Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AHDC1 27245 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 27874262 27874262 + Silent SNP G G A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ASAH1 427 hgsc.bcm.edu 37 8 17942197 17942203 + Frame_Shift_Del DEL AGCAAAG AGCAAAG - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 AGCAAAG AGCAAAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ATF7IP 55729 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 14613557 14613557 + Missense_Mutation SNP G G C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 BSND 7809 hgsc.bcm.edu;ucsc.edu 37 1 55464986 55464986 + Missense_Mutation SNP G G A rs34561376 bycluster;byfrequency;by1000genomes TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 BTBD2 55643 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 1993133 1993133 + Silent SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 C20orf46 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 1162182 1162183 + Frame_Shift_Ins INS - - G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 C6orf89 221477 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 36882108 36882108 + Missense_Mutation SNP C C A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CASP5 838 hgsc.bcm.edu 37 11 104879687 104879687 + Frame_Shift_Del DEL T T - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CEP192 55125 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 13114196 13114196 + Missense_Mutation SNP A A C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CFTR 1080 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 117232369 117232369 + Missense_Mutation SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CHIT1 1118 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 203188874 203188874 + Missense_Mutation SNP T T A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CHST9 83539 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 24496340 24496340 + Silent SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CNKSR2 22866 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 21667030 21667030 + Missense_Mutation SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CSMD3 114788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 113277723 113277723 + Missense_Mutation SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CYFIP2 26999 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 156810297 156810297 + Missense_Mutation SNP T T G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CYP46A1 10858 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 100166423 100166423 + Missense_Mutation SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 CYP7A1 1581 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 59404310 59404310 + Silent SNP A A C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 DOM3Z 1797 broad.mit.edu;hgsc.bcm.edu 37 6 31939426 31939426 + Silent SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 EIF2C3 192669 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 36499790 36499790 + Missense_Mutation SNP T T G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 FAM135A 57579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 71185175 71185175 + Missense_Mutation SNP A A G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 FSCN1 6624 broad.mit.edu;hgsc.bcm.edu 37 7 5632985 5632985 + Missense_Mutation SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 GAGE12J 729396 broad.mit.edu;hgsc.bcm.edu 37 X 49179737 49179737 + Missense_Mutation SNP A A T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 GPRASP1 9737 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 101912814 101912815 + Frame_Shift_Ins INS - - T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 HK1 3098 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 71103744 71103744 + Silent SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 IGSF8 93185 broad.mit.edu;hgsc.bcm.edu 37 1 160063938 160063938 + Missense_Mutation SNP A A G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 IRX3 79191 broad.mit.edu;hgsc.bcm.edu 37 16 54319294 54319294 + Missense_Mutation SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ITGA10 8515 broad.mit.edu;hgsc.bcm.edu 37 1 145534208 145534208 + Silent SNP G G A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ITGA1 3672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 52221264 52221264 + Missense_Mutation SNP A A T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ITM2A 9452 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 78618083 78618083 + Silent SNP G G A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 KCNK2 3776 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 215408257 215408257 + Silent SNP G G A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 KIF13A 63971 broad.mit.edu;hgsc.bcm.edu 37 6 17850652 17850652 + Missense_Mutation SNP G G C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 KRT4 3851 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 53207945 53207945 + Silent SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MAGEE1 57692 broad.mit.edu;hgsc.bcm.edu 37 X 75649863 75649863 + Nonsense_Mutation SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MAP9 79884 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 156281456 156281457 + Frame_Shift_Ins INS - - T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MDN1 23195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 90399594 90399595 + Frame_Shift_Ins INS - - G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MGEA5 10724 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 103557823 103557823 + Missense_Mutation SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MLL2 8085 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49425039 49425039 + Silent SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MTHFD1 4522 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 64855180 64855180 + Missense_Mutation SNP T T A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 MYO1E 4643 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 59470597 59470597 + Missense_Mutation SNP C C G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 NEB 4703 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 152362014 152362014 + Frame_Shift_Del DEL T T - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T T - T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 NELL2 4753 broad.mit.edu;hgsc.bcm.edu 37 12 44917251 44917251 + Silent SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 NOD2 64127 broad.mit.edu;ucsc.edu 37 16 50745117 50745117 + Missense_Mutation SNP C T T rs2076754 bycluster;byfrequency TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PAIP1 