Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID A1CF 29974 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 52566613 52566613 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ACADVL 37 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7125374 7125374 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ANKMY1 51281 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 241496637 241496637 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ATF7IP2 80063 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 10524764 10524764 + Missense_Mutation SNP T T G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T T G T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ATP10A 57194 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 25959134 25959134 + Nonsense_Mutation SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c C14orf135 0 broad.mit.edu;ucsc.edu 37 14 60600702 60600703 + Frame_Shift_Del DEL GA - - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 GA GA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c C16orf78 123970 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 49407979 49407979 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c C20orf4 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 34828159 34828159 + Silent SNP G G C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CA4 762 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 58234007 58234007 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CCDC155 147872 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 49897747 49897747 + Missense_Mutation SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CCDC53 51019 hgsc.bcm.edu;ucsc.edu 37 12 102433684 102433684 + Frame_Shift_Del DEL C C - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CEP110 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 123900914 123900914 + Missense_Mutation SNP A A T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CLASP1 23332 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 122168512 122168512 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CLCN2 1181 broad.mit.edu;ucsc.edu 37 3 184070571 184070571 + Missense_Mutation SNP A G G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CNGA1 1259 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 47944154 47944154 + Missense_Mutation SNP T T A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c COPA 1314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 160310032 160310032 + Silent SNP C C A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CPSF3 51692 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 9580730 9580730 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CUL7 9820 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 43020004 43020004 + Missense_Mutation SNP A A C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c CYP2D6 1565 hgsc.bcm.edu 37 22 42524795 42524795 + Silent SNP A A G rs28371713 bycluster;byfrequency TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DCAF12L1 139170 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 125686496 125686496 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DDX53 168400 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 23019821 23019821 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DENND5B 160518 hgsc.bcm.edu;ucsc.edu 37 12 31540603 31540603 + Frame_Shift_Del DEL A A - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DHX37 57647 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 125438720 125438720 + Missense_Mutation SNP T T C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DMXL1 1657 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 118560454 118560454 + Silent SNP T T C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DNAH9 1770 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 11701032 11701032 + Missense_Mutation SNP T T C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T T C T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c DNAH9 1770 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 11835416 11835416 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ECHS1 1892 broad.mit.edu;hgsc.bcm.edu 37 10 135184121 135184121 + Missense_Mutation SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c EHD1 10938 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 64645859 64645859 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c EIF3B 8662 broad.mit.edu;ucsc.edu 37 7 2404084 2404084 + Silent SNP A G G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c EPB41L3 23136 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 5406847 5406847 + Missense_Mutation SNP A A T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ERCC5 2073 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 103528030 103528030 + Missense_Mutation SNP T T C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ETAA1 54465 hgsc.bcm.edu;ucsc.edu 37 2 67637078 67637096 + Frame_Shift_Del DEL GAAATTCAGAGAAAAAGAC GAAATTCAGAGAAAAAGAC - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 GAAATTCAGAGAAAAAGAC GAAATTCAGAGAAAAAGAC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c FAM123B 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 63412535 63412535 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GALNTL5 168391 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 151684336 151684336 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GATA2 2624 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 128204803 128204803 + Missense_Mutation SNP T T A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GPR1 2825 hgsc.bcm.edu;ucsc.edu 37 2 207041953 207041953 + Frame_Shift_Del DEL T T - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GPR149 344758 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 154146980 154146980 + Missense_Mutation SNP G G T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GRIA1 2890 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 153149881 153149881 + Missense_Mutation SNP A A T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GRIK2 2898 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 102503283 102503283 + Missense_Mutation SNP A A G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GRIN3A 116443 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 104341505 104341505 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c GSG2 83903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 3629541 3629541 + Missense_Mutation SNP A A G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c HCCS 3052 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 11139773 11139773 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c HNF1B 6928 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 36091725 36091725 + Missense_Mutation SNP G G C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c IFT172 26160 hgsc.bcm.edu;ucsc.edu 37 2 27702943 27702946 + Frame_Shift_Del DEL ATAA ATAA - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 ATAA ATAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ITGB4 3691 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 73736440 73736440 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c KIAA1632 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 43492338 43492338 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LCMT2 9836 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 43621597 43621597 + Missense_Mutation SNP A A G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LILRB5 10990 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 54760026 54760026 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LOR 4014 hgsc.bcm.edu 37 1 153233488 153233489 + In_Frame_Ins INS - - GGCGGT novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LRCH3 84859 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 197557694 197557694 + Missense_Mutation SNP A A G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c MAN2A2 4122 broad.mit.edu;ucsc.edu 37 15 91449980 91449980 + Silent SNP C A A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c MAP3K15 389840 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 19389075 19389075 + Splice_Site SNP A A C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c MC3R 4159 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 54824370 54824370 + Silent SNP C C A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c MTOR 2475 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 11169375 11169375 + Missense_Mutation SNP A A C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A