Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS16 170690 broad.mit.edu;ucsc.edu 37 5 5242262 5242262 + Missense_Mutation SNP T A A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f AHNAK 79026 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 62296732 62296732 + Missense_Mutation SNP C C A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f ATP1A1 476 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 116932958 116932958 + Missense_Mutation SNP C C A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f C12orf11 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 27075598 27075598 + Silent SNP A A G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f CBX1 10951 broad.mit.edu;hgsc.bcm.edu 37 17 46148933 46148933 + Missense_Mutation SNP G G A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f CEP152 22995 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 49048532 49048532 + Missense_Mutation SNP G G C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f COL6A5 256076 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 130098768 130098768 + Missense_Mutation SNP C C T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f CRTC1 23373 broad.mit.edu 37 19 18856654 18856654 + Silent SNP C T T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f CTSH 1512 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 79227327 79227327 + Missense_Mutation SNP T T A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f DMXL1 1657 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 118502425 118502425 + Silent SNP A A G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f ENPP5 59084 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 46133254 46133254 + Silent SNP A A G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f EPHB6 2051 broad.mit.edu 37 7 142562259 142562259 + Frame_Shift_Del DEL C - - novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f FAM175B 23172 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 126523420 126523420 + Silent SNP T T C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f FAM180A 389558 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 135433271 135433271 + Missense_Mutation SNP A A T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f FAM180A 389558 broad.mit.edu;ucsc.edu 37 7 135433272 135433272 + Missense_Mutation SNP C A A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f FAT1 2195 broad.mit.edu;ucsc.edu 37 4 187629281 187629281 + Silent SNP A C C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f GLB1L 79411 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 220101846 220101846 + Missense_Mutation SNP A A G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f GLG1 2734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 74524933 74524933 + Missense_Mutation SNP T T A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f IQCF2 389123 broad.mit.edu;ucsc.edu 37 3 51897084 51897084 + Missense_Mutation SNP C A A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f KBTBD2 25948 broad.mit.edu;ucsc.edu 37 7 32909724 32909724 + Missense_Mutation SNP C T T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f KLHL5 51088 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 39083717 39083717 + Missense_Mutation SNP C C G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f LY75-CD302 100526664 hgsc.bcm.edu;ucsc.edu 37 2 160721395 160721395 + Frame_Shift_Del DEL C C - novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f MIR125B1 406911 broad.mit.edu 37 11 121970479 121970479 + RNA SNP C A A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f MTMR4 9110 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 56573389 56573389 + Missense_Mutation SNP A A T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f MUC16 94025 broad.mit.edu;ucsc.edu 37 19 9046549 9046549 + Silent SNP A G G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f MYCL1 4610 broad.mit.edu;hgsc.bcm.edu 37 1 40363317 40363317 + Missense_Mutation SNP A A C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f NOM1 64434 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 156761876 156761876 + Missense_Mutation SNP T T G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f NOX1 27035 broad.mit.edu;ucsc.edu 37 X 100105317 100105317 + Missense_Mutation SNP A T T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f OPRD1 4985 broad.mit.edu 37 1 29185486 29185486 + Missense_Mutation SNP C A A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f ORC1 4998 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 52849596 52849596 + Missense_Mutation SNP T T C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f PALMD 54873 broad.mit.edu;ucsc.edu 37 1 100155420 100155420 + Missense_Mutation SNP C T T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f PFKFB3 5209 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 6268194 6268194 + Missense_Mutation SNP A A T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f PKN2 5586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 89271212 89271212 + Missense_Mutation SNP A A G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f RRAD 6236 broad.mit.edu 37 16 66956073 66956073 + Missense_Mutation SNP G T T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f SBDSP1 155370 broad.mit.edu 37 7 72307377 72307377 + RNA SNP C G G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f SLC19A2 10560 hgsc.bcm.edu;ucsc.edu 37 1 169437458 169437458 + Frame_Shift_Del DEL C C - novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f SLC38A8 146167 broad.mit.edu 37 16 84050801 84050801 + Silent SNP C A A novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f SLC39A10 57181 hgsc.bcm.edu;ucsc.edu 37 2 196545001 196545001 + Frame_Shift_Del DEL T T - novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f SLC47A1 55244 hgsc.bcm.edu;ucsc.edu 37 17 19451355 19451355 + Missense_Mutation SNP G G T rs150632967 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f SUCLG1 8802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 84660489 84660489 + Silent SNP C C T novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f TMEM198 130612 broad.mit.edu 37 2 220413932 220413932 + Missense_Mutation SNP T G G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f TNNI3K 51086 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 74954920 74954920 + Silent SNP C C G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f TNR 7143 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 175348829 175348829 + Missense_Mutation SNP T T C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f TRUB2 26995 broad.mit.edu 37 9 131083994 131083994 + Missense_Mutation SNP T C C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f TUSC3 7991 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 15480643 15480643 + Missense_Mutation SNP A A C rs11545035 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f UHRF1 29128 broad.mit.edu 37 19 4941811 4941811 + Frame_Shift_Del DEL G - - novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f UNC5A 90249 broad.mit.edu 37 5 176297519 176297519 + Silent SNP T C C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f Unknown 0 broad.mit.edu 37 15 28913498 28913498 + RNA SNP T G G novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f XIRP2 129446 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 167992508 167992508 + Missense_Mutation SNP G G C novel TCGA-CZ-4863-01A-01D-1501-10 TCGA-CZ-4863-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4286d73b-1fb9-41a3-baba-46f23100586a 1b3a35ca-6f5c-41e2-95ab-f90ff0fcec8f