974 176893974 + Silent SNP C C A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 DDX24 57062 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 94517732 94517732 + Silent SNP C C A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 DPP6 1804 hgsc.bcm.edu;ucsc.edu 37 7 154561188 154561188 + Silent SNP C C T rs56091483 bycluster;byfrequency;by1000genomes TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 F12 2161 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 176831333 176831333 + Missense_Mutation SNP C C A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 FAM83G 644815 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 18907263 18907263 + Missense_Mutation SNP T T C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 FAT3 120114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 92590423 92590423 + Silent SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 HTR7 3363 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 92508881 92508881 + Missense_Mutation SNP G G T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 HYAL2 8692 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 50357640 50357640 + Missense_Mutation SNP C C G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 IRS1 3667 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 227661146 227661146 + Missense_Mutation SNP G G T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 JPH3 57338 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 87677876 87677876 + Missense_Mutation SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 KDM5C 8242 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 53231127 53231127 + Missense_Mutation SNP T T A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 LHFPL1 340596 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 111874741 111874741 + Frame_Shift_Del DEL A A - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 LOXL2 4017 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 23217701 23217701 + Missense_Mutation SNP C C T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 LRRC16A 55604 broad.mit.edu;ucsc.edu 37 6 25509937 25509937 + Silent SNP C T T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MADD 8567 broad.mit.edu;hgsc.bcm.edu 37 11 47336865 47336865 + Missense_Mutation SNP T T C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MBD6 114785 broad.mit.edu;hgsc.bcm.edu 37 12 57919671 57919671 + Missense_Mutation SNP C C T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MBD6 114785 hgsc.bcm.edu 37 12 57919667 57919667 + Missense_Mutation SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MBD6 114785 hgsc.bcm.edu;ucsc.edu 37 12 57919663 57919663 + Frame_Shift_Del DEL G G - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MDN1 23195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 90513110 90513110 + Missense_Mutation SNP T T G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MPDZ 8777 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 13221425 13221427 + In_Frame_Del DEL TCC TCC - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 TCC TCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MRAS 22808 broad.mit.edu;ucsc.edu 37 3 138117372 138117372 + Missense_Mutation SNP A T T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 NAV3 89795 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 78400326 78400326 + Silent SNP C C G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 NRXN2 9379 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 64434814 64434814 + Missense_Mutation SNP A A C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 OR2AE1 81392 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 99474477 99474477 + Silent SNP A A G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 OVCH1 341350 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 29629166 29629166 + Missense_Mutation SNP C C T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 PIGM 93183 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 160001252 160001252 + Missense_Mutation SNP A A T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 QRICH1 54870 hgsc.bcm.edu 37 3 49094428 49094437 + Frame_Shift_Del DEL ACAGCCTGCA ACAGCCTGCA - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 ACAGCCTGCA ACAGCCTGCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 RAI1 10743 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 17696713 17696713 + Missense_Mutation SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 SLC23A2 9962 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 4880292 4880292 + Missense_Mutation SNP C C T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 SSFA2 6744 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 182774683 182774683 + Missense_Mutation SNP A A G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 SURF4 6836 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 136233529 136233529 + Silent SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 TBX6 6911 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 30099894 30099894 + Missense_Mutation SNP A A T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 TDP2 51567 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 24658870 24658870 + Missense_Mutation SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 TNKS 8658 broad.mit.edu;hgsc.bcm.edu 37 8 9413533 9413533 + Silent SNP G G T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 TRIM41 90933 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 180651530 180651530 + Silent SNP T T A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 TTC39B 158219 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 15211317 15211317 + Silent SNP C C T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 TTN 7273 hgsc.bcm.edu;ucsc.edu 37 2 179642494 179642494 + Frame_Shift_Del DEL T T - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 UBQLNL 143630 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 5537653 5537653 + Nonsense_Mutation SNP G G A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 USP43 124739 broad.mit.edu;ucsc.edu 37 17 9559806 9559806 + Silent SNP A G G novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ZKSCAN1 7586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 99631276 99631276 + Missense_Mutation SNP G G C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 ZNF518A 9849 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 97920188 97920188 + Missense_Mutation SNP T T C novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 JMJD7-PLA2G4B 8681 broad.mit.edu 37 15 42137191 42137191 + Missense_Mutation SNP G A A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 KIAA1598 57698 broad.mit.edu 37 10 118645923 118645923 + Missense_Mutation SNP C T T novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 KRT1 3848 broad.mit.edu 37 12 53069236 53069256 + In_Frame_Del DEL TAGCTGCTACCTCCGGAGCCA - - novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 TAGCTGCTACCTCCGGAGCCA TAGCTGCTACCTCCGGAGCCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 LOC100133050 100133050 broad.mit.edu 37 5 99715528 99715528 + RNA SNP C T T rs71636707 TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 MEX3A 92312 broad.mit.edu 37 1 156046832 156046832 + Missense_Mutation SNP C A A novel TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2 VHL 7428 broad.mit.edu 37 3 10183725 10183725 + Missense_Mutation SNP C G G rs5030826 alternate_allele TCGA-B0-5077-01A-01D-1462-08 TCGA-B0-5077-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 587f2bd8-952a-4f31-98e7-7654c80b8a99 7ca07cb9-f606-4911-ad93-3a3dd65a84d2