Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA13 154664 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 48353926 48353926 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ABI2 10152 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 204267389 204267389 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ACCN5 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 156757933 156757933 + Missense_Mutation SNP T T G rs142739848 alternate_allele TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 AHDC1 27245 broad.mit.edu;ucsc.edu 37 1 27874531 27874531 + Missense_Mutation SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 AKAP13 11214 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 86123604 86123604 + Missense_Mutation SNP A A G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ANKHD1 54882 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 139876554 139876554 + Missense_Mutation SNP G G T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 APOA5 116519 hgsc.bcm.edu;ucsc.edu 37 11 116660943 116660944 + Frame_Shift_Ins INS - - C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 BAGE2 85319 broad.mit.edu 37 21 11026722 11026722 + Splice_Site SNP C A A rs2698612 TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 BCL6 604 broad.mit.edu 37 3 187446247 187446247 + Nonsense_Mutation SNP G A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 C12orf70 341346 broad.mit.edu;ucsc.edu 37 12 27628533 27628533 + Silent SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 C14orf106 0 hgsc.bcm.edu 37 14 45693722 45693722 + Frame_Shift_Del DEL T T - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 C1orf129 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 170985418 170985418 + Missense_Mutation SNP A A C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 C1orf94 84970 broad.mit.edu;ucsc.edu 37 1 34684328 34684328 + Missense_Mutation SNP A G G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 C3orf34 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 196434643 196434643 + Nonsense_Mutation SNP C C A rs139813132 by1000genomes;alternate_allele TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CASR 846 broad.mit.edu;hgsc.bcm.edu 37 3 122003164 122003164 + Missense_Mutation SNP T T A rs104893701 bycluster;alternate_allele TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CDC25C 995 broad.mit.edu 37 5 137621505 137621505 + Missense_Mutation SNP C A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CLEC2L 154790 broad.mit.edu;ucsc.edu 37 7 139221070 139221070 + Missense_Mutation SNP A C C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 COL4A1 1282 broad.mit.edu 37 13 110833684 110833684 + Silent SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CPLX1 10815 broad.mit.edu 37 4 780370 780370 + Silent SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CRISP1 167 broad.mit.edu;ucsc.edu 37 6 49819726 49819726 + Missense_Mutation SNP G T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CSF3R 1441 broad.mit.edu;ucsc.edu 37 1 36939104 36939104 + Missense_Mutation SNP C G G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 CUL1 8454 hgsc.bcm.edu;ucsc.edu 37 7 148486899 148486899 + Frame_Shift_Del DEL C C - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 DOCK7 85440 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 62979390 62979390 + Silent SNP A A G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 DSEL 92126 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 65181609 65181609 + Silent SNP A A T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ECT2L 345930 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 139206666 139206666 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 EEF1A1 1915 broad.mit.edu;hgsc.bcm.edu 37 6 74227570 74227570 + Missense_Mutation SNP A A T rs11556678 alternate_allele TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 FAM187B 148109 broad.mit.edu 37 19 35716084 35716084 + Frame_Shift_Del DEL G - - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 FAM92A3 0 broad.mit.edu 37 4 183960484 183960484 + RNA DEL A - - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 FANCA 2175 broad.mit.edu;ucsc.edu 37 16 89836339 89836339 + Missense_Mutation SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 GJA9 81025 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 39340771 39340771 + Missense_Mutation SNP A A C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 GOLM1 51280 broad.mit.edu;ucsc.edu 37 9 88648293 88648293 + Silent SNP G A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 GPR64 10149 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 19026097 19026097 + Splice_Site SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 GPSM1 26086 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 139228923 139228923 + Missense_Mutation SNP G G C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 GRIN2B 2904 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 13906469 13906469 + Silent SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 GRIN2B 2904 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 13906470 13906470 + Missense_Mutation SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 HEATR7B2 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 41045851 41045851 + Silent SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 HECW1 23072 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 43548639 43548639 + Missense_Mutation SNP G G T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 HEXIM1 10614 broad.mit.edu 37 17 43226612 43226612 + Missense_Mutation SNP A C C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 INSRR 3645 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 156814334 156814334 + Missense_Mutation SNP T T C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 JAG2 3714 broad.mit.edu 37 14 105624079 105624079 + Nonsense_Mutation SNP C A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 KIAA1432 57589 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 5763718 5763718 + Silent SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 LAMP3 27074 broad.mit.edu;ucsc.edu 37 3 182871951 182871951 + Missense_Mutation SNP T C C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 LOC494141 494141 broad.mit.edu 37 11 18231485 18231485 + RNA SNP G A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 LOC646214 646214 broad.mit.edu 37 15 21934828 21934828 + RNA DEL G - - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 MANSC1 54682 hgsc.bcm.edu;ucsc.edu 37 12 12491487 12491487 + Frame_Shift_Del DEL T T - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 MICAL3 57553 broad.mit.edu;ucsc.edu 37 22 18382309 18382309 + Missense_Mutation SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 MIR192 406967 broad.mit.edu 37 11 64658636 64658636 + RNA SNP A G G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 MKRN1 23608 broad.mit.edu;hgsc.bcm.edu 37 7 140155662 140155662 + Missense_Mutation SNP A A G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 MUC4 4585 hgsc.bcm.edu 37 