10605 broad.mit.edu;hgsc.bcm.edu 37 5 43543190 43543190 + Missense_Mutation SNP A A T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PELP1 27043 hgsc.bcm.edu;ucsc.edu 37 17 4577915 4577915 + Frame_Shift_Del DEL G G - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PER1 5187 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 8048306 8048306 + Missense_Mutation SNP T T A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PRKD2 25865 hgsc.bcm.edu;ucsc.edu 37 19 47177890 47177899 + Frame_Shift_Del DEL CTGCTGCAAA CTGCTGCAAA - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 CTGCTGCAAA CTGCTGCAAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PTPDC1 138639 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 96870182 96870183 + Frame_Shift_Ins INS - - A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PTPRC 5788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 198687421 198687421 + Frame_Shift_Del DEL A A - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 PZP 5858 hgsc.bcm.edu 37 12 9305862 9305862 + Silent SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 RABGAP1L 9910 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 174245014 174245014 + Missense_Mutation SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 RIMKLA 284716 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 42880262 42880262 + Missense_Mutation SNP G G C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 RINL 126432 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 39361507 39361507 + Missense_Mutation SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 RNASE8 122665 broad.mit.edu;ucsc.edu 37 14 21526326 21526326 + Missense_Mutation SNP G T T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 RPL5 6125 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 93299160 93299160 + Nonsense_Mutation SNP C C A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 RXRG 6258 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 165386398 165386398 + Missense_Mutation SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SEC24A 10802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 133996855 133996855 + Missense_Mutation SNP A A C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SEZ6 124925 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27308944 27308944 + Missense_Mutation SNP A A C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SLC12A4 6560 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 67979424 67979424 + Silent SNP C C A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SLC7A14 57709 broad.mit.edu;hgsc.bcm.edu 37 3 170244556 170244556 + Missense_Mutation SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SLITRK4 139065 hgsc.bcm.edu 37 X 142717055 142717058 + Frame_Shift_Del DEL TACT TACT - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 TACT TACT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SOS1 6654 broad.mit.edu;hgsc.bcm.edu 37 2 39222302 39222302 + Missense_Mutation SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SPDEF 25803 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 34506194 34506194 + Missense_Mutation SNP G G A rs148079586 TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SPECC1 92521 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 20130773 20130773 + Silent SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SPSB3 90864 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 1828480 1828480 + Missense_Mutation SNP G G A rs150535227 TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 SRSF6 6431 broad.mit.edu;hgsc.bcm.edu 37 20 42087921 42087921 + RNA SNP A A G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 STAT5B 6777 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 40359718 40359718 + Silent SNP A A G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 TCEB2 6923 hgsc.bcm.edu 37 16 2825480 2825481 + Frame_Shift_Ins INS - - G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 TMEM150A 129303 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 85828149 85828149 + Silent SNP G G T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 TXLNA 200081 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 32646917 32646917 + Missense_Mutation SNP A A C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 USP8 9101 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 50763851 50763851 + Silent SNP A A G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10188263 10188263 + Missense_Mutation SNP T T G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 WWC2 80014 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 184175071 184175071 + Frame_Shift_Del DEL A A - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ZDHHC22 283576 broad.mit.edu;hgsc.bcm.edu 37 14 77600035 77600035 + Missense_Mutation SNP C C G novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ZFPM2 23414 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 106813474 106813474 + Silent SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ZIC5 85416 broad.mit.edu;hgsc.bcm.edu 37 13 100622569 100622569 + Missense_Mutation SNP T T C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ZIM3 114026 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 57646763 57646763 + Silent SNP C C T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 C17orf97 400566 broad.mit.edu 37 17 263315 263315 + Silent SNP C T T rs71356792 bycluster TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 DACH1 1602 broad.mit.edu 37 13 72204836 72204836 + Silent SNP G A A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 FLJ43859 0 broad.mit.edu 37 9 84547720 84547720 + Missense_Mutation SNP G C C rs815819 bycluster;by2hit2allele TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 LOC645752 645752 broad.mit.edu 37 15 78207569 78207569 + Missense_Mutation SNP G A A rs56314252 byfrequency;by1000genomes TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 NLN 57486 broad.mit.edu 37 5 65088386 65088386 + Silent SNP A C C novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 POLRMT 5442 broad.mit.edu 37 19 632854 632854 + Frame_Shift_Del DEL C - - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ST5 6764 broad.mit.edu 37 11 8752274 8752274 + Missense_Mutation SNP C A A novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 Unknown 0 broad.mit.edu 37 2 90249300 90249300 + RNA DEL G - - novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350 ZNF765 91661 broad.mit.edu 37 19 53926630 53926630 + RNA SNP C T T novel TCGA-BP-4967-01A-01D-1462-08 TCGA-BP-4967-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 75866d14-47d5-4560-a5a0-32ba3e15ac63 dd634438-8fad-4ff4-b306-f372c978a350