Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMDEC1 27299 hgsc.bcm.edu;ucsc.edu 37 8 24254839 24254839 + Missense_Mutation SNP A A G novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 ADCY1 107 hgsc.bcm.edu 37 7 45697340 45697340 + Missense_Mutation SNP C C A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 AK2 204 hgsc.bcm.edu 37 1 33478920 33478920 + Silent SNP G G A rs111261425 bycluster;byfrequency TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 ATF1 466 hgsc.bcm.edu;ucsc.edu 37 12 51213502 51213502 + Missense_Mutation SNP T T G novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 C7orf28B 0 hgsc.bcm.edu 37 7 6844681 6844681 + Missense_Mutation SNP C C T rs8058 TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 CLCN3 1182 hgsc.bcm.edu 37 4 170611793 170611793 + Missense_Mutation SNP G G A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 CR2 1380 hgsc.bcm.edu 37 1 207644230 207644230 + Silent SNP G G T novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 DNHD1 144132 hgsc.bcm.edu 37 11 6567890 6567890 + Missense_Mutation SNP G G T novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 EVPL 2125 hgsc.bcm.edu 37 17 74023229 74023229 + Silent SNP G G A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 FAM59A 0 hgsc.bcm.edu;ucsc.edu 37 18 29868022 29868022 + Missense_Mutation SNP T T G novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 FAM90A1 55138 hgsc.bcm.edu 37 12 8374782 8374783 + In_Frame_Ins INS - - CGG novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 FAT2 2196 hgsc.bcm.edu;ucsc.edu 37 5 150897291 150897291 + Silent SNP G G T novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 FBXW5 54461 hgsc.bcm.edu 37 9 139837902 139837902 + Nonsense_Mutation SNP C C A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 GDF3 9573 hgsc.bcm.edu 37 12 7843115 7843115 + Nonsense_Mutation SNP C C A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 HK1 3098 hgsc.bcm.edu 37 10 71048514 71048514 + Nonsense_Mutation SNP C C A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 HVCN1 84329 hgsc.bcm.edu 37 12 111099084 111099084 + Missense_Mutation SNP C C T novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 KRT10 3858 hgsc.bcm.edu;ucsc.edu 37 17 38977371 38977371 + Splice_Site SNP T T A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 LRP1B 53353 hgsc.bcm.edu 37 2 141665553 141665553 + Missense_Mutation SNP G G A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 MUC4 4585 hgsc.bcm.edu 37 3 195512343 195512343 + Silent SNP G G A rs113457754 bycluster TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 MYO3A 53904 hgsc.bcm.edu 37 10 26385322 26385322 + Silent SNP T T C novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 NMUR1 10316 hgsc.bcm.edu 37 2 232393300 232393300 + Silent SNP G G C novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 PTGFR 5737 hgsc.bcm.edu 37 1 78958515 78958515 + Silent SNP C C A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 PTK6 5753 hgsc.bcm.edu;ucsc.edu 37 20 62164915 62164915 + Missense_Mutation SNP A A T novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 SETDB1 9869 hgsc.bcm.edu 37 1 150923431 150923431 + Missense_Mutation SNP G G A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 SGK269 0 hgsc.bcm.edu;ucsc.edu 37 15 77407253 77407253 + Silent SNP G G A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 SRPX2 27286 hgsc.bcm.edu;ucsc.edu 37 X 99922295 99922295 + Missense_Mutation SNP A A G novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 TRIB1 10221 hgsc.bcm.edu 37 8 126448323 126448323 + Silent SNP T T C novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 USP43 124739 hgsc.bcm.edu 37 17 9604523 9604523 + Silent SNP C C A novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 VHL 7428 hgsc.bcm.edu;ucsc.edu 37 3 10191558 10191558 + Missense_Mutation SNP T T C novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7 VSTM1 284415 hgsc.bcm.edu 37 19 54561641 54561641 + Missense_Mutation SNP C C G novel TCGA-BP-4771-01A-01D-1366-10 TCGA-BP-4771-11A-01D-1367-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID e1c00898-84ed-4fcb-b167-be6464a960e3 319a361d-cb17-4a06-89dc-421b28936aa7