Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACOT8 10005 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 44477168 44477168 + Missense_Mutation SNP G G T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 ACSF2 80221 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 48539834 48539834 + Missense_Mutation SNP T T C novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 B3GNT3 10331 broad.mit.edu 37 19 17918663 17918663 + Missense_Mutation SNP C A A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 C13orf26 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 31526903 31526903 + Missense_Mutation SNP G G T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 C17orf66 256957 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 34182253 34182253 + Silent SNP T T C novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 C8orf84 0 hgsc.bcm.edu 37 8 74005131 74005131 + Missense_Mutation SNP A A G rs59331088 bycluster;by1000genomes TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 COL19A1 1310 broad.mit.edu;ucsc.edu 37 6 70733567 70733567 + Nonsense_Mutation SNP G T T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 CSTF2T 23283 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 53458229 53458229 + Missense_Mutation SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 DDN 23109 broad.mit.edu 37 12 49390707 49390707 + Missense_Mutation SNP G A A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 DMKN 93099 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 36003526 36003526 + Missense_Mutation SNP T T G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 DNAH17 8632 hgsc.bcm.edu 37 17 76486812 76486813 + Frame_Shift_Del DEL AG AG - novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 EPHA8 2046 broad.mit.edu;hgsc.bcm.edu 37 1 22902833 22902833 + Missense_Mutation SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 EXOC4 60412 broad.mit.edu;ucsc.edu 37 7 133059626 133059626 + Missense_Mutation SNP C A A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 FSCB 84075 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 44975908 44975908 + Missense_Mutation SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 HSD17B8 7923 broad.mit.edu;hgsc.bcm.edu 37 6 33173664 33173664 + Missense_Mutation SNP A A G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 INPP5J 27124 broad.mit.edu 37 22 31520974 31520974 + Silent SNP A T T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 LILRA6 79168 hgsc.bcm.edu 37 19 54744772 54744772 + Missense_Mutation SNP T T G rs77717986 TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 LILRA6 79168 hgsc.bcm.edu 37 19 54744777 54744777 + Silent SNP C C T rs76127474 TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 LOC728989 728989 broad.mit.edu 37 1 146494537 146494537 + Silent SNP C T T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 MKS1 54903 broad.mit.edu;hgsc.bcm.edu 37 17 56283522 56283522 + Missense_Mutation SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 MTDH 92140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 98703207 98703207 + Missense_Mutation SNP C C G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 NT5C1B 93034 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 18757590 18757590 + Missense_Mutation SNP A A G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 OSBPL7 114881 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 45894652 45894652 + Silent SNP G G A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 PCDHA2 56146 broad.mit.edu;hgsc.bcm.edu 37 5 140176057 140176057 + Missense_Mutation SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 PIGU 128869 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 33225754 33225754 + Silent SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 POGZ 23126 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 151380970 151380970 + Missense_Mutation SNP G G T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 PPP3CC 5533 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 22370886 22370886 + Missense_Mutation SNP T T G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 PRKAG1 5571 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49396983 49396983 + Missense_Mutation SNP T T G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 PROM1 8842 broad.mit.edu 37 4 16020105 16020105 + Silent SNP G A A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 SF3B2 10992 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 65822560 65822560 + Missense_Mutation SNP C C A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 SHC2 25759 hgsc.bcm.edu 37 19 434718 434718 + Silent SNP G G A rs61749991 bycluster;byfrequency;by1000genomes TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 SLC12A5 57468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 44669098 44669098 + Silent SNP C C T novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 SOAT2 8435 hgsc.bcm.edu;ucsc.edu 37 12 53516966 53516966 + Frame_Shift_Del DEL T T - novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 TAF1C 9013 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 84215586 84215586 + Missense_Mutation SNP G G A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 TRIM28 10155 broad.mit.edu 37 19 59060112 59060112 + Missense_Mutation SNP G A A novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 TRIM5 85363 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 5687233 5687233 + Silent SNP T T C novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 UBE3C 9690 broad.mit.edu;hgsc.bcm.edu 37 7 156967613 156967613 + Missense_Mutation SNP A A G novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 UGGT2 55757 hgsc.bcm.edu;ucsc.edu 37 13 96589247 96589247 + Frame_Shift_Del DEL T T - novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10188321 10188321 + Splice_Site SNP G G T rs5030814 bycluster;alternate_allele TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9 ZBTB38 253461 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 141161609 141161609 + Missense_Mutation SNP T T C novel TCGA-BP-4970-01A-01D-1462-08 TCGA-BP-4970-11A-01D-1462-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 205e81c6-235a-450f-b1f8-80c518eb3478 aeb90fcf-ea28-4119-a410-9e7ce8ddcbc9