Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADCY10 55811 hgsc.bcm.edu;ucsc.edu 37 1 167829063 167829063 + Frame_Shift_Del DEL A A - novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 AIM1L 55057 hgsc.bcm.edu;ucsc.edu 37 1 26650663 26650663 + Missense_Mutation SNP C C T rs189284478 by1000genomes TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 ANK3 288 hgsc.bcm.edu;ucsc.edu 37 10 61835851 61835851 + Silent SNP A A T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 ATP7A 538 hgsc.bcm.edu 37 X 77254041 77254041 + Missense_Mutation SNP A A T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 CDKN2A 1029 hgsc.bcm.edu 37 9 21970916 21970916 + Missense_Mutation SNP C C T rs3731249 bycluster;byfrequency;by1000genomes TCGA-CZ-5455-01A-01W-1528-10 TCGA-CZ-5455-11A-01W-1528-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq 18d638e2-3061-4ea5-8ad5-93559d1eabb0 cd5529f7-7518-4681-8443-92e6d3d8ad6f CHCHD3 54927 hgsc.bcm.edu 37 7 132470404 132470404 + Silent SNP T T A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 CORO1B 57175 hgsc.bcm.edu;ucsc.edu 37 11 67207622 67207622 + Missense_Mutation SNP C C T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 CR2 1380 hgsc.bcm.edu;ucsc.edu 37 1 207651381 207651381 + Missense_Mutation SNP C C A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 ERMN 57471 hgsc.bcm.edu;ucsc.edu 37 2 158178112 158178112 + Missense_Mutation SNP C C T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 FAT3 120114 hgsc.bcm.edu 37 11 92531420 92531421 + Frame_Shift_Ins INS - - G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 FBN1 2200 hgsc.bcm.edu;ucsc.edu 37 15 48725074 48725074 + Missense_Mutation SNP C C T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 FTLP10 100130017 hgsc.bcm.edu;ucsc.edu 37 4 69056948 69056948 + RNA SNP G G C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 HOOK3 84376 hgsc.bcm.edu;ucsc.edu 37 8 42841800 42841800 + Missense_Mutation SNP A A G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 ITGB4 3691 hgsc.bcm.edu;ucsc.edu 37 17 73752790 73752790 + Missense_Mutation SNP G G A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 LIPG 9388 hgsc.bcm.edu;ucsc.edu 37 18 47095827 47095827 + Silent SNP C C T rs146146617 TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 MAML2 84441 hgsc.bcm.edu 37 11 95825401 95825401 + Silent SNP C C T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 MYBPHL 343263 hgsc.bcm.edu;ucsc.edu 37 1 109838957 109838957 + Missense_Mutation SNP C C G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 MYLK4 340156 hgsc.bcm.edu;ucsc.edu 37 6 2689126 2689126 + Silent SNP G G T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 ODZ3 0 hgsc.bcm.edu;ucsc.edu 37 4 183714250 183714250 + Missense_Mutation SNP A A T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 OR5A2 219981 hgsc.bcm.edu;ucsc.edu 37 11 59190140 59190140 + Missense_Mutation SNP A A G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52637555 52637555 + Nonsense_Mutation SNP G G A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PCDHGB2 56103 hgsc.bcm.edu;ucsc.edu 37 5 140741742 140741742 + Silent SNP G G A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PDCD2 5134 hgsc.bcm.edu;ucsc.edu 37 6 170892196 170892196 + Missense_Mutation SNP T T C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PEBP4 157310 hgsc.bcm.edu;ucsc.edu 37 8 22777758 22777758 + Missense_Mutation SNP T T C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PION 54103 hgsc.bcm.edu;ucsc.edu 37 7 76959608 76959608 + Missense_Mutation SNP T T G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PON3 5446 hgsc.bcm.edu;ucsc.edu 37 7 94991745 94991745 + Missense_Mutation SNP T T C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 PTRF 284119 hgsc.bcm.edu;ucsc.edu 37 17 40556892 40556892 + Missense_Mutation SNP C C A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 SLC22A4 6583 hgsc.bcm.edu;ucsc.edu 37 5 131662990 131662990 + Missense_Mutation SNP G G C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 SYNE2 23224 hgsc.bcm.edu;ucsc.edu 37 14 64556348 64556348 + Missense_Mutation SNP C C G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 TBCK 93627 hgsc.bcm.edu 37 4 107168369 107168370 + Frame_Shift_Ins INS - - G novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 TRIM37 4591 hgsc.bcm.edu;ucsc.edu 37 17 57078981 57078981 + Silent SNP G G A novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 UBE2D1 7321 hgsc.bcm.edu;ucsc.edu 37 10 60128517 60128517 + Missense_Mutation SNP G G C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 VHL 7428 hgsc.bcm.edu 37 3 10183725 10183725 + Nonsense_Mutation SNP C C A rs5030826 TCGA-CZ-5455-01A-01W-1528-10 TCGA-CZ-5455-11A-01W-1528-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq 18d638e2-3061-4ea5-8ad5-93559d1eabb0 cd5529f7-7518-4681-8443-92e6d3d8ad6f VSIG10 54621 hgsc.bcm.edu;ucsc.edu 37 12 118506261 118506261 + Silent SNP C C T novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84 XPO5 57510 hgsc.bcm.edu;ucsc.edu 37 6 43492326 43492326 + Silent SNP T T C novel TCGA-CZ-5455-01A-01D-1501-10 TCGA-CZ-5455-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7066c3fa-4e8c-460c-ba68-a3508fdeb315 d3da7fdd-73e5-49ee-95fc-4d5ae03f0e84