Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACD 65057 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 67692130 67692130 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ADAMTS20 80070 broad.mit.edu 37 12 43822466 43822466 + Missense_Mutation SNP C A A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ATP11A 23250 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 113485756 113485756 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 BRS3 680 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 135570317 135570317 + Nonsense_Mutation SNP C C A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 C14orf169 79697 hgsc.bcm.edu 37 14 73957981 73957982 + Frame_Shift_Ins INS - - C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 CAPN3 825 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 42652148 42652148 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 CD1C 911 hgsc.bcm.edu;ucsc.edu 37 1 158262061 158262061 + Silent SNP C C T rs142044323 bycluster;byfrequency;by1000genomes TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 CHIA 27159 broad.mit.edu;hgsc.bcm.edu 37 1 111857933 111857933 + Missense_Mutation SNP T T C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 CRTAC1 55118 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 99640010 99640010 + Silent SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 CTNNA2 1496 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 80782891 80782891 + Silent SNP G G T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 DCAF8L1 139425 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 27997690 27997690 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 DCLRE1B 64858 broad.mit.edu;hgsc.bcm.edu 37 1 114454408 114454408 + Missense_Mutation SNP G G C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 DIP2C 22982 broad.mit.edu;hgsc.bcm.edu 37 10 332271 332271 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 DNAH6 1768 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 84780110 84780110 + Missense_Mutation SNP G G C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 EPN1 29924 broad.mit.edu 37 19 56204133 56204133 + Missense_Mutation SNP C G G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 FAM5C 339479 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 190068174 190068174 + Silent SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 FCGBP 8857 broad.mit.edu 37 19 40367841 40367841 + Silent SNP T G G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 FCRL1 115350 broad.mit.edu 37 1 157789883 157789883 + Translation_Start_Site SNP C T T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 FRMPD1 22844 broad.mit.edu;ucsc.edu 37 9 37733482 37733482 + Silent SNP A G G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 GDA 9615 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 74863196 74863196 + Missense_Mutation SNP C C G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 GFPT2 9945 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 179745870 179745870 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 HMOX1 3162 broad.mit.edu 37 22 35785885 35785885 + Missense_Mutation SNP C A A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 HTR4 3360 hgsc.bcm.edu 37 5 147889404 147889404 + Missense_Mutation SNP G G A rs140360260 bycluster;byfrequency;by1000genomes TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 IARS2 55699 broad.mit.edu 37 1 220318982 220318982 + Silent SNP C T T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 IFNA16 3449 broad.mit.edu 37 9 21217253 21217253 + Missense_Mutation SNP A C C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 KIF18A 81930 hgsc.bcm.edu;ucsc.edu 37 11 28058129 28058129 + Frame_Shift_Del DEL T T - novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 KIF2A 3796 broad.mit.edu 37 5 61649100 61649100 + Splice_Site SNP A G G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 LYST 1130 hgsc.bcm.edu;ucsc.edu 37 1 235950642 235950643 + Frame_Shift_Ins INS - - T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 MANEA 79694 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 96053676 96053676 + Missense_Mutation SNP C C G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 MAP3K10 4294 broad.mit.edu 37 19 40720964 40720964 + Missense_Mutation SNP G T T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 MIR1298 100302153 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 113949683 113949683 + RNA SNP G G T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 MMP14 4323 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23310798 23310798 + Missense_Mutation SNP G G T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 MTERFD1 51001 broad.mit.edu 37 8 97258647 97258647 + Missense_Mutation SNP G A A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 NFE2L1 4779 broad.mit.edu;ucsc.edu 37 17 46128663 46128663 + Silent SNP C A A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 NHEDC1 0 hgsc.bcm.edu 37 4 103822483 103822484 + Frame_Shift_Del DEL AC AC - novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 AC AC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 NRBP2 340371 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 144920929 144920929 + Nonsense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 OR10G7 390265 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 123908892 123908892 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 OR10K2 391107 broad.mit.edu;hgsc.bcm.edu 37 1 158390417 158390417 + Missense_Mutation SNP C C A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 OR5L1 219437 broad.mit.edu;hgsc.bcm.edu 37 11 55579228 55579228 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 OR5W2 390148 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 55681565 55681565 + Missense_Mutation SNP C C T rs148084259 TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PCDH10 57575 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 134071474 134071474 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PCDHGC4 56098 broad.mit.edu;hgsc.bcm.edu 37 5 140865503 140865503 + Missense_Mutation SNP G G T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PDXDC1 23042 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 15129348 15129348 + Missense_Mutation SNP A A G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PI16 221476 broad.mit.edu;ucsc.edu 37 6 36922579 36922579 + Silent SNP C T T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PLAUR 5329 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 44160640 44160640 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PLXNA1 5361 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 126708047 126708047 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PPIL4 85313 broad.mit.edu;hgsc.bcm.edu 37 6 149855873 149855873 + Missense_Mutation SNP C C T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PROC 5624 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128185973 128185973 + Missense_Mutation SNP C C A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PRSS38 339501 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 228004909 228004909 + Splice_Site SNP G G T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 PTPRT 11122 hgsc.bcm.edu;ucsc.edu 37 20 40727124 40727137 + Frame_Shift_Del DEL CCAGAAGTCTGCCA CCAGAAGTCTGCCA - novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 CCAGAAGTCTGCCA CCAGAAGTCTGCCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 QSER1 79832 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 32953488 32953488 + Missense_Mutation SNP G G C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 SLC35A1 10559 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 88218885 88218885 + Missense_Mutation SNP T T C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 SLIT3 6586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 168093623 168093623 + Missense_Mutation SNP C C G novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 SOD2 6648 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 160113748 160113748 + Silent SNP G G T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 SPEG 10290 broad.mit.edu 37 2 220338227 220338227 + Silent SNP C A A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ST7L 54879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 113124710 113124710 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ST7L 54879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 113124711 113124711 + Silent SNP A A T novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 STK31 56164 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 23826468 23826468 + Missense_Mutation SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 TEKT5 146279 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 10788652 10788652 + Missense_Mutation SNP C C A rs61731533 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 Unknown 0 broad.mit.edu 37 15 28929547 28929547 + RNA SNP T C C rs4401014 bycluster TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 Unknown 0 broad.mit.edu 37 15 82620400 82620400 + RNA SNP T C C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ZC3H3 23144 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 144550433 144550433 + Silent SNP G G C novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ZMIZ2 83637 broad.mit.edu;hgsc.bcm.edu 37 7 44796728 44796728 + Silent SNP G G A novel TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331 ZNF626 199777 hgsc.bcm.edu 37 19 20807177 20807178 + Frame_Shift_Ins INS - - A rs35575803 TCGA-CJ-6028-01A-11D-1669-08 TCGA-CJ-6028-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq d165717a-cc3d-4533-8194-0029c186f1bb ade34839-33d1-4347-ad43-a32da7584331