Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACTL9 284382 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 8807902 8807902 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ADAMTS7 11173 broad.mit.edu 37 15 79090324 79090324 + Silent SNP A C C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 AGBL1 123624 broad.mit.edu;ucsc.edu 37 15 87066159 87066159 + Silent SNP C A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 AGRN 375790 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 985343 985343 + Missense_Mutation SNP C C A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 AMBRA1 55626 hgsc.bcm.edu;ucsc.edu 37 11 46439573 46439574 + Frame_Shift_Del DEL AG AG - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ANK3 288 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 62039296 62039296 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ANKRD11 29123 broad.mit.edu 37 16 89345631 89345631 + Missense_Mutation SNP T G G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 AP3M1 26985 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 75884279 75884279 + Silent SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 APOB48R 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 28508786 28508786 + Silent SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 APOH 350 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 64222147 64222147 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 AQP7 364 hgsc.bcm.edu 37 9 33395103 33395103 + Silent SNP G G A rs148012859 byfrequency TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ARHGAP5 394 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 32619205 32619205 + Silent SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ATXN2 6311 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 111893890 111893890 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ATXN2 6311 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 111893891 111893891 + Missense_Mutation SNP T T A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 BIN3 55909 broad.mit.edu 37 8 22479026 22479026 + Missense_Mutation SNP T G G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 BRD2 6046 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 32942463 32942463 + Missense_Mutation SNP T T C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 BRE 9577 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 28467670 28467670 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 C12orf26 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 82796821 82796821 + Missense_Mutation SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 C12orf43 64897 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 121442228 121442228 + Missense_Mutation SNP G G C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 C12orf56 115749 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 64671569 64671569 + Missense_Mutation SNP T T C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 C14orf93 60686 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23458974 23458974 + Missense_Mutation SNP T T A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 C16orf70 80262 broad.mit.edu;ucsc.edu 37 16 67166430 67166430 + Splice_Site SNP T G G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 C3orf57 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 161064028 161064028 + Silent SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CASQ1 844 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 160167357 160167357 + Splice_Site SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CCDC17 149483 broad.mit.edu;ucsc.edu 37 1 46087629 46087629 + Frame_Shift_Del DEL G - - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CD1D 912 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 158152008 158152008 + Missense_Mutation SNP C C A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CD200 4345 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 112059811 112059811 + Silent SNP G G C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CDC25C 995 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 137621758 137621758 + Silent SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CELSR2 1952 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 109805009 109805009 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CELSR2 1952 hgsc.bcm.edu 37 1 109792735 109792736 + In_Frame_Ins INS - - CGC novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CHRM3 1131 broad.mit.edu;hgsc.bcm.edu 37 1 240071728 240071728 + Missense_Mutation SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CLCN2 1181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 184079226 184079226 + Silent SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CLCN5 1184 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 49851500 49851500 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CUL7 9820 broad.mit.edu 37 6 43013037 43013037 + Missense_Mutation SNP T C C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CXorf22 170063 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 35974189 35974189 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 CYBASC3 220002 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 61120499 61120499 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 DENND1A 57706 broad.mit.edu 37 9 126144388 126144388 + Missense_Mutation SNP G A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 DENND2A 27147 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 140301525 140301525 + Missense_Mutation SNP T T C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 DLGAP5 9787 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 55655785 55655785 + Missense_Mutation SNP T T C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 EME2 197342 broad.mit.edu 37 16 1825568 1825568 + Splice_Site SNP A C C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 EP400 57634 broad.mit.edu 37 12 132547138 132547138 + Silent SNP A G G rs111782215 bycluster;byfrequency TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ERBB4 2066 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 212252692 212252692 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 EVI5 7813 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 93163497 93163497 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 EXD3 54932 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 140249170 140249170 + Nonsense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FAM123C 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 131520963 131520963 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FAM166B 730112 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 35562911 35562911 + Missense_Mutation SNP C C A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FAM38B 0 broad.mit.edu;hgsc.bcm.edu 37 18 10697808 10697808 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FAT3 120114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 92543049 92543049 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FERMT3 83706 hgsc.bcm.edu;ucsc.edu 37 11 63990606 63990607 + Frame_Shift_Del DEL AG AG - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FMNL3 91010 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 50050231 50050231 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 FZR1 51343 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 3523035 3523035 + Missense_Mutation SNP G G C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 GIMAP8 155038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 150174244 150174244 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 GTSE1 51512 hgsc.bcm.edu;ucsc.edu 37 22 46725272 46725272 + Frame_Shift_Del DEL C C - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 H1FX 8971 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 129034182 129034182 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 HECW2 57520 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 197184155 197184155 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 HPS5 11234 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 18314494 18314494 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 IL31 386653 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 122656992 122656992 + Silent SNP T T C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 JUB 0 hgsc.bcm.edu;ucsc.edu 37 14 23444054 23444054 + Frame_Shift_Del DEL G G - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 KIAA1217 56243 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 24669919 24669919 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 KIAA1704 55425 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 45589098 45589098 + Missense_Mutation SNP C C A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 KIF14 9928 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 200587653 200587653 + Missense_Mutation SNP A A T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 KIRREL 55243 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 158057581 158057581 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 LAMA1 284217 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 7036007 7036007 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 LIMS2 55679 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128414990 128414990 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 LOC100133050 100133050 broad.mit.edu 37 5 99715528 99715528 + RNA SNP C T T rs71636707 TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 LTBP1 4052 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 