Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS6 11174 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 64510620 64510620 + Splice_Site SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f ADCY9 115 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 4043480 4043480 + Missense_Mutation SNP G G T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f ADCY9 115 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 4043482 4043482 + Silent SNP A A T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f AGAP6 414189 hgsc.bcm.edu 37 10 51748682 51748682 + Frame_Shift_Del DEL C C - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f AP1G1 164 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71789925 71789925 + Missense_Mutation SNP T T C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f BAP1 8314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52443568 52443568 + Splice_Site SNP A A G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A A G A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f BDP1 55814 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 70808132 70808132 + Missense_Mutation SNP A A G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f C12orf39 80763 broad.mit.edu;ucsc.edu 37 12 21679901 21679901 + Splice_Site SNP G T T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CA7 766 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 66887326 66887326 + Missense_Mutation SNP G G T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CAPN9 10753 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 230910375 230910375 + Missense_Mutation SNP C C A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CCDC62 84660 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 123307924 123307924 + Silent SNP C C A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CCNF 899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 2503516 2503516 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CFHR2 3080 hgsc.bcm.edu;ucsc.edu 37 1 196918739 196918739 + Silent SNP G G A rs61746417 bycluster;byfrequency;by1000genomes TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CNKSR1 10256 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 26513674 26513674 + Missense_Mutation SNP G G A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f COL21A1 81578 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 56035909 56035909 + Nonsense_Mutation SNP G G A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f CWH43 80157 broad.mit.edu;hgsc.bcm.edu 37 4 49019269 49019269 + Missense_Mutation SNP T T C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f DENND2D 79961 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 111741341 111741341 + Missense_Mutation SNP C C A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f DTNB 1838 broad.mit.edu;ucsc.edu 37 2 25754451 25754451 + Nonsense_Mutation SNP T A A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f ESRRA 2101 hgsc.bcm.edu 37 11 64083296 64083298 + In_Frame_Del DEL GGG GGG - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 GGG GGG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f FBXL13 222235 broad.mit.edu;hgsc.bcm.edu 37 7 102665656 102665656 + Silent SNP A A G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f FREM3 166752 hgsc.bcm.edu;ucsc.edu 37 4 144618993 144618993 + Missense_Mutation SNP A A G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f GPN1 11321 hgsc.bcm.edu;ucsc.edu 37 2 27861049 27861049 + RNA SNP T T A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f GRM6 2916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 178416292 178416292 + Nonsense_Mutation SNP G G C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f HBZ 3050 hgsc.bcm.edu 37 16 203950 203951 + Frame_Shift_Ins INS - - GTCC novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f HNRNPC 3183 broad.mit.edu;hgsc.bcm.edu 37 14 21699200 21699200 + Missense_Mutation SNP G G T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f IL19 29949 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 207014376 207014376 + Nonsense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f ITPR3 3710 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 33657132 33657132 + Missense_Mutation SNP G G A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f KIAA1210 57481 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 118219357 118219357 + Missense_Mutation SNP G G T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f KIFAP3 22920 hgsc.bcm.edu;ucsc.edu 37 1 170003574 170003574 + Frame_Shift_Del DEL A A - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f KRTAP1-1 81851 hgsc.bcm.edu 37 17 39197609 39197609 + Missense_Mutation SNP C C A rs138200823 by1000genomes TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f KRTAP1-1 81851 hgsc.bcm.edu 37 17 39197614 39197614 + Silent SNP G G A rs141856614 by1000genomes TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f LRRC10 376132 broad.mit.edu;hgsc.bcm.edu 37 12 70003903 70003903 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f MAML3 55534 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 140640547 140640547 + Missense_Mutation SNP T T C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f MAST4 375449 broad.mit.edu;ucsc.edu 37 5 66462005 66462005 + Missense_Mutation SNP A T T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f MBL2 4153 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 54527937 54527937 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f METTL3 56339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 21966492 21966492 + Silent SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f METTL3 56339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 21967449 21967449 + Splice_Site SNP C C G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f METTL3 56339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 21967512 21967512 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f METTL3 56339 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 21967647 21967647 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f MKKS 8195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 10393658 10393658 + Missense_Mutation SNP T T C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f MUC4 4585 hgsc.bcm.edu 37 3 195506760 195506760 + Silent SNP T T A rs62282473 by1000genomes TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f NCOR2 9612 hgsc.bcm.edu 37 12 124887093 124887093 + Silent SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f NEDD4L 23327 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 55992365 55992365 + Silent SNP G G A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f NPFFR2 10886 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 73013282 73013282 + Missense_Mutation SNP A A T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f OGN 4969 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 95165563 95165563 + Missense_Mutation SNP A A C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f OR8D4 338662 broad.mit.edu;ucsc.edu 37 11 123777914 123777914 + Missense_Mutation SNP A T T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f PAK6 56924 hgsc.bcm.edu;ucsc.edu 37 15 40564552 40564552 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f PAPOLB 56903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 4899654 4899654 + Silent SNP G G A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f PARP4 143 hgsc.bcm.edu;ucsc.edu 37 13 25034117 25034117 + Frame_Shift_Del DEL T T - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f PDE1B 5153 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 54971106 54971106 + Silent SNP G G A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f RPTOR 57521 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 78935234 78935234 + Missense_Mutation SNP A A C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f SART3 9733 hgsc.bcm.edu;ucsc.edu 37 12 108941708 108941708 + Frame_Shift_Del DEL C C - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f SLC13A2 9058 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 26820678 26820678 + Missense_Mutation SNP G G T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f SLC44A5 204962 broad.mit.edu;ucsc.edu 37 1 75681492 75681492 + Missense_Mutation SNP A G G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f ST3GAL1 6482 broad.mit.edu;ucsc.edu 37 8 134478309 134478309 + Missense_Mutation SNP T C C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f SUZ12 23512 hgsc.bcm.edu 37 17 30310080 30310080 + Frame_Shift_Del DEL T T - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f TMC8 147138 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 76134202 76134202 + Missense_Mutation SNP T T A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10191513 10191513 + Missense_Mutation SNP T T C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f VHL 7428 hgsc.bcm.edu 37 3 10183665 10183665 + Missense_Mutation SNP C C T novel TCGA-CJ-4636-01A-02W-1382-10 TCGA-CJ-4636-11A-01W-1244-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq c437a272-1a90-4b2d-bf5b-e3602527c210 5b191139-f06e-4add-a934-f6116591658f WDR77 79084 broad.mit.edu;hgsc.bcm.edu 37 1 111989749 111989749 + Missense_Mutation SNP A A C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f ZFPM2 23414 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 106815071 106815071 + Missense_Mutation SNP A A C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f C10orf140 0 broad.mit.edu 37 10 21805466 21805467 + In_Frame_Ins INS - CCTCCT CCTCCT rs112207161 bycluster;by1000genomes TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f EPPK1 83481 broad.mit.edu 37 8 144942850 144942850 + Silent SNP G A A novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f FAM131C 348487 broad.mit.edu 37 1 16361925 16361925 + Silent SNP G A A rs75208590 TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f HGC6.3 100128124 broad.mit.edu 37 6 168377220 168377220 + Missense_Mutation SNP T G G rs79173693 by1000genomes TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f NBPF9 400818 broad.mit.edu 37 1 144813815 144813815 + Silent SNP A G G novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f PNLDC1 154197 broad.mit.edu 37 6 160240368 160240368 + Missense_Mutation SNP G A A rs138386704 TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f RTF1 23168 broad.mit.edu 37 15 41769654 41769654 + Splice_Site SNP A T T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f SYT4 6860 broad.mit.edu 37 18 40853880 40853880 + Missense_Mutation SNP C T T novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f TRIB3 57761 broad.mit.edu 37 20 377225 377225 + Frame_Shift_Del DEL C - - novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f WASH3P 374666 broad.mit.edu 37 15 102516424 102516424 + Silent SNP G T T rs71252253 bycluster;byfrequency TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f SECISBP2L 9728 broad.mit.edu 37 15 49301547 49301547 + Silent SNP A C C novel TCGA-CJ-4636-01A-02D-1386-10 TCGA-CJ-4636-11A-01D-1251-10 A A A C A A Unknown Valid Somatic Phase_I WXS PGM . . Illumina GAIIx 0e5bd693-fb80-426a-bde3-16f33938ea45 769417fc-b475-4126-854a-409b97cdcb2f