Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
SNIP1	79753	ucsc.edu	37	1	38019775	38019775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	SNIP1-227	NM_024700	exon1	c.G56T	p.G19V	ACGTCCCCGTCCC	.	55	5	84	0	.	0	0	0	0	0
ZNF684	127396	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	41012446	41012446	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	ZNF684-90	NM_152373	exon5	c.A451G	p.R151G	TATAATAGAAGTT	.	50	35	40	0	.	0	0	0	0	0
FPGT-TNNI3K	100526835	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	74905226	74905226	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	.	NM_001199327	exon22	c.T2234G	p.I745S	ACACCATCAAAGC	.	70	26	87	0	.	2	2	0	0	0
GBP7	388646	hgsc.bcm.edu	37	1	89598981	89598981	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	GBP7-92	NM_207398	exon10	c.A1622T	p.Y541F	CTCATATAGTTTT	.	117	7	152	1	.	0	0	0	0	0
AMPD1	270	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	115218255	115218255	+	Silent	SNP	G	G	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	AMPD1-293	NM_000036	exon12	c.C1674G	p.S558S	ACTCTTGGAGGAG	.	150	44	173	0	.	0	0	0	0	0
TDRD5	163589	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	179609042	179609042	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	TDRD5-94	NM_173533	exon10	c.A1589C	p.H530P	CGGGACATCTCTG	.	325	51	207	0	.	0	0	0	0	0
C11orf70	85016	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	101937281	101937281	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	C11orf70-91	NM_032930	exon4	c.C334G	p.H112D	TTTTTTCATCGGT	.	66	37	72	0	.	13	2	11	0	0
GYS2	2998	broad.mit.edu	37	12	21728873	21728873	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	GYS2-523	NM_021957	exon3	c.G422A	p.G141D	GGAATGCCGACAC	.	152	5	92	0	.	0	0	0	0	0
FAR2	55711	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	29485566	29485566	+	Silent	SNP	T	T	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	FAR2-90	NM_018099	exon11	c.T1291C	p.L431L	AACTGGTTGGAAT	.	102	45	49	0	.	9	8	1	0	0
TRHDE	29953	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	72680574	72680574	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	TRHDE-93	NM_013381	exon2	c.A893G	p.Y298C	CAACCTATTTATC	.	274	103	155	1	.	20	13	7	0	0
LRRIQ1	84125	bcgsc.ca	37	12	85441091	85441091	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	LRRIQ1-95	NM_001079910	exon6	c.G521T	p.W174L	AGGCTTGGCAAGA	.	204	13	120	1	.	0	0	0	0	0
OR11G2	390439	broad.mit.edu	37	14	20666485	20666485	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	OR11G2-70	NM_001005503	exon1	c.A991G	p.R331G	AGTCTTAGGAACA	.	157	5	171	0	.	0	0	0	0	0
TVP23C	201158	ucsc.edu	37	17	15457087	15457087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	.	NM_145301	exon3	c.G152A	p.C51Y	AGAAGACAGACGA	.	535	83	324	52	.	97	2	95	0	0
RNF213	57674	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	78355391	78355391	+	Silent	SNP	C	C	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	RNF213-577	NM_001256071	exon57	c.C13842G	p.G4614G	AAAAGGCTTTCTG	.	182	99	97	0	.	41	20	21	0	0
RPRD1A	55197	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	33606995	33606995	+	Silent	SNP	C	C	T	rs202026701		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	RPRD1A-154	NM_018170	exon6	c.G657A	p.A219A	CATACACGCATCC	.	73	45	103	0	C|0.999;T|0.001	11	3	8	0	0
MED16	10025	hgsc.bcm.edu	37	19	879943	879943	+	Missense_Mutation	SNP	G	G	C	rs76403059		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	MED16-186	NM_005481	exon8	c.C1347G	p.H449Q	CTTCCCGTGGCTG	.	18	3	34	1	.	0	0	0	0	0
FCGBP	8857	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	40408648	40408648	+	Silent	SNP	G	G	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	FCGBP-98	NM_003890	exon8	c.C4191G	p.P1397P	ATCCTTGGGGTCG	.	116	34	165	0	.	27	26	0	0	1
LTBP1	4052	hgsc.bcm.edu	37	2	33172879	33172879	+	Missense_Mutation	SNP	T	T	C	rs62135680		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	LTBP1-230	NM_206943	exon1	c.T488C	p.L163P	AGCAGCTGCAGGG	.	18	9	7	2	T|0.992;C|0.008	0	0	0	0	0
