Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA1 19 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 107573110 107573110 + Missense_Mutation SNP C C A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 AGA 175 broad.mit.edu;ucsc.edu 37 4 178357480 178357480 + Silent SNP T A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 AHR 196 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 17379447 17379448 + Frame_Shift_Ins INS - - C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ANKRD1 27063 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 92679944 92679944 + Missense_Mutation SNP C C A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ARID2 196528 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 46245726 46245726 + Frame_Shift_Del DEL G G - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 B3GNT8 374907 broad.mit.edu;ucsc.edu 37 19 41932579 41932579 + Silent SNP G A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 BRWD1 54014 broad.mit.edu;ucsc.edu 37 21 40568695 40568695 + Silent SNP T C C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 C21orf34 0 hgsc.bcm.edu;ucsc.edu 37 21 17763931 17763931 + RNA SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 CASR 846 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 122002936 122002936 + Missense_Mutation SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 CLPB 81570 broad.mit.edu;ucsc.edu 37 11 72012970 72012970 + Silent SNP G A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 CWC27 10283 broad.mit.edu;ucsc.edu 37 5 64082386 64082386 + Silent SNP G A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 DHX9 1660 hgsc.bcm.edu;ucsc.edu 37 1 182825719 182825719 + RNA SNP T T C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 DNAH14 127602 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 225266907 225266907 + Splice_Site SNP A A T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 DPCR1 135656 hgsc.bcm.edu;ucsc.edu 37 6 30918543 30918545 + In_Frame_Del DEL TTG TTG - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 TTG TTG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 DUOX1 53905 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 45434244 45434244 + Missense_Mutation SNP G G A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 FAM160A1 729830 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 152577469 152577469 + Silent SNP T T C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 FRMPD1 22844 broad.mit.edu;ucsc.edu 37 9 37744613 37744613 + Missense_Mutation SNP A T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 G3BP1 10146 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 151179550 151179550 + Missense_Mutation SNP G G A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 GDPD1 284161 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 57334552 57334552 + Missense_Mutation SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 GJA10 84694 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 90604723 90604723 + Missense_Mutation SNP A A G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 GOLGA4 2803 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 37343778 37343778 + Missense_Mutation SNP C C A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 GPAM 57678 broad.mit.edu;ucsc.edu 37 10 113932775 113932775 + Missense_Mutation SNP T C C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 IL18RAP 8807 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 103068553 103068553 + Missense_Mutation SNP A A G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 INPP4B 8821 hgsc.bcm.edu;ucsc.edu 37 4 143067033 143067034 + Frame_Shift_Ins INS - - T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 MAGEA5 4104 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 151283746 151283746 + Missense_Mutation SNP G G T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 MUC17 140453 hgsc.bcm.edu;ucsc.edu 37 7 100678377 100678378 + Frame_Shift_Ins INS - - C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 MUC17 140453 hgsc.bcm.edu;ucsc.edu 37 7 100678380 100678380 + Frame_Shift_Del DEL A A - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 MUC4 4585 hgsc.bcm.edu 37 3 195508415 195508462 + In_Frame_Del DEL GCACAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAT GCACAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAT - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 GCACAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAT GCACAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 NUDT7 283927 broad.mit.edu;ucsc.edu 37 16 77775489 77775489 + Missense_Mutation SNP T G G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 OSGEP 55644 broad.mit.edu;ucsc.edu 37 14 20916148 20916148 + Silent SNP A G G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52584765 52584766 + Frame_Shift_Ins INS - - TT novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 - - - TT - - Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PKN2 5586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 89236126 89236126 + Missense_Mutation SNP A A T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PLG 5340 hgsc.bcm.edu;ucsc.edu 37 6 161155095 161155095 + Silent SNP C C T rs113153850 TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PRUNE2 158471 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 79438564 79438564 + Missense_Mutation SNP A A G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PRUNE2 158471 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 79438565 