Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AAGAB 79719 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 67524205 67524205 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ACACA 31 broad.mit.edu;ucsc.edu 37 17 35487038 35487038 + Missense_Mutation SNP A G G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ARHGEF2 9181 broad.mit.edu 37 1 155932492 155932492 + Silent SNP C G G rs75834511 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ATP8B3 148229 broad.mit.edu 37 19 1792020 1792020 + Missense_Mutation SNP G A A rs185225335 by1000genomes TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 B3GNT6 192134 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 76750646 76750646 + Silent SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 BAZ2B 29994 broad.mit.edu;ucsc.edu 37 2 160206389 160206389 + Missense_Mutation SNP G C C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 C10orf76 79591 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 103789421 103789421 + Missense_Mutation SNP A A G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 C21orf59 56683 hgsc.bcm.edu;ucsc.edu 37 21 33979947 33979947 + RNA SNP A A G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 C2orf89 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 85066361 85066361 + Silent SNP G G T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 C4BPA 722 broad.mit.edu;ucsc.edu 37 1 207304992 207304992 + Missense_Mutation SNP C T T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CCDC149 91050 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 24810062 24810062 + Silent SNP G G A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CCDC18 343099 hgsc.bcm.edu;ucsc.edu 37 1 93657661 93657661 + Missense_Mutation SNP G G C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CD3E 916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 118185183 118185183 + Missense_Mutation SNP C C A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CD3E 916 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 118185184 118185184 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CDC20B 166979 broad.mit.edu;hgsc.bcm.edu 37 5 54415634 54415634 + Missense_Mutation SNP A A C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CDC73 79577 broad.mit.edu;ucsc.edu 37 1 193181526 193181526 + Missense_Mutation SNP G A A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CDH7 1005 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 63530053 63530053 + Silent SNP C C T rs138789170 bycluster;byfrequency;by1000genomes TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 CHD6 84181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 40126106 40126106 + Missense_Mutation SNP T T C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 DGKK 139189 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 50147057 50147057 + Silent SNP G G T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 DHX37 57647 broad.mit.edu 37 12 125473494 125473494 + Frame_Shift_Del DEL G - - novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ENTPD2 954 broad.mit.edu 37 9 139944970 139944970 + Frame_Shift_Del DEL G - - novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 EXOSC10 5394 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 11128077 11128077 + Missense_Mutation SNP C C G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 FAM174B 400451 broad.mit.edu 37 15 93198679 93198684 + In_Frame_Del DEL TGGAGC - - rs68056278 bycluster;by1000genomes TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 TGGAGC TGGAGC . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 FAM54B 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 26153147 26153147 + Missense_Mutation SNP C C A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 FBXO39 162517 broad.mit.edu;ucsc.edu 37 17 6684202 6684202 + Missense_Mutation SNP A C C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 FGD5 152273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 14862883 14862883 + Missense_Mutation SNP G G A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 FIG4 9896 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 110053850 110053850 + Missense_Mutation SNP A A G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 GABRA1 2554 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 161277823 161277823 + Nonsense_Mutation SNP A A T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 GSTA2 2939 broad.mit.edu;hgsc.bcm.edu 37 6 52622679 52622679 + Silent SNP G G A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 GTF2IRD1 9569 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 73973274 73973274 + Missense_Mutation SNP C C A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 GTPBP2 54676 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 43592732 43592732 + Missense_Mutation SNP A A T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 HGC6.3 100128124 hgsc.bcm.edu 37 6 168376925 168376926 + Frame_Shift_Ins INS - - T rs35001101 bycluster;by1000genomes TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 IL17RC 84818 hgsc.bcm.edu;ucsc.edu 37 3 9965582 9965582 + Missense_Mutation SNP G G A rs75692599 bycluster;byfrequency;by1000genomes TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 IQGAP2 10788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 75932958 75932958 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 JUN 3725 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 59247909 59247909 + Silent SNP G G C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 KEAP1 9817 broad.mit.edu;ucsc.edu 37 19 10599946 10599946 + Missense_Mutation SNP A G G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 KIAA0368 23392 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 114184459 114184459 + Silent SNP A A T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 KRIT1 889 broad.mit.edu;ucsc.edu 37 7 91855963 91855963 + Silent SNP T C C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 KRT79 338785 broad.mit.edu;ucsc.edu 37 12 53216799 53216799 + Splice_Site SNP C T T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 LGI2 55203 broad.mit.edu;ucsc.edu 37 4 25032128 25032128 + Missense_Mutation SNP A G G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MAP3K5 4217 broad.mit.edu;ucsc.edu 37 6 136932484 136932484 + Missense_Mutation SNP C A A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MAP4K5 