Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS20 80070 hgsc.bcm.edu;ucsc.edu 37 12 43777460 43777460 + Silent SNP C C A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e APC 324 hgsc.bcm.edu 37 5 112177788 112177788 + Missense_Mutation SNP G G T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e BCAS3 54828 hgsc.bcm.edu;ucsc.edu 37 17 58952032 58952032 + Silent SNP C C A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e CASKIN1 57524 hgsc.bcm.edu 37 16 2236740 2236740 + Missense_Mutation SNP G G A rs141907746 TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e CDCP1 64866 hgsc.bcm.edu 37 3 45127493 45127493 + Silent SNP C C T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e CPSF1 29894 hgsc.bcm.edu 37 8 145623779 145623779 + Missense_Mutation SNP G G T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e CWH43 80157 hgsc.bcm.edu;ucsc.edu 37 4 49005842 49005842 + Missense_Mutation SNP G G T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e DNHD1 144132 hgsc.bcm.edu 37 11 6567893 6567893 + Missense_Mutation SNP G G C novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e EGFR 1956 hgsc.bcm.edu 37 7 55259455 55259455 + Missense_Mutation SNP T T C novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e ETNK1 55500 hgsc.bcm.edu;ucsc.edu 37 12 22826447 22826447 + Silent SNP A A G novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e FBXO10 26267 hgsc.bcm.edu 37 9 37537374 37537374 + Silent SNP T T A rs186419638 by1000genomes TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e GABRQ 55879 hgsc.bcm.edu;ucsc.edu 37 X 151808916 151808916 + Missense_Mutation SNP C C T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e GRIA2 2891 hgsc.bcm.edu;ucsc.edu 37 4 158254482 158254482 + Missense_Mutation SNP C C A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e HCFC2 29915 hgsc.bcm.edu;ucsc.edu 37 12 104461864 104461864 + Missense_Mutation SNP A A C novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e HERC1 8925 hgsc.bcm.edu;ucsc.edu 37 15 64005710 64005710 + Silent SNP C C T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e HSFX1 100506164 hgsc.bcm.edu 37 X 148856615 148856615 + Missense_Mutation SNP T T G novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e LAMA5 3911 hgsc.bcm.edu 37 20 60906109 60906109 + Missense_Mutation SNP T T C novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e LTF 4057 hgsc.bcm.edu 37 3 46480866 46480866 + Missense_Mutation SNP A A T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e MUC16 94025 hgsc.bcm.edu 37 19 9085330 9085330 + Missense_Mutation SNP T T C novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e NID1 4811 hgsc.bcm.edu 37 1 236143954 236143954 + Splice_Site SNP C C T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e NRK 203447 hgsc.bcm.edu;ucsc.edu 37 X 105197102 105197102 + Silent SNP G G A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e PLA2G2C 391013 hgsc.bcm.edu;ucsc.edu 37 1 20499305 20499305 + Missense_Mutation SNP C C T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e PRSS38 339501 hgsc.bcm.edu;ucsc.edu 37 1 228033871 228033871 + Missense_Mutation SNP G G A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e RP1 6101 hgsc.bcm.edu 37 8 55540233 55540233 + Missense_Mutation SNP T T C novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e SHMT2 6472 hgsc.bcm.edu 37 12 57627119 57627119 + Silent SNP C C A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e SLC10A2 6555 hgsc.bcm.edu 37 13 103718249 103718249 + Nonsense_Mutation SNP A A T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e SPTA1 6708 hgsc.bcm.edu;ucsc.edu 37 1 158621257 158621257 + Missense_Mutation SNP T T G novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e ST3GAL4 6484 hgsc.bcm.edu;ucsc.edu 37 11 126283465 126283465 + Silent SNP C C T novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e SYT5 6861 hgsc.bcm.edu 37 19 55690359 55690359 + Silent SNP G G A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e TGM1 7051 hgsc.bcm.edu 37 14 24729679 24729679 + Missense_Mutation SNP A A G novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e TNS1 7145 hgsc.bcm.edu 37 2 218683139 218683139 + Missense_Mutation SNP G G A rs34291329 bycluster;byfrequency;by1000genomes TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e USP18 11274 hgsc.bcm.edu 37 22 18640560 18640560 + Missense_Mutation SNP C C A novel TCGA-BP-4354-01A-02D-1366-10 TCGA-BP-4354-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 48897095-d6f8-481a-9dfb-b1d1e6b4c723 ee2d7355-8f21-4626-9979-9dcf6d03a88e