Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACLY 47 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 40054059 40054059 + Nonsense_Mutation SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d ACRC 93953 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 70824235 70824235 + Missense_Mutation SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d ATF7IP 55729 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 14577910 14577910 + Missense_Mutation SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d BBS10 79738 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 76740157 76740157 + Silent SNP A A G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d BRDT 676 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 92470105 92470105 + Silent SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d BRPF3 27154 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 36177586 36177586 + Missense_Mutation SNP T T C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d C20orf186 0 broad.mit.edu;ucsc.edu 37 20 31671267 31671267 + Silent SNP T C C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d C6orf163 206412 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 88074934 88074934 + Silent SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d C9orf89 84270 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 95874559 95874559 + Missense_Mutation SNP T T A rs147126180 alternate_allele TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d CABIN1 23523 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 24432627 24432627 + Missense_Mutation SNP C C G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d CCKBR 887 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 6290923 6290923 + Missense_Mutation SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d CLVS1 157807 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 62412012 62412012 + Splice_Site SNP A A T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d COL24A1 255631 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 86362087 86362087 + Silent SNP T T G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d CSRNP1 64651 broad.mit.edu;ucsc.edu 37 3 39185098 39185098 + Missense_Mutation SNP C A A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d CYP1A2 1544 broad.mit.edu 37 15 75047169 75047169 + Missense_Mutation SNP C T T rs28399424 bycluster;byfrequency TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d DDX20 11218 hgsc.bcm.edu 37 1 112305403 112305403 + Missense_Mutation SNP T T A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d DHRS13 147015 broad.mit.edu;ucsc.edu 37 17 27225663 27225663 + Silent SNP C T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d DPP9 91039 hgsc.bcm.edu 37 19 4703896 4703916 + In_Frame_Del DEL ACCTTGGTGGCAGAAGGTCAG ACCTTGGTGGCAGAAGGTCAG - novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 ACCTTGGTGGCAGAAGGTCAG ACCTTGGTGGCAGAAGGTCAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d EEA1 8411 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 93202807 93202807 + Missense_Mutation SNP T T A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d ELP4 26610 broad.mit.edu 37 11 31541630 31541630 + Missense_Mutation SNP T C C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d FBXO11 80204 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 48050392 48050392 + Silent SNP A A T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d FLG2 388698 broad.mit.edu;hgsc.bcm.edu 37 1 152324078 152324078 + Nonsense_Mutation SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d FLG2 388698 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 152326741 152326741 + Missense_Mutation SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d FRMPD4 9758 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 12734955 12734955 + Missense_Mutation SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d FTSJD1 55783 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71319019 71319019 + Missense_Mutation SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d GALNT5 11227 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 158165091 158165091 + Missense_Mutation SNP A A C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d GPRIN1 114787 hgsc.bcm.edu 37 5 176026120 176026143 + In_Frame_Del DEL CTCAAAGACCCAGGATCCTCCTTC CTCAAAGACCCAGGATCCTCCTTC - rs142779818 bycluster;by1000genomes TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 CTCAAAGACCCAGGATCCTCCTTC CTCAAAGACCCAGGATCCTCCTTC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d HSPG2 3339 hgsc.bcm.edu 37 1 22199879 22199880 + Frame_Shift_Ins INS - - G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d IGDCC3 9543 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 65628159 65628159 + Missense_Mutation SNP T T A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d ITPRIPL2 162073 broad.mit.edu 37 16 19127313 19127313 + Silent SNP C T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d KCNH4 23415 broad.mit.edu 37 17 40315894 40315894 + Frame_Shift_Del DEL C - - novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d KCNU1 157855 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 36790510 36790510 + Silent SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d KLHDC1 122773 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 50206889 50206889 + Missense_Mutation SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d KRT7 3855 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 52629134 52629134 + Nonsense_Mutation SNP G G T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d LAMA3 3909 broad.mit.edu;ucsc.edu 37 18 21508604 21508604 + Missense_Mutation SNP T C C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d LAMA3 3909 hgsc.bcm.edu 37 18 21441744 21441744 + Silent SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d LAMC2 3918 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 183196680 183196680 + Missense_Mutation SNP A A T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d LRRC33 375387 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 