Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADD1 118 hgsc.bcm.edu 37 4 2900254 2900254 + Missense_Mutation SNP T T C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c AQP7 364 hgsc.bcm.edu 37 9 33387073 33387073 + Silent SNP G G A rs73645276 bycluster;byfrequency TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c ARHGAP22 58504 hgsc.bcm.edu;ucsc.edu 37 10 49812835 49812835 + Missense_Mutation SNP T T A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c BARD1 580 hgsc.bcm.edu;ucsc.edu 37 2 215595187 215595187 + Missense_Mutation SNP T T G novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c C9orf64 84267 hgsc.bcm.edu;ucsc.edu 37 9 86570341 86570341 + Silent SNP C C T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c CNTNAP1 8506 hgsc.bcm.edu 37 17 40839832 40839832 + Missense_Mutation SNP G G T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c CRIPAK 285464 hgsc.bcm.edu 37 4 1388429 1388429 + Missense_Mutation SNP G G A rs79298048 bycluster;byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c CXorf41 0 hgsc.bcm.edu;ucsc.edu 37 X 106462183 106462183 + Missense_Mutation SNP G G A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c DBNDD1 79007 hgsc.bcm.edu 37 16 90075259 90075259 + Silent SNP C C T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c DCHS2 54798 hgsc.bcm.edu 37 4 155410650 155410650 + Missense_Mutation SNP T T C rs72731014 bycluster;byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c DMGDH 29958 hgsc.bcm.edu;ucsc.edu 37 5 78322310 78322310 + Missense_Mutation SNP A A T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c EEA1 8411 hgsc.bcm.edu 37 12 93192687 93192687 + Missense_Mutation SNP T T C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c ERMP1 79956 hgsc.bcm.edu;ucsc.edu 37 9 5801303 5801303 + Missense_Mutation SNP C C T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c ESM1 11082 hgsc.bcm.edu;ucsc.edu 37 5 54277855 54277855 + Missense_Mutation SNP T T G novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c GPR45 11250 hgsc.bcm.edu;ucsc.edu 37 2 105859154 105859154 + Nonsense_Mutation SNP G G A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c GRIN2A 2903 hgsc.bcm.edu 37 16 9857305 9857305 + Missense_Mutation SNP G G A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c GRK5 2869 hgsc.bcm.edu;ucsc.edu 37 10 121190918 121190918 + Missense_Mutation SNP G G A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c ILVBL 10994 hgsc.bcm.edu 37 19 15229993 15229993 + Silent SNP A A G rs1131177 bycluster;byfrequency;byhapmap;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c ITGA11 22801 hgsc.bcm.edu;ucsc.edu 37 15 68661592 68661592 + Silent SNP A A G novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c LRRC7 57554 hgsc.bcm.edu;ucsc.edu 37 1 70555438 70555438 + Missense_Mutation SNP G G A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c MLLT6 4302 hgsc.bcm.edu 37 17 36875827 36875827 + Missense_Mutation SNP T T C rs62620198 bycluster;byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c MPHOSPH6 10200 hgsc.bcm.edu 37 16 82203742 82203742 + Silent SNP T T C rs1134847 bycluster;byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c MTCH2 23788 hgsc.bcm.edu 37 11 47663986 47663986 + Missense_Mutation SNP C C T rs72909898 bycluster TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c MTF1 4520 hgsc.bcm.edu;ucsc.edu 37 1 38300849 38300849 + Missense_Mutation SNP T T C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c MTRR 4552 hgsc.bcm.edu;ucsc.edu 37 5 7897260 7897260 + Nonsense_Mutation SNP G G T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c NBPF14 25832 hgsc.bcm.edu 37 1 148004722 148004722 + Silent SNP C C T rs138813155 byfrequency TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c NBPF3 84224 hgsc.bcm.edu 37 1 21806631 21806631 + Silent SNP G G T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c NBPF3 84224 hgsc.bcm.edu 37 1 21806710 21806710 + Missense_Mutation SNP T T A rs71512986 alternate_allele TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c NBPF3 84224 hgsc.bcm.edu 37 1 21808250 21808250 + Missense_Mutation SNP C C G novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c NBPF3 84224 hgsc.bcm.edu 37 1 21809709 21809709 + Missense_Mutation SNP A A C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c NPR2 4882 hgsc.bcm.edu 37 9 35794073 35794073 + Missense_Mutation SNP G G C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c OR10G7 390265 hgsc.bcm.edu 37 11 123909234 123909234 + Missense_Mutation SNP T T C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c OR2T35 403244 hgsc.bcm.edu 37 1 248801602 248801603 + Frame_Shift_Ins INS - - CA novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c PDCL 5082 hgsc.bcm.edu;ucsc.edu 37 9 125582825 125582825 + Missense_Mutation SNP G G A rs147830688 byfrequency TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c PELP1 27043 hgsc.bcm.edu 37 17 4576620 4576620 + Silent SNP C C T rs55677157 byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c PKNOX2 63876 hgsc.bcm.edu 37 11 125300008 125300008 + Missense_Mutation SNP A A C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c PLEKHH1 57475 hgsc.bcm.edu;ucsc.edu 37 14 68045252 68045252 + Missense_Mutation SNP G G T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c RIF1 55183 hgsc.bcm.edu 37 2 152319431 152319431 + Missense_Mutation SNP C C A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c RREB1 6239 hgsc.bcm.edu;ucsc.edu 37 6 7189542 7189542 + Missense_Mutation SNP G G T novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c SCARA5 286133 hgsc.bcm.edu 37 8 27779093 27779093 + Missense_Mutation SNP G G A rs118119884 bycluster;byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c SPATC1 375686 hgsc.bcm.edu 37 8 145086876 145086876 + Missense_Mutation SNP T T C rs60050811 bycluster;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c STK32C 282974 hgsc.bcm.edu 37 10 134036270 134036270 + Missense_Mutation SNP G G A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c TRO 7216 hgsc.bcm.edu 37 X 54957276 54957276 + Silent SNP T T A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c TRPV6 55503 hgsc.bcm.edu 37 7 142583152 142583152 + Missense_Mutation SNP T T C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c TTN 7273 hgsc.bcm.edu;ucsc.edu 37 2 179405009 179405009 + Silent SNP T T A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c USH2A 7399 hgsc.bcm.edu;ucsc.edu 37 1 216373233 216373233 + Missense_Mutation SNP T T C novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c VCL 7414 hgsc.bcm.edu 37 10 75854046 75854046 + Missense_Mutation SNP C C A novel TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c WRNIP1 56897 hgsc.bcm.edu;ucsc.edu 37 6 2768965 2768965 + Missense_Mutation SNP A A G rs77289107 bycluster;byfrequency;by1000genomes TCGA-BP-4766-01A-01D-1366-10 TCGA-BP-4766-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 246a22b2-db14-489d-9bd3-3a5e91a5c715 131b822f-4ad9-4645-bab7-665d8fd54a2c