A C A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c MUC4 4585 broad.mit.edu;hgsc.bcm.edu 37 3 195538680 195538680 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c MUC5B 727897 hgsc.bcm.edu 37 11 1271392 1271392 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c NKRF 55922 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 118723545 118723545 + Missense_Mutation SNP G G T rs140452307 byfrequency;alternate_allele TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c NOC4L 79050 broad.mit.edu;ucsc.edu 37 12 132636049 132636049 + Missense_Mutation SNP T C C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c NOS3 4846 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 150697631 150697631 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c NUPL1 9818 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 25899186 25899186 + Missense_Mutation SNP T T G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ODZ1 0 hgsc.bcm.edu;ucsc.edu 37 X 123556363 123556363 + Frame_Shift_Del DEL G G - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c OR1E1 8387 hgsc.bcm.edu 37 17 3301113 3301113 + Frame_Shift_Del DEL C C - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c OR3A1 4994 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 3195481 3195481 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c OR7A5 26659 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 14938974 14938974 + Missense_Mutation SNP A A G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52588748 52588748 + Frame_Shift_Del DEL G G - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G G - G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c PDZD3 79849 broad.mit.edu;hgsc.bcm.edu 37 11 119059909 119059909 + Missense_Mutation SNP G G C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c PLXND1 23129 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 129286540 129286540 + Splice_Site SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c PPFIBP1 8496 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 27824429 27824429 + Silent SNP T T C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c PTAR1 375743 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 72338543 72338543 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c RBM45 129831 hgsc.bcm.edu 37 2 178977303 178977304 + Frame_Shift_Ins INS - - G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c RDH11 51109 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 68151823 68151823 + Missense_Mutation SNP A A G rs182091562 by1000genomes TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c RIMKLA 284716 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 42880337 42880337 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c RPN2 6185 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 35842239 35842239 + Missense_Mutation SNP G G T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SCG2 7857 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 224462769 224462769 + Missense_Mutation SNP G G T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SCN3A 6328 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 165952091 165952091 + Missense_Mutation SNP A A G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SECISBP2L 9728 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 49293222 49293222 + Missense_Mutation SNP G G T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G G T G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SETD2 29072 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 47162024 47162024 + Nonsense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SLC35B3 51000 broad.mit.edu;hgsc.bcm.edu 37 6 8422803 8422803 + Silent SNP C C G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SLC7A14 57709 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 170198277 170198277 + Silent SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ST7L 54879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 113098583 113098583 + Missense_Mutation SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c STAB2 55576 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 104071251 104071251 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SUPT7L 9913 broad.mit.edu;hgsc.bcm.edu 37 2 27876614 27876614 + Missense_Mutation SNP C C G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SYNC 81493 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 33149611 33149611 + Missense_Mutation SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c TRIM33 51592 hgsc.bcm.edu;ucsc.edu 37 1 114948266 114948267 + Frame_Shift_Ins INS - - T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c TRIP11 9321 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 92499570 92499570 + Missense_Mutation SNP T T G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c TTC24 164118 broad.mit.edu;hgsc.bcm.edu 37 1 156553240 156553240 + Nonsense_Mutation SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179416718 179416718 + Missense_Mutation SNP G G T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c USP33 23032 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 78195568 78195568 + Missense_Mutation SNP T T C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10188245 10188245 + Missense_Mutation SNP G G T rs104893830 bycluster;alternate_allele TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c VPS37A 137492 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 17125809 17125809 + Missense_Mutation SNP T T G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c WBSCR17 64409 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 71177037 71177037 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c WBSCR17 64409 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 71177038 71177038 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c WWC3 55841 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 10085338 10085338 + Silent SNP C C T rs148094144 TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c XDH 7498 broad.mit.edu;ucsc.edu 37 2 31598321 31598321 + Silent SNP G A A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c YLPM1 56252 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 75248501 75248501 + Silent SNP A A T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ZNF107 51427 broad.mit.edu;hgsc.bcm.edu 37 7 64167976 64167976 + Frame_Shift_Del DEL A A - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ZNF354B 117608 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 178293302 178293302 + Silent SNP C C T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ZNF419 79744 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 58005254 58005254 + Missense_Mutation SNP G G A novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c ACIN1 22985 broad.mit.edu 37 14 23549554 23549554 + Silent SNP G T T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c BAP1 8314 broad.mit.edu 37 3 52443747 52443747 + Missense_Mutation SNP A G G novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c EP400 57634 broad.mit.edu 37 12 132547093 132547093 + Silent SNP A G G rs28513925 TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c IFT140 9742 broad.mit.edu 37 16 1570643 1570643 + Missense_Mutation SNP A T T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LOC284232 0 broad.mit.edu 37 13 19409453 19409453 + RNA SNP T C C rs138555198 by1000genomes TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LOC442421 0 broad.mit.edu 37 9 66500808 66500808 + RNA SNP T G G rs62562158 TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c LOC647121 0 broad.mit.edu 37 1 121298440 121298440 + RNA SNP T C C novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c NLRP7 199713 broad.mit.edu 37 19 55451068 55451068 + Silent SNP C T T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c RARS 5917 broad.mit.edu 37 5 167927655 167927655 + Silent SNP A T T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c SPTB 6710 broad.mit.edu 37 14 65241143 65241143 + Missense_Mutation SNP C T T novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c Unknown 0 broad.mit.edu 37 16 18441114 18441116 + Splice_Site DEL CAC - - rs3051977 alternate_allele TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 CAC CAC . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c Unknown 0 broad.mit.edu 37 2 89495754 89495754 + RNA DEL A - - novel TCGA-CW-5580-01A-01D-1669-08 TCGA-CW-5580-11A-02D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6e4ed3ae-aa80-453a-95be-0af96a7bc4e3 54af26e6-d457-44ae-b574-4e74df45fd7c