Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID A2BP1 0 broad.mit.edu 37 16 7703894 7703894 + Missense_Mutation SNP G A A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 ABCA13 154664 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 48556330 48556330 + Silent SNP T T A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 ACR 49 broad.mit.edu;hgsc.bcm.edu 37 22 51178394 51178394 + Missense_Mutation SNP T T C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 ADH1B 125 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 100239948 100239948 + Silent SNP G G C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 APOBEC3D 140564 hgsc.bcm.edu 37 22 39421110 39421112 + In_Frame_Del DEL CTT CTT - novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 CTT CTT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 AQR 9716 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 35149171 35149171 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 ATF6B 1388 broad.mit.edu 37 6 32095464 32095464 + Missense_Mutation SNP G C C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 BRD8 10902 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 137502346 137502346 + Silent SNP A A T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CCNA1 8900 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 37014312 37014312 + Silent SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CENPC1 1060 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 68380078 68380078 + Silent SNP A A G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CNKSR3 154043 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 154743778 154743778 + Nonsense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CNOT4 4850 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 135080392 135080392 + Missense_Mutation SNP T T C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CNTN5 53942 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 99942549 99942549 + Missense_Mutation SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 COL25A1 84570 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 109783657 109783657 + Silent SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CTCFL 140690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 56089655 56089655 + Silent SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CTNND1 1500 broad.mit.edu;ucsc.edu 37 11 57573944 57573944 + Missense_Mutation SNP T C C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 DMXL1 1657 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 118484562 118484562 + Missense_Mutation SNP A A G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 DRD5 1816 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 9784913 9784913 + Silent SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 DTNBP1 84062 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 15627643 15627643 + Nonsense_Mutation SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 EXTL1 2134 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 26357724 26357724 + Silent SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 FAM135B 51059 hgsc.bcm.edu 37 8 139165459 139165459 + Missense_Mutation SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 FAT2 2196 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 150925180 150925180 + Missense_Mutation SNP G G C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 FLJ36000 284124 broad.mit.edu 37 17 21904083 21904083 + RNA SNP C A A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 FLRT2 23768 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 86089519 86089519 + Missense_Mutation SNP T T C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 GCC2 9648 broad.mit.edu;hgsc.bcm.edu 37 2 109113518 109113518 + Missense_Mutation SNP C C G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 GNL3L 54552 broad.mit.edu;hgsc.bcm.edu 37 X 54585053 54585053 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 IGSF11 152404 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 118621704 118621704 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 JRKL 8690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 96124831 96124831 + Missense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 KIAA2018 205717 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 113374665 113374665 + Missense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 LAMC3 10319 broad.mit.edu;hgsc.bcm.edu 37 9 133911651 133911651 + Missense_Mutation SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 LILRB4 11006 hgsc.bcm.edu 37 19 55179244 55179244 + Frame_Shift_Del DEL G G - novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 LOXL1 4016 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 74239485 74239485 + Missense_Mutation SNP A A G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 LRGUK 136332 hgsc.bcm.edu;ucsc.edu 37 7 133848194 133848198 + Frame_Shift_Del DEL GCCCT GCCCT - novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 GCCCT GCCCT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 MAP3K4 4216 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 161513128 161513128 + Missense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 MAU2 23383 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 19459978 19459978 + Missense_Mutation SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 MTSS1 9788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 125565825 125565825 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 MTUS2 23281 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 29599346 29599346 + Nonsense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 MYST2 0 broad.mit.edu;hgsc.bcm.edu 37 17 47895315 47895315 + Missense_Mutation SNP A A G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 NAP1L3 4675 hgsc.bcm.edu 37 X 92928035 92928036 + Frame_Shift_Ins INS - - C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 NEURL 9148 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 105330649 105330649 + Missense_Mutation SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 NPNT 255743 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 106819134 106819134 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C C T C C Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 OAS1 4938 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 113346530 113346530 + Missense_Mutation SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 OSBPL5 114879 broad.mit.edu 37 11 3109495 3109495 + Silent SNP G A A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PABPC1 26986 broad.mit.edu;hgsc.bcm.edu 37 8 101719135 101719135 + Missense_Mutation SNP A A T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PAH 5053 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 103240687 103240687 + Nonsense_Mutation SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PIK3C3 5289 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 39567803 39567803 + Missense_Mutation SNP A A T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PIP5K1C 23396 broad.mit.edu;hgsc.bcm.edu 37 19 3651895 3651895 + Silent SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PLEKHH2 130271 hgsc.bcm.edu;ucsc.edu 37 2 43939458 43939458 + Frame_Shift_Del DEL A A - novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PLEKHM2 23207 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 16058448 16058448 + Missense_Mutation SNP A A C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PPFIBP2 8495 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 7663540 7663540 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PREX1 57580 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 47258752 47258752 + Silent SNP C C A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PSKH2 85481 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 87060713 87060713 + Nonsense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PTPRN2 5799 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 157985057 157985057 + Missense_Mutation SNP C C T rs137877535 bycluster;by1000genomes TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 PTPRS 5802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 5219380 5219380 + Silent SNP C C G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 RPL18 6141 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 49119434 49119434 + Missense_Mutation SNP C C T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 RYR3 6263 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 34137144 34137144 + Missense_Mutation SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 S1PR4 8698 broad.mit.edu 37 19 3179921 3179921 + Missense_Mutation SNP C A A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 STK10 6793 broad.mit.edu;hgsc.bcm.edu 37 5 171481605 171481605 + Missense_Mutation SNP C C G novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 STRN3 29966 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 31376115 31376115 + Nonsense_Mutation SNP A A T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 STT3B 201595 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 31658488 31658488 + Missense_Mutation SNP G G C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 SULT4A1 25830 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 44237743 44237743 + Missense_Mutation SNP A A C novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 TAS1R3 83756 broad.mit.edu;hgsc.bcm.edu 37 1 1267928 1267928 + Silent SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 THSD7B 80731 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 138033572 138033572 + Missense_Mutation SNP T T A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 TTN 7273 broad.mit.edu;hgsc.bcm.edu 37 2 179558720 179558720 + Missense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 UBE3C 9690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 157049683 157049683 + Missense_Mutation SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 Unknown 0 broad.mit.edu 37 15 84946555 84946556 + RNA INS - TT TT rs71453238 TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 ZC3H18 124245 broad.mit.edu;hgsc.bcm.edu 37 16 88697620 88697620 + Silent SNP G G A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 ZCCHC9 84240 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 80600797 80600797 + Missense_Mutation SNP G G T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 MTOR 2475 broad.mit.edu 37 1 11217230 11217230 + Missense_Mutation SNP C A A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 EPHA8 2046 broad.mit.edu 37 1 22902868 22902868 + Silent SNP C T T novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236 CSMD1 64478 broad.mit.edu 37 8 3216686 3216686 + Missense_Mutation SNP G A A novel TCGA-CJ-4907-01A-01D-1429-08 TCGA-CJ-4907-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 . . Illumina GAIIx 7c69fcb9-4b94-478a-bcb3-6ebd162d9482 37409a95-7e2f-42ee-ad41-b3f5b32c7236