196387147 196387147 + Missense_Mutation SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MAGEC1 9947 hgsc.bcm.edu 37 X 140993904 140993906 + In_Frame_Del DEL CCC CCC - novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 CCC CCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MAGI1 9223 hgsc.bcm.edu 37 3 65425579 65425579 + Silent SNP C C T rs148523603 by1000genomes TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MAP7D2 256714 broad.mit.edu 37 X 20074911 20074911 + Splice_Site SNP T C C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MDM1 56890 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 68720392 68720392 + Silent SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MIR665 100126315 broad.mit.edu;hgsc.bcm.edu 37 14 101341381 101341381 + RNA SNP G G T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MORC4 79710 hgsc.bcm.edu;ucsc.edu 37 X 106236587 106236588 + Frame_Shift_Ins INS - - A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d MOV10L1 54456 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 50558941 50558941 + Nonsense_Mutation SNP C C T rs150693045 by1000genomes TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d NBR1 4077 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 41345527 41345527 + Missense_Mutation SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d OR52I1 390037 broad.mit.edu;ucsc.edu 37 11 4616186 4616186 + Missense_Mutation SNP G C C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d P2RY8 286530 hgsc.bcm.edu;ucsc.edu 37 X 1585213 1585213 + Missense_Mutation SNP A A G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PARD6B 84612 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 49366295 49366295 + Missense_Mutation SNP A A G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A A G A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PARP1 142 broad.mit.edu;ucsc.edu 37 1 226561930 226561930 + Silent SNP A G G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PGM5 5239 hgsc.bcm.edu 37 9 71094451 71094452 + Frame_Shift_Ins INS - - C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PHKB 5257 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 47698832 47698832 + Missense_Mutation SNP A A C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PIGO 84720 broad.mit.edu;ucsc.edu 37 9 35090534 35090534 + Missense_Mutation SNP T G G novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PLA2G2F 64600 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 20466689 20466689 + Silent SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PLA2G4C 8605 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 48608631 48608631 + Missense_Mutation SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PPARG 5468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 12434123 12434123 + Missense_Mutation SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PRB1 5542 broad.mit.edu 37 12 11506350 11506350 + Silent SNP C T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PRCC 5546 broad.mit.edu;ucsc.edu 37 1 156764508 156764508 + Missense_Mutation SNP G T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PRDM9 56979 broad.mit.edu 37 5 23527472 23527472 + Missense_Mutation SNP G A A rs112666693 TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PRKCSH 5589 broad.mit.edu 37 19 11558317 11558317 + Missense_Mutation SNP C T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d PSD3 23362 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 18413784 18413784 + Missense_Mutation SNP C C A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d RRM1 6240 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 4133183 4133183 + Missense_Mutation SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d RYR2 6262 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 237886484 237886484 + Missense_Mutation SNP G G T rs183911939 by1000genomes;alternate_allele TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d SCMH1 22955 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 41608634 41608634 + Missense_Mutation SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d SLC9A7 84679 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 46522060 46522060 + Missense_Mutation SNP A A C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d SMARCA4 6597 broad.mit.edu 37 19 11132522 11132522 + Missense_Mutation SNP C A A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d TATDN1 83940 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 125535229 125535229 + Missense_Mutation SNP A A C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d TCEAL3 85012 broad.mit.edu;hgsc.bcm.edu 37 X 102864047 102864047 + Missense_Mutation SNP G G C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d UBR3 130507 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 170806129 170806129 + Silent SNP T T C novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d UBR3 130507 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 170806130 170806130 + Nonsense_Mutation SNP C C T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d Unknown 0 broad.mit.edu 37 10 29079435 29079435 + RNA SNP G T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d Unknown 0 broad.mit.edu 37 15 62534752 62534753 + RNA INS - T T novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d Unknown 0 broad.mit.edu 37 9 66468984 66468984 + RNA SNP A C C rs2337649 bycluster;alternate_allele TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d WDR52 55779 broad.mit.edu 37 3 113049451 113049451 + Missense_Mutation SNP A C C rs79365690 TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d XPNPEP3 63929 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 41310325 41310325 + Missense_Mutation SNP G G A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d XPO7 23039 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 21827777 21827777 + Missense_Mutation SNP T T A novel TCGA-B0-5702-01A-11D-1534-10 TCGA-B0-5702-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 780b3f3e-1c49-40de-9131-65c4df9ebba6 abcf3dd7-5e80-4f2d-a516-fb71ad14f79d