Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AADAC 13 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 151545364 151545364 + Missense_Mutation SNP C C G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 ABCB5 340273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 20682904 20682904 + Silent SNP A A C novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 AGAP3 116988 broad.mit.edu 37 7 150825758 150825758 + Missense_Mutation SNP A C C novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 AHCYL2 23382 broad.mit.edu 37 7 128865042 128865042 + Frame_Shift_Del DEL C - - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 AMOTL2 51421 hgsc.bcm.edu 37 3 134079242 134079243 + Frame_Shift_Ins INS - - C novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 ATM 472 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 108196255 108196255 + Missense_Mutation SNP C C T novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 BRD4 23476 hgsc.bcm.edu 37 19 15383793 15383796 + Frame_Shift_Del DEL CGTT CGTT - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 CGTT CGTT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 C20orf94 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 10604013 10604013 + Nonsense_Mutation SNP G G T novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 CCNF 899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 2506955 2506955 + Silent SNP G G A novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 CIC 23152 hgsc.bcm.edu 37 19 42795826 42795827 + Frame_Shift_Del DEL GG GG - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 GG GG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 DNAH17 8632 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 76506511 76506511 + Silent SNP G G T novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 FAM155A 728215 broad.mit.edu;ucsc.edu 37 13 108518837 108518837 + Missense_Mutation SNP C G G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 FMN2 56776 hgsc.bcm.edu 37 1 240371034 240371034 + Silent SNP A A C rs150102515 byfrequency TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 GLT8D2 83468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 104387219 104387219 + Missense_Mutation SNP A A C novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 IGDCC3 9543 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 65621770 65621770 + Missense_Mutation SNP G G T novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 IL1RL2 8808 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 102851636 102851636 + Frame_Shift_Del DEL C C - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 KCNJ12 3768 hgsc.bcm.edu 37 17 21318741 21318741 + Silent SNP C C T rs75113504 TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 KIAA0174 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71961539 71961539 + Missense_Mutation SNP C C G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 KLF8 11279 broad.mit.edu 37 X 56310756 56310756 + Silent SNP T G G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 LOC91316 0 broad.mit.edu 37 22 23980988 23980988 + RNA SNP G A A novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 LTA4H 4048 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 96414872 96414872 + Frame_Shift_Del DEL A A - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 MECOM 2122 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 168833806 168833806 + Missense_Mutation SNP C C A novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 MIR663B 100313824 broad.mit.edu 37 2 133014651 133014652 + RNA INS - C C rs111708138 TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 NEFH 4744 broad.mit.edu;hgsc.bcm.edu 37 22 29879399 29879399 + Missense_Mutation SNP A A G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 PCLO 27445 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 82595325 82595325 + Missense_Mutation SNP T T C novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 PDE1C 5137 broad.mit.edu 37 7 32338297 32338304 + Frame_Shift_Del DEL GGCGCTCC - - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 GGCGCTCC GGCGCTCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 PKHD1 5314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 51799018 51799018 + Missense_Mutation SNP G G A novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 POLDIP2 26073 broad.mit.edu 37 17 26684390 26684391 + Splice_Site INS - C C rs11448856 bycluster;by1000genomes TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 POM121L9P 29774 broad.mit.edu 37 22 24659591 24659591 + RNA SNP A G G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 POM121L9P 29774 broad.mit.edu 37 22 24659593 24659593 + RNA SNP C T T novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 PTPRF 5792 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 44070946 44070946 + Missense_Mutation SNP C C G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 SCG2 7857 hgsc.bcm.edu;ucsc.edu 37 2 224463149 224463149 + Frame_Shift_Del DEL G G - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 SETD2 29072 hgsc.bcm.edu;ucsc.edu 37 3 47163990 47164005 + Frame_Shift_Del DEL TTTGACCAAAGGGGAT TTTGACCAAAGGGGAT - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 TTTGACCAAAGGGGAT TTTGACCAAAGGGGAT TTTGACCAAAGGGGAT - TTTGACCAAAGGGGAT TTTGACCAAAGGGGAT Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 SLC22A11 55867 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 64337144 64337144 + Missense_Mutation SNP T T G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 SLC27A2 11001 hgsc.bcm.edu 37 15 50474899 50474900 + Frame_Shift_Ins INS - - T novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 SLC28A1 9154 hgsc.bcm.edu 37 15 85438311 85438312 + In_Frame_Ins INS - - TTG rs75301511 alternate_allele TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 TDRD3 81550 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 61103273 61103273 + Silent SNP A A G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 THSD7B 80731 hgsc.bcm.edu;ucsc.edu 37 2 137928375 137928375 + Frame_Shift_Del DEL T T - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 TLE3 7090 hgsc.bcm.edu;ucsc.edu 37 15 70368448 70368448 + Frame_Shift_Del DEL A A - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 UGT2A3 79799 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 69816847 69816847 + Missense_Mutation SNP T T G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 VAX2 25806 broad.mit.edu 37 2 71160067 71160067 + Silent SNP G A A novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 WDFY3 23001 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 85742692 85742692 + Missense_Mutation SNP C C G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 ZAN 7455 hgsc.bcm.edu 37 7 100371476 100371477 + Frame_Shift_Ins INS - - G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 ZFYVE26 23503 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 68234548 68234548 + Missense_Mutation SNP C C G novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2 ZNF800 168850 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 127013660 127013660 + Frame_Shift_Del DEL G G - novel TCGA-B8-4622-01A-02D-1553-08 TCGA-B8-4622-11A-01D-1553-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9713397b-0a7c-4fc6-a7b3-042a56d11d1e 153d19e5-72d1-478f-818e-42cc4ac138e2