3 195513158 195513158 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 MYH13 8735 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 10261145 10261145 + Splice_Site SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 OR5D18 219438 hgsc.bcm.edu;ucsc.edu 37 11 55587894 55587896 + In_Frame_Del DEL CAA CAA - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 CAA CAA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 OR7C1 26664 hgsc.bcm.edu 37 19 14910638 14910638 + Frame_Shift_Del DEL A A - novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ORC3 23595 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 88367719 88367719 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PADI6 353238 broad.mit.edu;ucsc.edu 37 1 17720899 17720899 + Missense_Mutation SNP G A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PARP14 54625 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 122418640 122418640 + Silent SNP A A T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52643561 52643561 + Nonsense_Mutation SNP G G A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PCLO 27445 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 82545945 82545945 + Missense_Mutation SNP T T G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PCNA 5111 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 5099285 5099285 + Missense_Mutation SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PDE5A 8654 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 120442144 120442144 + Silent SNP A A G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PGBD5 79605 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 230461073 230461073 + Silent SNP G G A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PRNT 149830 broad.mit.edu 37 20 4721284 4721284 + RNA SNP C A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PSG11 5680 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 43519423 43519423 + Missense_Mutation SNP T T C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PSMB5 5693 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23504076 23504076 + Missense_Mutation SNP G G T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 PTCHD3 374308 broad.mit.edu 37 10 27702296 27702296 + Missense_Mutation SNP A G G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 RAET1E 135250 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 150210680 150210680 + Silent SNP G G A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 RANBP3L 202151 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 36255599 36255599 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ROS1 6098 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 117674152 117674152 + Splice_Site SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 RSL1D1 26156 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 11935566 11935566 + Missense_Mutation SNP T T G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 SLC33A1 9197 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 155571204 155571204 + Missense_Mutation SNP T T A rs148999356 alternate_allele TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 SLC6A12 6539 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 300301 300301 + Missense_Mutation SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 SLC6A13 6540 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 336752 336752 + Missense_Mutation SNP T T C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 SNTG2 54221 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 1094047 1094047 + Silent SNP T T G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 TG 7038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 133911118 133911118 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 TRAM1 23471 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 71508498 71508498 + Missense_Mutation SNP G G A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 TRIO 7204 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 14497119 14497119 + Missense_Mutation SNP C C A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 TUBB4 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 6496076 6496076 + Missense_Mutation SNP G G T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 UBC 7316 broad.mit.edu;hgsc.bcm.edu 37 12 125397153 125397153 + Missense_Mutation SNP T T C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 UBE2J2 118424 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 1198752 1198752 + Missense_Mutation SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 UBE4B 10277 broad.mit.edu;ucsc.edu 37 1 10221342 10221342 + Missense_Mutation SNP C T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 Unknown 0 broad.mit.edu 37 16 70268080 70268080 + RNA SNP T C C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 Unknown 0 broad.mit.edu 37 16 70268081 70268081 + RNA SNP G A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 Unknown 0 broad.mit.edu 37 17 21731002 21731002 + Missense_Mutation SNP G A A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 Unknown 0 broad.mit.edu 37 9 68414462 68414462 + RNA SNP A G G rs149255248 TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 VSNL1 7447 broad.mit.edu;ucsc.edu 37 2 17773470 17773470 + Silent SNP A G G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZC3H18 124245 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 88690383 88690383 + Missense_Mutation SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZC3H7A 29066 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 11845212 11845212 + Missense_Mutation SNP G G C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZDHHC6 64429 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 114201991 114201991 + Missense_Mutation SNP A A G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZFP112 7771 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 44833539 44833539 + Nonsense_Mutation SNP A A T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZMYM1 79830 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 35578915 35578915 + Missense_Mutation SNP T T A novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZNF570 148268 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 37975663 37975663 + Missense_Mutation SNP A A G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZNF684 127396 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 41012841 41012841 + Silent SNP T T C novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZNF804B 219578 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 88965798 88965798 + Missense_Mutation SNP C C T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 ZSCAN20 7579 broad.mit.edu;ucsc.edu 37 1 33960693 33960693 + Missense_Mutation SNP A G G novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667 HMCN1 83872 broad.mit.edu 37 1 185964002 185964002 + Missense_Mutation SNP A T T novel TCGA-A3-3387-01A-01D-1534-10 TCGA-A3-3387-11A-01D-1534-10 A A A T A A Unknown Valid Somatic Phase_I WXS PGM . . Illumina GAIIx e9e149ff-79e0-48f9-9262-1fbbad865e77 e6bb2386-fa1d-4b73-b853-ce904e1fd667