Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACAP2 23527 hgsc.bcm.edu;ucsc.edu 37 3 195016613 195016613 + Missense_Mutation SNP T T G novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 ANKS1B 56899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 99194855 99194855 + Missense_Mutation SNP C C T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 C17orf97 400566 hgsc.bcm.edu 37 17 263294 263294 + Missense_Mutation SNP C C G rs35229416 bycluster;byfrequency;by1000genomes TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 CEP57L1 285753 broad.mit.edu;hgsc.bcm.edu 37 6 109484145 109484145 + Missense_Mutation SNP G G T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 CRELD1 78987 broad.mit.edu;hgsc.bcm.edu 37 3 9982650 9982650 + Missense_Mutation SNP G G A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 FAM76A 199870 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 28060630 28060630 + Missense_Mutation SNP C C T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 FAM83G 644815 hgsc.bcm.edu 37 17 18874924 18874925 + Frame_Shift_Ins INS - - C novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 GABRR1 2569 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 89891701 89891701 + Missense_Mutation SNP G G T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 HEATR1 55127 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 236766491 236766491 + Missense_Mutation SNP C C T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 KLHL8 57563 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 88106697 88106697 + Silent SNP A A G novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 MAP3K5 4217 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 136972151 136972151 + Missense_Mutation SNP A A C novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 MARK1 4139 broad.mit.edu;hgsc.bcm.edu 37 1 220835248 220835248 + Missense_Mutation SNP A A G novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 A A A G A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 MED1 5469 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 37565879 37565879 + Silent SNP G G A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 METTL13 51603 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 171753287 171753287 + Silent SNP C C T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 METTL13 51603 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 171756896 171756896 + Missense_Mutation SNP G G A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 PKHD1L1 93035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 110412378 110412378 + Missense_Mutation SNP T T A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 POLA1 5422 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 24735484 24735484 + Missense_Mutation SNP G G A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 PRKDC 5591 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 48767813 48767813 + Missense_Mutation SNP C C T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 REG3G 130120 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 79255044 79255044 + Missense_Mutation SNP C C A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 RFPL1 5988 hgsc.bcm.edu 37 22 29834853 29834853 + Frame_Shift_Del DEL C C - novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 RYR3 6263 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 33873752 33873752 + Missense_Mutation SNP T T C novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 SHROOM4 57477 hgsc.bcm.edu 37 X 50350758 50350758 + Silent SNP C C T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 SLC11A1 6556 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 219254723 219254723 + Missense_Mutation SNP C C A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 UCP1 7350 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 141484270 141484270 + Missense_Mutation SNP A A T novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 ZNF320 162967 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53385021 53385021 + Missense_Mutation SNP T T C novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 ZNF320 162967 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53385022 53385022 + Missense_Mutation SNP C C A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 DHX33 56919 broad.mit.edu 37 17 5372140 5372140 + Missense_Mutation SNP G A A novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 ESPNP 284729 broad.mit.edu 37 1 17023403 17023403 + Silent SNP G A A rs10907267 bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 LMAN2 10960 broad.mit.edu 37 5 176778599 176778599 + Missense_Mutation SNP A G G novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2 YEATS4 8089 broad.mit.edu 37 12 69756582 69756582 + Silent SNP T G G novel TCGA-BP-4974-01A-01D-1462-08 TCGA-BP-4974-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 3e787cd9-fd58-4818-b68f-19ce1550c566 6bc3f689-898a-431d-b2ca-9661ecf14ac2