Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACBD5 91452 hgsc.bcm.edu 37 10 27497270 27497270 + Missense_Mutation SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ACP5 54 hgsc.bcm.edu 37 19 11685841 11685841 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ADI1 55256 hgsc.bcm.edu 37 2 3504658 3504658 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 AMY1B 277 hgsc.bcm.edu 37 1 104233933 104233933 + Missense_Mutation SNP A A G rs1130744 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ARHGEF11 9826 hgsc.bcm.edu 37 1 156907115 156907115 + Missense_Mutation SNP T T C rs63387061 bycluster;byfrequency;by1000genomes TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ASCL3 56676 hgsc.bcm.edu 37 11 8959460 8959460 + Nonsense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ATP8A2 51761 hgsc.bcm.edu;ucsc.edu 37 13 26594067 26594067 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ATR 545 hgsc.bcm.edu 37 3 142254950 142254950 + Missense_Mutation SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C C A C C Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 AUTS2 26053 hgsc.bcm.edu;ucsc.edu 37 7 69364395 69364395 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 BAK1 578 hgsc.bcm.edu 37 6 33545340 33545340 + Silent SNP G G A rs2227925 bycluster;byfrequency;by1000genomes TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 BAT2L2 0 hgsc.bcm.edu 37 1 171509616 171509616 + Missense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 BAT2L2 0 hgsc.bcm.edu 37 1 171526904 171526904 + Missense_Mutation SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 BCL7A 605 hgsc.bcm.edu;ucsc.edu 37 12 122473306 122473306 + Missense_Mutation SNP T T G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 BRWD1 54014 hgsc.bcm.edu;ucsc.edu 37 21 40571019 40571019 + Missense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 C2CD3 26005 hgsc.bcm.edu;ucsc.edu 37 11 73814557 73814557 + Silent SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 C7orf41 222166 hgsc.bcm.edu 37 7 30174891 30174891 + Missense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CASR 846 hgsc.bcm.edu;ucsc.edu 37 3 121980855 121980855 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CCDC123 0 hgsc.bcm.edu 37 19 33444588 33444588 + Missense_Mutation SNP T T G rs73035551 bycluster TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CCS 9973 hgsc.bcm.edu 37 11 66373234 66373234 + Missense_Mutation SNP T T G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CDH2 1000 hgsc.bcm.edu 37 18 25593663 25593663 + Missense_Mutation SNP G G C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CLTCL1 8218 hgsc.bcm.edu 37 22 19220820 19220820 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CNTNAP4 85445 hgsc.bcm.edu 37 16 76509834 76509834 + Splice_Site SNP A A T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 COL2A1 1280 hgsc.bcm.edu;ucsc.edu 37 12 48379700 48379700 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 COX6B1 1340 hgsc.bcm.edu;ucsc.edu 37 19 36142196 36142196 + Silent SNP T T C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CSE1L 1434 hgsc.bcm.edu;ucsc.edu 37 20 47707554 47707554 + Missense_Mutation SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 CSTF2 1478 hgsc.bcm.edu 37 X 100088269 100088269 + Silent SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 DCTN2 10540 hgsc.bcm.edu;ucsc.edu 37 12 57926027 57926027 + Missense_Mutation SNP T T G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 DEFB107A 245910 hgsc.bcm.edu 37 8 7673126 7673126 + Missense_Mutation SNP C C A rs2246582 bycluster;byfrequency TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 DUSP3 1845 hgsc.bcm.edu;ucsc.edu 37 17 41847147 41847147 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 EPHA3 2042 hgsc.bcm.edu 37 3 89468539 89468539 + Missense_Mutation SNP A A T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A A T A A Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ERLIN2 11160 hgsc.bcm.edu;ucsc.edu 37 8 37611039 37611039 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 EXPH5 23086 hgsc.bcm.edu;ucsc.edu 37 11 108384025 108384025 + Missense_Mutation SNP T T G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FAM108C1 58489 hgsc.bcm.edu;ucsc.edu 37 15 81046580 81046580 + Missense_Mutation SNP A A G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FAM129A 116496 hgsc.bcm.edu;ucsc.edu 37 1 184859254 184859254 + Missense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FAM166B 730112 hgsc.bcm.edu;ucsc.edu 37 9 35563020 35563020 + Missense_Mutation SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FCGR1B 2210 hgsc.bcm.edu 37 1 120927292 120927292 + Missense_Mutation SNP T T C rs1050204 bycluster;byfrequency;by2hit2allele TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FNBP1 23048 hgsc.bcm.edu;ucsc.edu 37 9 132741632 132741632 + Missense_Mutation SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FRMPD1 22844 hgsc.bcm.edu;ucsc.edu 37 9 37731077 