Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCB6 10058 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 220075171 220075171 + Missense_Mutation SNP A A C rs151051476 byfrequency;alternate_allele TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ABCF1 23 hgsc.bcm.edu 37 6 30558477 30558478 + Frame_Shift_Ins INS - - A rs72545970 bycluster TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ABP1 26 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 150558103 150558103 + Missense_Mutation SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ACCN5 0 hgsc.bcm.edu;ucsc.edu 37 4 156787340 156787340 + Frame_Shift_Del DEL G G - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ACSM1 116285 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 20651789 20651789 + Silent SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ACTC1 70 broad.mit.edu;hgsc.bcm.edu 37 15 35085454 35085454 + Missense_Mutation SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ADAM2 2515 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 39624434 39624434 + Missense_Mutation SNP A A C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 AKAP11 11215 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 42891796 42891796 + Missense_Mutation SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 AKAP6 9472 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 33292170 33292170 + Silent SNP G G C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ALPK2 115701 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 56204268 56204268 + Missense_Mutation SNP A A G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ANK3 288 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 61829377 61829377 + Silent SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ASMTL 8623 hgsc.bcm.edu 37 X 1522164 1522164 + In_Frame_Del DEL A A - rs113329185 TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ATP5S 27109 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 50790719 50790719 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 BAZ2B 29994 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 160268963 160268963 + Missense_Mutation SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 BTNL9 153579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 180483000 180483000 + Missense_Mutation SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 BTNL9 153579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 180483001 180483001 + Missense_Mutation SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 C11orf46 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 30352900 30352900 + Silent SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 C16orf3 750 hgsc.bcm.edu 37 16 90095596 90095596 + Missense_Mutation SNP A A G rs55742939 TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 C16orf3 750 hgsc.bcm.edu 37 16 90095597 90095597 + Missense_Mutation SNP T T C rs61118444 byfrequency TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 C8orf45 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 67790811 67790811 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 C9orf125 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 104238257 104238257 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CABIN1 23523 broad.mit.edu;hgsc.bcm.edu 37 22 24451598 24451598 + Silent SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CACNA1S 779 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 201013477 201013477 + Silent SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CD19 930 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 28944420 28944420 + Nonsense_Mutation SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CDAN1 146059 hgsc.bcm.edu 37 15 43023193 43023194 + Frame_Shift_Ins INS - - G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CDC42BPB 9578 hgsc.bcm.edu;ucsc.edu 37 14 103416228 103416229 + Frame_Shift_Del DEL GT GT - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 GT GT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CDS2 8760 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 5154171 5154171 + Missense_Mutation SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CDV3 55573 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 133306843 133306843 + Missense_Mutation SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CNOT8 9337 hgsc.bcm.edu;ucsc.edu 37 5 154254886 154254899 + Frame_Shift_Del DEL TGTGGGCGGCTCTA TGTGGGCGGCTCTA - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 TGTGGGCGGCTCTA TGTGGGCGGCTCTA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 CUBN 8029 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 16979763 16979763 + Missense_Mutation SNP A A C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A A C A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 DICER1 23405 broad.mit.edu;ucsc.edu 37 14 95557550 95557550 + Silent SNP C A A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 DLAT 1737 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 111930750 111930750 + Silent SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 DMD 1756 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 31792262 31792262 + Missense_Mutation SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 DNAH3 55567 hgsc.bcm.edu;ucsc.edu 37 16 20998759 20998759 + Frame_Shift_Del DEL T T - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 DNAJB1 3337 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 14627690 14627690 + Missense_Mutation SNP A A C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 DND1 373863 broad.mit.edu 37 5 140052285 140052285 + Frame_Shift_Del DEL T - - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 EBF2 64641 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 25744310 25744310 + Missense_Mutation SNP G G C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 EPPK1 83481 hgsc.bcm.edu 37 8 144940723 144940725 + In_Frame_Del DEL GGC GGC - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 GGC GGC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ETNK1 55500 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 22812052 22812052 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAM113B 0 broad.mit.edu;hgsc.bcm.edu 37 12 47629733 47629733 + Missense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAM114A1 92689 hgsc.bcm.edu;ucsc.edu 37 4 38924467 38924467 + Missense_Mutation SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAM166B 730112 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 35563218 35563218 + Silent SNP T T G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAM166B 730112 broad.mit.edu;ucsc.edu 37 9 35563221 35563221 + Silent SNP A G G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAM171B 165215 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 187615886 187615886 + Silent SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAM69C 125704 hgsc.bcm.edu;ucsc.edu 37 18 72109246 72109246 + Frame_Shift_Del DEL A A - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 FAT2 2196 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 