33413692 33413692 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MACF1 23499 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 39909151 39909151 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MAGEC1 9947 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 140994794 140994794 + Missense_Mutation SNP G G C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MANSC1 54682 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 12483626 12483626 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MAP3K4 4216 broad.mit.edu;hgsc.bcm.edu 37 6 161507426 161507426 + Silent SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MAP3K4 4216 broad.mit.edu;hgsc.bcm.edu 37 6 161507427 161507427 + Missense_Mutation SNP A A T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MAP3K4 4216 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 161470927 161470927 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MAPK13 5603 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 36103575 36103575 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MAST3 23031 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 18255405 18255405 + Missense_Mutation SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MIR593 693178 broad.mit.edu;ucsc.edu 37 7 127721977 127721977 + RNA SNP A G G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MMP10 4319 hgsc.bcm.edu;ucsc.edu 37 11 102650395 102650395 + Frame_Shift_Del DEL T T - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MRE11A 4361 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 94219122 94219122 + Silent SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MYH4 4622 hgsc.bcm.edu;ucsc.edu 37 17 10356638 10356638 + Frame_Shift_Del DEL T T - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 MYO18B 84700 broad.mit.edu;hgsc.bcm.edu 37 22 26164741 26164741 + Silent SNP A A T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NAPRT1 93100 hgsc.bcm.edu;ucsc.edu 37 8 144657613 144657613 + Frame_Shift_Del DEL A A - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NEDD4 4734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 56208025 56208025 + Silent SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NEURL4 84461 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7224466 7224466 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NFAT5 10725 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 69681465 69681465 + Missense_Mutation SNP A A T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NOM1 64434 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 156752790 156752790 + Silent SNP T T G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NRD1 4898 broad.mit.edu;ucsc.edu 37 1 52287168 52287169 + Splice_Site INS - C C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 NUDT10 170685 broad.mit.edu;hgsc.bcm.edu 37 X 51075924 51075924 + Missense_Mutation SNP T T C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 OR6C2 341416 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 55846275 55846275 + Missense_Mutation SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 OR8G5 219865 broad.mit.edu;hgsc.bcm.edu 37 11 124135620 124135620 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52682459 52682459 + Splice_Site SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PIK3C2A 5286 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 17118795 17118795 + Silent SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PLCG1 5335 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 39796506 39796506 + Silent SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PLEKHA2 59339 broad.mit.edu 37 8 38827144 38827144 + Nonsense_Mutation SNP C A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PLS1 5357 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 142430381 142430381 + Missense_Mutation SNP A A T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PODXL 5420 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 131191353 131191353 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 POLG 5428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 89869918 89869918 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 POLR1E 64425 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 37500907 37500907 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PPAP2B 8613 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 57044640 57044640 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PPM1E 22843 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 57057344 57057344 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 PSMA3 5684 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 58714515 58714515 + Silent SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 RANBP2 5903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 109357073 109357073 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 RASSF3 283349 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 65085342 65085342 + Missense_Mutation SNP G G C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 REG3G 130120 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 79255386 79255386 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ROBO2 6092 broad.mit.edu 37 3 77147239 77147239 + Missense_Mutation SNP G A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SDK1 221935 broad.mit.edu;ucsc.edu 37 7 4198097 4198097 + Missense_Mutation SNP C A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SENP7 57337 hgsc.bcm.edu;ucsc.edu 37 3 101090968 101090968 + Frame_Shift_Del DEL C C - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SLC17A7 57030 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 49934326 49934326 + Silent SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SLC44A1 23446 hgsc.bcm.edu;ucsc.edu 37 9 108127774 108127774 + Frame_Shift_Del DEL A A - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SMEK2 57223 hgsc.bcm.edu;ucsc.edu 37 2 55813839 55813840 + Frame_Shift_Ins INS - - A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SNAI2 6591 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 49832751 49832751 + Missense_Mutation SNP T T A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SNX18 112574 broad.mit.edu;hgsc.bcm.edu 37 5 53839239 53839239 + Missense_Mutation SNP C C A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SORCS3 22986 broad.mit.edu;ucsc.edu 37 10 107016626 107016626 + Missense_Mutation SNP G A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SPRYD5 0 broad.mit.edu 37 11 55653105 55653105 + Missense_Mutation SNP C A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SPRYD5 0 broad.mit.edu;hgsc.bcm.edu 37 11 55658689 55658689 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 SULF2 55959 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 46365503 46365503 + Missense_Mutation SNP G G T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 TAB2 23118 hgsc.bcm.edu;ucsc.edu 37 6 149699871 149699872 + Frame_Shift_Ins INS - - T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 TECTA 7007 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 120980198 120980198 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 THEG 51298 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 375847 375847 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 TP53BP2 7159 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 223983955 223983955 + Silent SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179425394 179425394 + Missense_Mutation SNP C C G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179426804 179426804 + Missense_Mutation SNP A A T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 Unknown 0 broad.mit.edu 37 16 16465472 16465472 + Silent SNP T C C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10188224 10188224 + Frame_Shift_Del DEL G G - novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 WDR55 54853 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140049085 140049085 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 XIRP2 129446 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 168104885 168104885 + Missense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 XRN1 54464 broad.mit.edu 37 3 142031463 142031463 + Missense_Mutation SNP G A A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZFHX3 463 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 72991477 72991477 + Silent SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZFP14 57677 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 36831956 36831956 + Missense_Mutation SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZFYVE27 118813 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 99509236 99509236 + Missense_Mutation SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZNF131 7690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 43161423 43161423 + Silent SNP A A G novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZNF202 7753 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 123598248 123598248 + Nonsense_Mutation SNP C C T novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZNF710 374655 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 90616318 90616318 + Missense_Mutation SNP A A C novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123 ZYX 7791 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 143079761 143079761 + Missense_Mutation SNP G G A novel TCGA-CW-6093-01A-11D-1669-08 TCGA-CW-6093-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 9b1beb37-1ed7-43c0-a532-56df7941111f e75e7a34-73fd-425d-9dcd-db99f862d123