11183 hgsc.bcm.edu;ucsc.edu 37 14 50904202 50904202 + Frame_Shift_Del DEL C C - novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MCAM 4162 broad.mit.edu 37 11 119187759 119187761 + In_Frame_Del DEL CAG - - novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 CAG CAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MED10 84246 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 6372701 6372701 + Missense_Mutation SNP A A T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MFSD1 64747 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 158545109 158545109 + Silent SNP A A T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MGAM 8972 broad.mit.edu 37 7 141762388 141762388 + Silent SNP C T T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 MICALL2 79778 broad.mit.edu;ucsc.edu 37 7 1478560 1478560 + Missense_Mutation SNP G A A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 NDRG1 10397 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 134270635 134270635 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 NRXN2 9379 broad.mit.edu;ucsc.edu 37 11 64427892 64427892 + Silent SNP T G G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 OR10J5 127385 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 159505240 159505240 + Silent SNP A A C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 P2RX4 5025 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 121655012 121655012 + Silent SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PABPN1L 390748 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 88931430 88931430 + Missense_Mutation SNP C C A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PAX8 7849 broad.mit.edu 37 2 113999705 113999705 + Missense_Mutation SNP G A A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52668807 52668807 + Nonsense_Mutation SNP G G C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PGPEP1L 145814 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 99511748 99511748 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PI4KAP1 728233 broad.mit.edu 37 22 20386644 20386644 + RNA SNP G A A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PKD2L2 27039 broad.mit.edu;hgsc.bcm.edu 37 5 137257415 137257415 + Silent SNP T T G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 POTEF 728378 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 130832626 130832626 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PRKACA 5566 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 14204026 14204026 + Missense_Mutation SNP C C G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 PSMB11 122706 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23511574 23511574 + Missense_Mutation SNP C C A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 RBBP5 5929 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 205084987 205084987 + Missense_Mutation SNP T T C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 RBCK1 10616 hgsc.bcm.edu 37 20 411016 411017 + Frame_Shift_Ins INS - - C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 RHBDD2 57414 broad.mit.edu;ucsc.edu 37 7 75517559 75517559 + Silent SNP C T T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ROS1 6098 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 117665413 117665413 + Missense_Mutation SNP A A T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SCARF2 91179 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 20783904 20783904 + Missense_Mutation SNP G G A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SLC19A3 80704 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 228563604 228563604 + Missense_Mutation SNP T T G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SLC26A5 375611 hgsc.bcm.edu;ucsc.edu 37 7 103018052 103018052 + Silent SNP C C A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SLC35F3 148641 broad.mit.edu;ucsc.edu 37 1 234458836 234458836 + Silent SNP C T T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SLC9A11 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 173526501 173526501 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SLC9A3 6550 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 482713 482713 + Silent SNP G G A rs150200197 TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SPRED1 161742 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 38643311 38643311 + Missense_Mutation SNP T T C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T T C T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SRSF1 6426 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 56084396 56084396 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 SRSF2IP 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 46355548 46355548 + Missense_Mutation SNP C C T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 TAAR2 9287 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 132938953 132938953 + Missense_Mutation SNP A A G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 TMEM117 84216 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 44537365 44537365 + Missense_Mutation SNP G G A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 TMEM59 9528 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 54506474 54506474 + Missense_Mutation SNP A A C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 UGT2A3 79799 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 69817431 69817431 + Silent SNP G G A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 Unknown 0 broad.mit.edu 37 19 28927578 28927579 + RNA INS - A A novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 WDR81 124997 broad.mit.edu;hgsc.bcm.edu 37 17 1633695 1633695 + Missense_Mutation SNP G G T novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ZNF629 23361 hgsc.bcm.edu;ucsc.edu 37 16 30794783 30794783 + Missense_Mutation SNP G G C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ZNF740 283337 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 53579212 53579212 + Missense_Mutation SNP T T G novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617 ZNF846 162993 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 9868360 9868360 + Missense_Mutation SNP G G C novel TCGA-B0-4815-01A-01D-1501-10 TCGA-B0-4815-11A-02D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq fe091054-41d3-44fa-86a2-fad3ae58423f 6a44057f-671c-497d-b694-512161943617