150901058 150901058 + Missense_Mutation SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 GABPA 2551 broad.mit.edu 37 21 27141472 27141472 + Missense_Mutation SNP C A A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 GOT1 2805 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 101163595 101163595 + Nonsense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 GPR111 222611 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 47650019 47650019 + Missense_Mutation SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 GPR171 29909 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 150916820 150916820 + Silent SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 GTF3C2 2976 hgsc.bcm.edu;ucsc.edu 37 2 27550049 27550049 + Frame_Shift_Del DEL G G - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 HERC1 8925 broad.mit.edu 37 15 63944712 63944712 + Missense_Mutation SNP T G G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 HERPUD1 9709 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 56974151 56974151 + Missense_Mutation SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 HGF 3082 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 81346622 81346622 + Missense_Mutation SNP T T G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 IFNA21 3452 broad.mit.edu 37 9 21166125 21166125 + Missense_Mutation SNP C A A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 IFNAR1 3454 broad.mit.edu;hgsc.bcm.edu 37 21 34721421 34721421 + Silent SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 IL15 3600 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 142651079 142651079 + Missense_Mutation SNP T T G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 INO80 54617 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 41364204 41364204 + Missense_Mutation SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 KCNAB1 7881 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 156249255 156249255 + Missense_Mutation SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 KCND2 3751 broad.mit.edu;ucsc.edu 37 7 119914961 119914961 + Missense_Mutation SNP T C C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 KIAA0226 9711 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 197410178 197410178 + Silent SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 LCTL 197021 broad.mit.edu 37 15 66853375 66853375 + Missense_Mutation SNP C A A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 LOC644669 644669 broad.mit.edu 37 18 15323276 15323276 + RNA SNP A T T rs71354236 TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 LRP1 4035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 57589705 57589705 + Missense_Mutation SNP C C A rs148336699 alternate_allele TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 LTF 4057 hgsc.bcm.edu 37 3 46501284 46501285 + In_Frame_Ins INS - - CTT rs10662431 bycluster TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 MAP2K3 5606 hgsc.bcm.edu 37 17 21207813 21207813 + Missense_Mutation SNP T T G rs74575904 bycluster;byfrequency TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 MSLNL 401827 hgsc.bcm.edu 37 16 830748 830767 + Frame_Shift_Del DEL GTGTGCACGGGTAGGTGACG GTGTGCACGGGTAGGTGACG - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 GTGTGCACGGGTAGGTGACG GTGTGCACGGGTAGGTGACG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 MTOR 2475 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 11217303 11217303 + Missense_Mutation SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 MYOM2 9172 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 2020501 2020501 + Silent SNP G G A rs137913055 alternate_allele TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 MYOM3 127294 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 24434560 24434560 + Silent SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NCAPD3 23310 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 134029917 134029917 + Missense_Mutation SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NF1 4763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 29684022 29684022 + Missense_Mutation SNP A A G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A A G A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NOS1 4842 broad.mit.edu;ucsc.edu 37 12 117665305 117665305 + Missense_Mutation SNP T G G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NOTCH2 4853 hgsc.bcm.edu;ucsc.edu 37 1 120458462 120458463 + Frame_Shift_Ins INS - - TATA novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NPAS4 266743 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 66191067 66191067 + Missense_Mutation SNP T T G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NSUN6 221078 hgsc.bcm.edu;ucsc.edu 37 10 18874976 18874977 + Frame_Shift_Ins INS - - T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 NUDT4 11163 broad.mit.edu;hgsc.bcm.edu 37 12 93793101 93793101 + Silent SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ODZ1 0 hgsc.bcm.edu;ucsc.edu 37 X 124097394 124097394 + Frame_Shift_Del DEL G G - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 OR8B12 219858 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 124413531 124413531 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 OTX1 5013 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 63283120 63283120 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 OTX2 5015 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 57271023 57271023 + Silent SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 P2RY6 5031 broad.mit.edu 37 11 73008033 73008033 + Missense_Mutation SNP C A A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PCDHGA8 9708 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140773214 140773214 + Silent SNP A A G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PCNXL2 80003 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 233296143 233296143 + Missense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PER3 8863 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 7886603 7886603 + Nonsense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PEX2 5828 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 77896064 77896064 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PLA2G4F 255189 broad.mit.edu 37 15 42439928 42439928 + Silent SNP A C C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PM20D2 135293 hgsc.bcm.edu 37 6 89855893 89855893 + Missense_Mutation SNP A A C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PPP1R13B 23368 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 104208276 104208276 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PPP1R3D 5509 broad.mit.edu;hgsc.bcm.edu 37 20 58514505 58514505 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PRAMEF20 645425 broad.mit.edu 37 1 13743046 13743046 + Missense_Mutation SNP C A A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PRDM2 7799 hgsc.bcm.edu;ucsc.edu 37 1 14108935 14108935 + Frame_Shift_Del DEL T T - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 PRMT5 10419 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23393369 