37731077 + Missense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 FTCD 10841 hgsc.bcm.edu 37 21 47570414 47570414 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 GPR112 139378 hgsc.bcm.edu;ucsc.edu 37 X 135432122 135432122 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C C G C C Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 GPR98 84059 hgsc.bcm.edu;ucsc.edu 37 5 89925092 89925092 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HAX1 10456 hgsc.bcm.edu;ucsc.edu 37 1 154247938 154247938 + Missense_Mutation SNP G G C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HDAC6 10013 hgsc.bcm.edu 37 X 48681739 48681739 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HERC2 8924 hgsc.bcm.edu;ucsc.edu 37 15 28414709 28414709 + Missense_Mutation SNP G G C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G G C G G Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HERC2 8924 hgsc.bcm.edu;ucsc.edu 37 15 28414719 28414719 + Silent SNP A A G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A A G A A Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HGC6.3 100128124 hgsc.bcm.edu 37 6 168376847 168376847 + Silent SNP C C G rs77867907 bycluster TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HLA-DRB5 3127 hgsc.bcm.edu 37 6 32497905 32497905 + Nonsense_Mutation SNP G G A rs79754118 bycluster TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HMCN1 83872 hgsc.bcm.edu 37 1 185704113 185704113 + Missense_Mutation SNP G G C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 HSPC159 0 hgsc.bcm.edu;ucsc.edu 37 2 64682738 64682738 + Missense_Mutation SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ITPKB 3707 hgsc.bcm.edu 37 1 226924364 226924364 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ITPR3 3710 hgsc.bcm.edu 37 6 33662730 33662730 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G G A G G Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 LEO1 123169 hgsc.bcm.edu 37 15 52254683 52254683 + Silent SNP T T C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 LRRC34 151827 hgsc.bcm.edu;ucsc.edu 37 3 169514626 169514626 + Missense_Mutation SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 MAP4K4 9448 hgsc.bcm.edu;ucsc.edu 37 2 102490653 102490653 + Silent SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 MARS2 92935 hgsc.bcm.edu 37 2 198571042 198571042 + Missense_Mutation SNP T T G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 MCM6 4175 hgsc.bcm.edu 37 2 136626383 136626383 + Missense_Mutation SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 MED17 9440 hgsc.bcm.edu 37 11 93526948 93526948 + Missense_Mutation SNP A A C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 MUC16 94025 hgsc.bcm.edu;ucsc.edu 37 19 9087220 9087220 + Missense_Mutation SNP A A G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A A G A A Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 MUC6 4588 hgsc.bcm.edu 37 11 1018289 1018289 + Silent SNP C C T rs77222781 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 NBPF3 84224 hgsc.bcm.edu 37 1 21798206 21798206 + Silent SNP A A G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 NBPF3 84224 hgsc.bcm.edu 37 1 21808128 21808128 + Missense_Mutation SNP A A T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 OR2J2 26707 hgsc.bcm.edu;ucsc.edu 37 6 29141432 29141433 + Frame_Shift_Ins INS - - A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 OR2M7 391196 hgsc.bcm.edu 37 1 248487282 248487282 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 OR2T35 403244 hgsc.bcm.edu 37 1 248801633 248801633 + Silent SNP A A G rs74901534 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PABPC1 26986 hgsc.bcm.edu 37 8 101730043 101730043 + Missense_Mutation SNP G G C rs113614781 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52584502 52584502 + Missense_Mutation SNP A A G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A A G A A Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PDPR 55066 hgsc.bcm.edu 37 16 70172890 70172890 + Missense_Mutation SNP C C T rs142218067 by1000genomes TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 POLR3A 11128 hgsc.bcm.edu;ucsc.edu 37 10 79761970 79761970 + Missense_Mutation SNP G G T rs137961403 alternate_allele TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 POTED 317754 hgsc.bcm.edu 37 21 14987811 14987811 + Missense_Mutation SNP C C T rs56121372 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 POTEG 404785 hgsc.bcm.edu 37 14 19553436 19553436 + Missense_Mutation SNP C C T rs71228614 alternate_allele TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PRSS1 5644 hgsc.bcm.edu 37 7 142457343 142457343 + Missense_Mutation SNP C C T rs143974175 byfrequency TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PRSS1 5644 hgsc.bcm.edu 37 7 142457347 142457347 + Silent SNP C C T rs146454344 byfrequency TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PRUNE2 158471 hgsc.bcm.edu 37 9 79318381 79318381 + Silent SNP A A T