Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS12 81792 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 33881335 33881335 + Silent SNP G G C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ADAMTS2 9509 broad.mit.edu;hgsc.bcm.edu 37 5 178548695 178548695 + Missense_Mutation SNP C C G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ADAMTS5 11096 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 28337626 28337626 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ADCY8 114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 131916170 131916170 + Missense_Mutation SNP T T G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ALDH8A1 64577 hgsc.bcm.edu;ucsc.edu 37 6 135254009 135254009 + Missense_Mutation SNP G G T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ANAPC16 119504 hgsc.bcm.edu 37 10 73992824 73992825 + Frame_Shift_Ins INS - - G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ANGPT4 51378 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 896633 896633 + Silent SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ARL8B 55207 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 5215726 5215726 + Missense_Mutation SNP G G C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ATP6V0A4 50617 broad.mit.edu;ucsc.edu 37 7 138417832 138417832 + Silent SNP G A A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da C20orf194 25943 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 3278767 3278767 + Missense_Mutation SNP G G C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da C5orf28 64417 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 43446548 43446548 + Missense_Mutation SNP A A T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CABLES1 91768 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 20814600 20814600 + Missense_Mutation SNP T T C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CC2D1A 54862 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 14034594 14034594 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CCDC81 60494 broad.mit.edu;ucsc.edu 37 11 86097136 86097136 + Silent SNP G T T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CCDC81 60494 broad.mit.edu;ucsc.edu 37 11 86097137 86097137 + Nonsense_Mutation SNP C T T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CDH11 1009 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 64981780 64981780 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CREB3L4 148327 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 153946103 153946103 + Missense_Mutation SNP T T A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CSMD2 114784 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 34238249 34238249 + Silent SNP G G A rs142181378 TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da DHX29 54505 hgsc.bcm.edu;ucsc.edu 37 5 54569200 54569201 + Frame_Shift_Ins INS - - TA novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da DIS3 22894 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 73336063 73336063 + Missense_Mutation SNP T T G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da FAM83B 222584 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 54806400 54806400 + Missense_Mutation SNP C C G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da FBF1 85302 hgsc.bcm.edu;ucsc.edu 37 17 73927360 73927360 + Missense_Mutation SNP C C A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da FBXO42 54455 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 16577186 16577186 + Nonsense_Mutation SNP G G C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da FCGBP 8857 broad.mit.edu;hgsc.bcm.edu 37 19 40376809 40376809 + Silent SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da GGTLC1 92086 broad.mit.edu;hgsc.bcm.edu 37 20 23966339 23966339 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da GPR37L1 9283 broad.mit.edu;hgsc.bcm.edu 37 1 202097558 202097558 + Silent SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ITIH5L 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 54785277 54785277 + Silent SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da KBTBD6 89890 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 41706026 41706026 + Missense_Mutation SNP A A C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da KCNQ3 3786 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 133141908 133141908 + Silent SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da KCTD7 154881 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 66103318 66103318 + Nonsense_Mutation SNP C C G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da LEF1 51176 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 109004590 109004590 + Missense_Mutation SNP T T G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da LHX1 3975 hgsc.bcm.edu;ucsc.edu 37 17 35295520 35295520 + Frame_Shift_Del DEL G G - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MADD 8567 hgsc.bcm.edu;ucsc.edu 37 11 47299728 47299730 + In_Frame_Del DEL CCA CCA - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 CCA CCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MAST4 375449 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 66460450 66460450 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MDGA1 266727 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 37606075 37606075 + Silent SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MOSPD3 64598 broad.mit.edu;hgsc.bcm.edu 37 7 100211260 100211260 + Missense_Mutation SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MUC4 4585 hgsc.bcm.edu 37 3 195507215 195507262 + In_Frame_Del DEL GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MUC4 4585 hgsc.bcm.edu 37 3 195509031 195509078 + In_Frame_Del DEL GGTGACAGGAAGAGCGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTC GGTGACAGGAAGAGCGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTC - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 GGTGACAGGAAGAGCGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTC GGTGACAGGAAGAGCGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NCOA2 10499 hgsc.bcm.edu;ucsc.edu 37 8 71068322 71068322 + Missense_Mutation SNP G G T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NCOA5 57727 broad.mit.edu;hgsc.bcm.edu 37 