23393369 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RAB43 339122 broad.mit.edu;hgsc.bcm.edu 37 3 128813982 128813982 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RALGAPA1 253959 hgsc.bcm.edu 37 14 36096435 36096436 + Frame_Shift_Ins INS - - T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RASGEF1B 153020 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 82380577 82380577 + Missense_Mutation SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RNF103 7844 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 86831681 86831681 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RNF10 9921 broad.mit.edu;ucsc.edu 37 12 121013684 121013684 + Missense_Mutation SNP T C C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RNF169 254225 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 74546695 74546695 + Silent SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 RRP9 9136 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 51971260 51971260 + Silent SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SCARB2 950 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 77082897 77082897 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SEC16A 9919 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 139360547 139360547 + Nonsense_Mutation SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SERAC1 84947 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 158541585 158541585 + Silent SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SFI1 9814 hgsc.bcm.edu;ucsc.edu 37 22 31927108 31927108 + Frame_Shift_Del DEL A A - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SIPA1L2 57568 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 232650976 232650976 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SLC12A5 57468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 44684805 44684805 + Missense_Mutation SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SLC47A2 146802 broad.mit.edu;hgsc.bcm.edu 37 17 19582221 19582221 + Splice_Site SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SLCO4C1 353189 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 101631681 101631681 + Nonsense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SLTM 79811 hgsc.bcm.edu;ucsc.edu 37 15 59205785 59205786 + Frame_Shift_Del DEL TA TA - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 TA TA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SMAD2 4087 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 45395769 45395769 + Missense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SOCS6 9306 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 67992983 67992983 + Missense_Mutation SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SORL1 6653 hgsc.bcm.edu 37 11 121416109 121416109 + Missense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SP100 6672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 231407658 231407658 + Missense_Mutation SNP T T G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SPOCK1 6695 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 136328254 136328254 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SRA1 10011 hgsc.bcm.edu 37 5 139931629 139931629 + Missense_Mutation SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 STK33 65975 hgsc.bcm.edu 37 11 8414087 8414088 + In_Frame_Ins INS - - CCAGAA novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 SYDE1 85360 hgsc.bcm.edu;ucsc.edu 37 19 15224541 15224561 + In_Frame_Del DEL GGGCGGGACTTCCTGCCCTGT GGGCGGGACTTCCTGCCCTGT - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 GGGCGGGACTTCCTGCCCTGT GGGCGGGACTTCCTGCCCTGT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TBC1D8B 54885 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 106109183 106109183 + Nonsense_Mutation SNP C C G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TBL2 26608 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 72985071 72985071 + Silent SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TH 7054 hgsc.bcm.edu;ucsc.edu 37 11 2185540 2185540 + Frame_Shift_Del DEL G G - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TMEM92 162461 broad.mit.edu;hgsc.bcm.edu 37 17 48356271 48356271 + Missense_Mutation SNP T T A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TP53I13 90313 broad.mit.edu;hgsc.bcm.edu 37 17 27896080 27896080 + Silent SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TPCN1 53373 broad.mit.edu;ucsc.edu 37 12 113727990 113727990 + Silent SNP C A A rs150639944 alternate_allele TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TSC22D1 8848 hgsc.bcm.edu 37 13 45008837 45008838 + Frame_Shift_Ins INS - - G novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179613182 179613182 + Frame_Shift_Del DEL T T - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 TULP1 7287 broad.mit.edu;hgsc.bcm.edu 37 6 35471404 35471404 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 UNC13B 10497 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 35396577 35396577 + Missense_Mutation SNP G G C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 Unknown 0 broad.mit.edu 37 19 52196178 52196178 + RNA SNP C T T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 USP7 7874 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 9010986 9010986 + Missense_Mutation SNP C C T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 UTRN 7402 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 144768773 144768773 + Silent SNP A A T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10191571 10191571 + Silent SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10191572 10191572 + Nonsense_Mutation SNP G G T novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZFR2 23217 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 3813874 3813874 + Frame_Shift_Del DEL T T - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZNF354C 30832 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 178506605 178506605 + Missense_Mutation SNP G G A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZNF407 55628 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 72346444 72346444 + Missense_Mutation SNP A A C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZNF423 23090 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 49557609 49557609 + Missense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZNF658 26149 broad.mit.edu 37 9 40772272 40772272 + Frame_Shift_Del DEL T - - novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZNF703 80139 broad.mit.edu;hgsc.bcm.edu 37 8 37556057 37556057 + Missense_Mutation SNP C C A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZNF862 643641 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 149559035 149559035 + Missense_Mutation SNP T T C novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114 ZRANB1 54764 hgsc.bcm.edu 37 10 126673560 126673561 + Frame_Shift_Ins INS - - A novel TCGA-BP-5176-01A-01D-1429-08 TCGA-BP-5176-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 607eb48b-1647-4e35-ac60-f6c50341e304 b4effa58-b677-4f97-9653-38ca864a9114