79438565 + Missense_Mutation SNP C C G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PTPRR 5801 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 71033004 71033004 + Missense_Mutation SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PYGO1 26108 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 55838992 55838992 + Silent SNP A A G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SERPINA10 51156 broad.mit.edu;ucsc.edu 37 14 94756558 94756560 + In_Frame_Del DEL TGA - - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 TGA TGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SERPINA1 5265 broad.mit.edu;ucsc.edu 37 14 94844824 94844824 + Missense_Mutation SNP G C C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SFMBT2 57713 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 7217995 7217995 + Missense_Mutation SNP T T A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SFMBT2 57713 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 7217996 7217996 + Missense_Mutation SNP T T G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SLC16A4 9122 hgsc.bcm.edu;ucsc.edu 37 1 110921820 110921820 + Missense_Mutation SNP A A T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SPDYE4 388333 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 8658873 8658873 + Silent SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 TAS2R50 259296 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 11138584 11138584 + Silent SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 TAX1BP1 8887 hgsc.bcm.edu 37 7 27856058 27856059 + Frame_Shift_Ins INS - - A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10191593 10191593 + Nonsense_Mutation SNP A A T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 WNK2 65268 broad.mit.edu;ucsc.edu 37 9 95997112 95997112 + Silent SNP C T T rs113308587 bycluster;byfrequency;by1000genomes TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 WSB2 55884 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 118481141 118481141 + Missense_Mutation SNP T T A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 WSB2 55884 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 118481144 118481144 + Missense_Mutation SNP T T A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ZBTB8B 728116 broad.mit.edu;ucsc.edu 37 1 32950945 32950945 + Missense_Mutation SNP G T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ZMPSTE24 10269 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 40726535 40726535 + Missense_Mutation SNP C C T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ZNF100 163227 broad.mit.edu;hgsc.bcm.edu 37 19 21909967 21909967 + Frame_Shift_Del DEL A A - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ZNF287 57336 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 16456102 16456102 + Missense_Mutation SNP A A T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ACSM2A 123876 broad.mit.edu 37 16 20486684 20486684 + Missense_Mutation SNP A G G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ARHGDIG 398 broad.mit.edu 37 16 332799 332799 + Frame_Shift_Del DEL G - - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 C6orf62 81688 broad.mit.edu 37 6 24719011 24719011 + 5'UTR SNP G T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G G T G G Unknown Valid Somatic Phase_I WXS PGM Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 CACNA1C 775 broad.mit.edu 37 12 2595320 2595320 + Missense_Mutation SNP C T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 FGG 2266 broad.mit.edu 37 4 155527857 155527857 + Missense_Mutation SNP C T T rs192482410 by1000genomes;alternate_allele TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 IFNA1 3439 broad.mit.edu 37 9 21440985 21440985 + Missense_Mutation SNP G A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 LRFN1 57622 broad.mit.edu 37 19 39805558 39805558 + Missense_Mutation SNP C T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 MID1IP1 58526 broad.mit.edu 37 X 38664279 38664279 + Missense_Mutation SNP A G G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 MUC4 4585 broad.mit.edu 37 3 195511888 195511888 + Missense_Mutation SNP C G G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 NPAS1 4861 broad.mit.edu 37 19 47539293 47539293 + Frame_Shift_Del DEL G - - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 NUTF2 10204 broad.mit.edu 37 16 67899046 67899046 + Missense_Mutation SNP C A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 OR2W5 441932 broad.mit.edu 37 1 247655361 247655361 + Missense_Mutation SNP G A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 OR4N2 390429 broad.mit.edu 37 14 20296164 20296164 + Missense_Mutation SNP A G G novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 PDPR 55066 broad.mit.edu 37 16 70180077 70180077 + Silent SNP T C C novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SLC30A6 55676 broad.mit.edu 37 2 32422862 32422862 + Missense_Mutation SNP C T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 SPTBN2 6712 broad.mit.edu 37 11 66463961 66463961 + Silent SNP C A A novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 Unknown 0 broad.mit.edu 37 7 143218162 143218163 + RNA INS - T T novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0 ZNF831 128611 broad.mit.edu 37 20 57766859 57766860 + Frame_Shift_Del DEL GG - - novel TCGA-CZ-5460-01A-01D-1501-10 TCGA-CZ-5460-11A-01D-1501-10 GG GG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a6de1551-2a1a-4a43-ba7f-caa436f5f6dd ce595188-1b2d-46f1-b1d0-a44d2294d9a0