20 44692013 44692013 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NDST2 8509 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 75567375 75567375 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NKTR 4820 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 42680080 42680080 + Missense_Mutation SNP G G T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NMT1 4836 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 43173564 43173564 + Silent SNP A A C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NPHP3 27031 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 132409424 132409424 + Missense_Mutation SNP T T G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da OLFML2B 25903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 161953786 161953786 + Missense_Mutation SNP C C G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PARP9 83666 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 122247559 122247559 + Silent SNP G G C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PCSK9 255738 broad.mit.edu;hgsc.bcm.edu 37 1 55529175 55529175 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da POC1B-GALNT4 100528030 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 89917147 89917147 + Missense_Mutation SNP A A T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PPP1R9A 55607 hgsc.bcm.edu;ucsc.edu 37 7 94919499 94919499 + Frame_Shift_Del DEL A A - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PPP2R3B 28227 hgsc.bcm.edu;ucsc.edu 37 X 322172 322172 + Frame_Shift_Del DEL C C - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PRR23A 729627 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 138724479 138724479 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PRRC2A 7916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 31598498 31598498 + Silent SNP C C A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da RAI2 10742 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 17819773 17819773 + Missense_Mutation SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da RNLS 55328 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 90122392 90122392 + Missense_Mutation SNP A A G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SCN3A 6328 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 165948825 165948825 + Missense_Mutation SNP G G C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SCN9A 6335 hgsc.bcm.edu;ucsc.edu 37 2 167137006 167137006 + Frame_Shift_Del DEL T T - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SDC3 9672 hgsc.bcm.edu;ucsc.edu 37 1 31347255 31347255 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SDK1 221935 hgsc.bcm.edu 37 7 4007044 4007045 + Frame_Shift_Ins INS - - C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SRRM2 23524 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 2809006 2809006 + Missense_Mutation SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da TJP1 7082 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 30064288 30064288 + Missense_Mutation SNP T T G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da TLCD1 116238 broad.mit.edu;hgsc.bcm.edu 37 17 27052361 27052361 + Missense_Mutation SNP C C G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da TSPAN5 10098 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 99397581 99397581 + Missense_Mutation SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da VHL 7428 hgsc.bcm.edu 37 3 10183864 10183864 + Missense_Mutation SNP C C A novel TCGA-CJ-5675-01A-11W-1584-10 TCGA-CJ-5675-11A-01W-1585-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq 6b33ad1e-6eed-4a96-b8e3-360f12c58ea7 c5a65315-0c2c-46a1-b8b9-ea114ce12fec WDR35 57539 broad.mit.edu;ucsc.edu 37 2 20138115 20138115 + Silent SNP C G G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ZBTB49 166793 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 4303969 4303969 + Silent SNP C C T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ZFHX3 463 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 72993014 72993014 + Missense_Mutation SNP T T A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ZNF407 55628 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 72346773 72346773 + Silent SNP T T C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ZNF763 284390 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 12089265 12089265 + Missense_Mutation SNP G G A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da ZNF814 730051 broad.mit.edu;hgsc.bcm.edu 37 19 58386268 58386268 + Missense_Mutation SNP G G T novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da CARNS1 57571 broad.mit.edu 37 11 67191044 67191044 + Missense_Mutation SNP C A A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da LILRA6 79168 broad.mit.edu 37 19 54744735 54744735 + Silent SNP G A A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MST1P2 11209 broad.mit.edu 37 1 16973855 16973855 + RNA SNP G A A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da MYO10 4651 broad.mit.edu 37 5 16674991 16674991 + Silent SNP A G G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NR4A1 3164 broad.mit.edu 37 12 52452615 52452615 + Missense_Mutation SNP C A A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da NT5M 56953 broad.mit.edu 37 17 17250185 17250185 + Missense_Mutation SNP T C C novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PLEC 5339 broad.mit.edu 37 8 144995868 144995868 + Silent SNP A G G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da PLXNA1 5361 broad.mit.edu 37 3 126733641 126733641 + Nonsense_Mutation SNP C A A novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SARDH 1757 broad.mit.edu 37 9 136577831 136577831 + Missense_Mutation SNP C G G novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da SNX21 90203 broad.mit.edu 37 20 44463023 44463037 + In_Frame_Del DEL GACGAGGACGACGAG - - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 GACGAGGACGACGAG GACGAGGACGACGAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da Unknown 0 broad.mit.edu 37 4 13659429 13659429 + RNA DEL A - - novel TCGA-CJ-5675-01A-11D-1534-10 TCGA-CJ-5675-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 78b7e188-9252-48b6-9e10-04eb8690b879 bfa15fdf-d1f5-4e0c-986f-c888e0cf77da