rs113471142 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PTK2 5747 hgsc.bcm.edu 37 8 141745400 141745400 + Silent SNP G G T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 PUF60 22827 hgsc.bcm.edu 37 8 144899131 144899131 + Silent SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 RASSF7 8045 hgsc.bcm.edu 37 11 563219 563219 + Nonsense_Mutation SNP C C T rs139977222 TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ROBO3 64221 hgsc.bcm.edu 37 11 124741007 124741007 + Silent SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 RRNAD1 51093 hgsc.bcm.edu 37 1 156706497 156706497 + Silent SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 RSPH10B 222967 hgsc.bcm.edu 37 7 5972412 5972412 + Splice_Site SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SCAND3 114821 hgsc.bcm.edu 37 6 28543057 28543057 + Silent SNP T T C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SESTD1 91404 hgsc.bcm.edu 37 2 179997085 179997085 + Missense_Mutation SNP A A C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SF3B1 23451 hgsc.bcm.edu;ucsc.edu 37 2 198257042 198257042 + Silent SNP A A C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SH3RF2 153769 hgsc.bcm.edu;ucsc.edu 37 5 145428752 145428752 + Silent SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SIGLEC7 27036 hgsc.bcm.edu;ucsc.edu 37 19 51645785 51645785 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SLC34A2 10568 hgsc.bcm.edu 37 4 25667856 25667856 + Silent SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SLC39A10 57181 hgsc.bcm.edu;ucsc.edu 37 2 196593015 196593015 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SLFN13 146857 hgsc.bcm.edu;ucsc.edu 37 17 33769171 33769171 + Missense_Mutation SNP A A G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SNX11 29916 hgsc.bcm.edu 37 17 46190702 46190702 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SNX9 51429 hgsc.bcm.edu;ucsc.edu 37 6 158330994 158330994 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SPAG17 200162 hgsc.bcm.edu;ucsc.edu 37 1 118658052 118658052 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SPATS2 65244 hgsc.bcm.edu;ucsc.edu 37 12 49854814 49854814 + Missense_Mutation SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SSC5D 284297 hgsc.bcm.edu 37 19 56029201 56029201 + Missense_Mutation SNP C C A rs74585733 bycluster;by1000genomes TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SSC5D 284297 hgsc.bcm.edu 37 19 56029543 56029543 + Silent SNP C C T rs114559746 bycluster;byfrequency;by1000genomes TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SSC5D 284297 hgsc.bcm.edu 37 19 56029556 56029556 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SSC5D 284297 hgsc.bcm.edu 37 19 56029577 56029577 + Missense_Mutation SNP T T G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 SSC5D 284297 hgsc.bcm.edu 37 19 56029606 56029606 + Silent SNP G G A rs76326175 bycluster;byfrequency;by1000genomes TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TAPBPL 55080 hgsc.bcm.edu;ucsc.edu 37 12 6567862 6567862 + Missense_Mutation SNP T T A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TARBP1 6894 hgsc.bcm.edu;ucsc.edu 37 1 234563467 234563467 + Missense_Mutation SNP A A C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TAS2R3 50831 hgsc.bcm.edu 37 7 141464682 141464682 + Missense_Mutation SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TEKT4 150483 hgsc.bcm.edu 37 2 95541442 95541442 + Missense_Mutation SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TMCO3 55002 hgsc.bcm.edu 37 13 114149923 114149923 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TMX4 56255 hgsc.bcm.edu;ucsc.edu 37 20 7962956 7962956 + Missense_Mutation SNP T T C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TP53 7157 hgsc.bcm.edu;ucsc.edu 37 17 7573974 7573974 + Missense_Mutation SNP C C A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C C A C C Unknown Valid Somatic Phase_I WXS PGM SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 TRANK1 9881 hgsc.bcm.edu;ucsc.edu 37 3 36872707 36872707 + Silent SNP C C T novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 UBR1 197131 hgsc.bcm.edu;ucsc.edu 37 15 43320014 43320014 + Missense_Mutation SNP T T C novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 UGT8 7368 hgsc.bcm.edu;ucsc.edu 37 4 115585285 115585286 + Frame_Shift_Del DEL GA GA - novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 GA GA . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ZNF134 7693 hgsc.bcm.edu 37 19 58132725 58132725 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ZNF180 7733 hgsc.bcm.edu 37 19 45001361 45001361 + Missense_Mutation SNP G G A novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753 ZNF667 63934 hgsc.bcm.edu;ucsc.edu 37 19 56953747 56953747 + Missense_Mutation SNP C C G novel TCGA-BP-4176-01A-02D-1366-10 TCGA-BP-4176-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 33e2b6cb-7c03-4090-bef5-ba13f7271a19 1eba4efc-588d-4bd6-9a70-3dd29f262753