Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AADACL3 126767 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 12785830 12785830 + Missense_Mutation SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ACSL6 23305 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 131296216 131296216 + Missense_Mutation SNP A A T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ARHGEF15 22899 hgsc.bcm.edu;ucsc.edu 37 17 8216256 8216256 + Frame_Shift_Del DEL C C - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ATP6V0A1 535 broad.mit.edu 37 17 40647651 40647651 + Missense_Mutation SNP A T T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CDYL 9425 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 4735076 4735076 + RNA SNP C C G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CLIP1 6249 broad.mit.edu 37 12 122812709 122812709 + Missense_Mutation SNP C T T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CLTCL1 8218 broad.mit.edu;hgsc.bcm.edu 37 22 19210260 19210260 + Missense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CNTN5 53942 broad.mit.edu;hgsc.bcm.edu 37 11 100226891 100226891 + Silent SNP C C G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CPA6 57094 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 68396051 68396051 + Missense_Mutation SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CTDP1 9150 broad.mit.edu;hgsc.bcm.edu 37 18 77475251 77475251 + Silent SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb CYB5RL 606495 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 54644949 54644949 + Missense_Mutation SNP T T G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb DAZAP1 26528 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 1433802 1433802 + Silent SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb DNAI1 27019 broad.mit.edu;hgsc.bcm.edu 37 9 34490013 34490013 + Missense_Mutation SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ELF1 1997 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 41507956 41507956 + Nonsense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb EP400 57634 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 132511994 132511994 + Missense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb EYS 346007 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 66063414 66063414 + Missense_Mutation SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb FAM125A 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 17533164 17533164 + Missense_Mutation SNP C C T rs146357246 alternate_allele TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb FTSJD1 55783 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71318530 71318530 + Missense_Mutation SNP T T C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb GNAI2 2771 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 50294255 50294255 + Missense_Mutation SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb GTF2IRD2P1 401375 broad.mit.edu 37 7 72664019 72664020 + Translation_Start_Site INS - A A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb HSD17B7P2 158160 broad.mit.edu 37 10 38654432 38654432 + Missense_Mutation SNP A G G rs2257765 bysubmitter TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb HSPA14 51182 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 14890648 14890648 + Missense_Mutation SNP A A C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb IL1RAP 3556 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 190321925 190321925 + Missense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ITFG1 81533 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 47493063 47493063 + Missense_Mutation SNP C C A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb KDM5C 8242 broad.mit.edu;hgsc.bcm.edu 37 X 53224222 53224222 + Nonsense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb KIAA0649 0 broad.mit.edu;hgsc.bcm.edu 37 9 138379621 138379621 + Missense_Mutation SNP T T G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb KIAA1370 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 52892355 52892355 + Missense_Mutation SNP A A G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb KIF1B 23095 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 10434522 10434522 + Missense_Mutation SNP A A C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb L2HGDH 79944 broad.mit.edu 37 14 50736035 50736035 + Missense_Mutation SNP C G G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb LOC728024 728024 broad.mit.edu 37 8 37604944 37604944 + Silent SNP G A A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb LOC728323 728323 broad.mit.edu 37 2 243056808 243056808 + RNA SNP T A A rs62192205 TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb LOC728323 728323 broad.mit.edu 37 2 243056818 243056818 + RNA SNP C T T rs62192206 TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb LRIG2 9860 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 113635893 113635893 + Missense_Mutation SNP T T A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb LTBP4 8425 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 41120306 41120306 + Silent SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb MAPK12 6300 broad.mit.edu;hgsc.bcm.edu 37 22 50695076 50695076 + Splice_Site SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb MUC6 4588 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 1029578 1029578 + Silent SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NALCN 259232 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 101720287 101720287 + Missense_Mutation SNP C C A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NAV3 89795 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 78553024 78553024 + Missense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NEO1 4756 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 73585755 73585755 + Missense_Mutation SNP A A G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NFE2L1 4779 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 46134732 46134732 + Silent SNP A A T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NPHP4 261734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 5934954 5934954 + Missense_Mutation SNP C C A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NUP37 79023 hgsc.bcm.edu;ucsc.edu 37 12 102506003 102506011 + In_Frame_Del DEL TCTTCTTCC TCTTCTTCC - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 TCTTCTTCC TCTTCTTCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb NXPH4 11247 hgsc.bcm.edu 37 12 57619187 57619188 + In_Frame_Ins INS - - GGC novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb OR10H4 126541 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 16059970 16059970 + Nonsense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb OR13C5 138799 hgsc.bcm.edu 37 9 107361451 107361452 + Frame_Shift_Del DEL GC GC - rs35762823 byfrequency TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 GC GC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52610584 52610584 + Frame_Shift_Del DEL C C - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PCDH10 57575 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 134071550 134071550 + Nonsense_Mutation SNP C C A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PDZD3 79849 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 119059108 119059108 + Missense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PIP5K1C 23396 broad.mit.edu 37 19 3651997 3651997 + Missense_Mutation SNP G T T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PIWIL2 55124 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 22138976 22138976 + Missense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PPIL4 85313 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 149833352 149833352 + Missense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G G C G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PRKACB 5567 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 84670172 84670172 + Missense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PRPH2 5961 broad.mit.edu;ucsc.edu 37 6 42666085 42666085 + Missense_Mutation SNP T C C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PRRT1 80863 broad.mit.edu;hgsc.bcm.edu 37 6 32117130 32117130 + Missense_Mutation SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PTPRC 5788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 198678874 198678874 + Missense_Mutation SNP G G C rs139425744 alternate_allele TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb PTPRC 5788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 198678876 198678876 + Missense_Mutation SNP A A T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb RIMBP2 23504 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 130935856 130935856 + Missense_Mutation SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb SF3B1 23451 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 198266611 198266611 + Missense_Mutation SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb SHKBP1 92799 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 41094601 41094601 + Missense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb SIK1 150094 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 44840177 44840177 + Silent SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb SLC4A10 57282 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 162661045 162661046 + Frame_Shift_Del DEL AG AG - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb SLITRK6 84189 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 86370082 86370082 + Missense_Mutation SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb STAG1 10274 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 136240212 136240212 + Frame_Shift_Del DEL T T - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb STAT2 6773 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 56745117 56745117 + Silent SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb STK32B 55351 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 5461876 5461876 + Missense_Mutation SNP T T C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb SUSD4 55061 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 223408420 223408420 + Silent SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TANC1 85461 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 160042345 160042345 + Missense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TMEM132D 121256 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 129558540 129558540 + Silent SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TMEM169 92691 hgsc.bcm.edu;ucsc.edu 37 2 216960807 216960807 + Frame_Shift_Del DEL A A - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TMEM63B 55362 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 44107217 44107217 + Missense_Mutation SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TMIGD1 388364 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 28659092 28659092 + Missense_Mutation SNP T T G novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TRPA1 8989 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 72975792 72975792 + Silent SNP A A C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179404241 179404241 + Nonsense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179476554 179476554 + Missense_Mutation SNP C C A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179485685 179485685 + Missense_Mutation SNP G G A novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb UBIAD1 29914 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 11345857 11345858 + Frame_Shift_Ins INS - - C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb XPO6 23214 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 28115915 28115915 + Silent SNP G G T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb YTHDC2 64848 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 112888982 112888982 + Missense_Mutation SNP G G C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ZBTB20 26137 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 114070318 114070318 + Missense_Mutation SNP C C T novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ZBTB39 9880 hgsc.bcm.edu;ucsc.edu 37 12 57397920 57397923 + Frame_Shift_Del DEL AGGA AGGA - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 AGGA AGGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ZNF252 0 broad.mit.edu 37 8 146202910 146202910 + Frame_Shift_Del DEL T - - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ZNF311 282890 broad.mit.edu;hgsc.bcm.edu 37 6 28967350 28967350 + Frame_Shift_Del DEL T T - novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb ZNF341 84905 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 32377331 32377331 + Missense_Mutation SNP A A C novel TCGA-B0-5698-01A-11D-1669-08 TCGA-B0-5698-10A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 2ddf2fa6-7871-49fb-be2c-8fce6f8e41ed 7f4d9a43-84db-47f3-b579-2ff98bd05afb