CCDC142	84865	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	74702509	74702509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	CCDC142-68	NM_032779	exon7	c.G1618A	p.E540K	CATACTCACTAGG	.	65	13	78	0	.	9	8	1	0	0
ALPPL2	251	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	233272617	233272617	+	Missense_Mutation	SNP	G	G	A	rs145892470		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	ALPPL2-91	NM_031313	exon5	c.G538A	p.A180T	GCCTACGCCCACA	.	170	26	137	0	G|1.000;A|0.000	0	0	0	0	0
FAM65C	140876	bcgsc.ca	37	20	49219029	49219029	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	FAM65C-92	NM_080829	exon13	c.G1227T	p.E409D	GGGGTCCTCAGAG	.	132	8	87	0	.	1	1	0	0	0
DNAH1	25981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	52422876	52422876	+	Silent	SNP	C	C	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	DNAH1-67	NM_015512	exon59	c.C9418T	p.L3140L	GAGAACCTGCAGT	.	60	39	70	0	.	0	0	0	0	0
BEND4	389206	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	42146005	42146005	+	Missense_Mutation	SNP	C	C	T	rs200387125		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	BEND4-90	NM_001159547	exon3	c.G494A	p.R165Q	ATCATTCGACTCT	.	26	13	25	0	.	0	0	0	0	0
TMEM161B	153396	broad.mit.edu	37	5	87498782	87498782	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	TMEM161B-92	NM_153354	exon9	c.C911G	p.P304R	TACAAAGGGATAC	.	165	3	136	0	.	1	1	0	0	0
ANKS1A	23294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	35051232	35051232	+	Silent	SNP	C	C	A	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	ANKS1A-94	NM_015245	exon20	c.C2946A	p.I982I	CATCATCCTGTCC	.	108	72	116	0	.	12	2	10	0	0
AHI1	54806	hgsc.bcm.edu	37	6	135759585	135759585	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	AHI1-227	NM_001134832	exon14	c.A1964G	p.N655S	ATGATATTGAGGT	.	5	3	2	0	.	2	0	2	0	0
FZD1	8321	broad.mit.edu	37	7	90894984	90894984	+	Silent	SNP	G	G	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	FZD1-658	NM_003505	exon1	c.G789T	p.P263P	CTTCCCGGGGGGC	.	24	11	14	0	.	17	8	9	0	0
SLC26A3	1811	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	107415276	107415276	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	SLC26A3-94	NM_000111	exon16	c.A1719C	p.K573N	CAAAGCTTTGTTG	.	165	73	124	1	.	0	0	0	0	0
GSTK1	373156	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	142965268	142965268	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	GSTK1-90	NM_001143679	exon6	c.C790T	p.H264Y	CTGGCGCACCTGC	.	495	101	415	0	.	0	0	0	0	0
CDKN2A	1029	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	21971120	21971120	+	Nonsense_Mutation	SNP	G	G	A	rs121913388	bycluster	TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	CDKN2A-23992	NM_000077	exon2	c.C238T	p.R80X	CGGGTCGGGTGAG	.	38	26	40	0	.	11	0	11	0	0
PRRC2B	84726	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	134350415	134350415	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	PRRC2B-24	NM_013318	exon15	c.G2899C	p.G967R	GAGCTAGGGGAGG	.	12	6	19	0	.	23	4	18	0	1
OBP2B	29989	hgsc.bcm.edu	37	9	136083879	136083879	+	Missense_Mutation	SNP	C	C	G	rs28584111		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	OBP2B-68	NM_014581	exon2	c.G183C	p.K61N	TTCCAACTTCCCA	.	40	3	59	0	.	0	0	0	0	0
SLC6A14	11254	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	115573956	115573956	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	SLC6A14-133	NM_007231	exon4	c.G448A	p.E150K	CAAAGTGAACTAC	.	140	83	191	0	.	0	0	0	0	0
CROCC	9696	broad.mit.edu	37	1	17294710	17294710	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	CROCC-137	NM_014675	exon31	c.4873delA	p.K1625fs	ATCAGCAAGATGA	.	6	2	6	0	.	0	0	0	0	0
PTPRC	5788	broad.mit.edu;bcgsc.ca	37	1	198678927	198678927	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	PTPRC-295	NM_002838	exon11	c.1145delG	p.S382fs	ACGCAAGTAAAAT	.	214	23	132	0	.	0	0	0	0	0
POLR1B	84172	broad.mit.edu;bcgsc.ca	37	2	113308552	113308559	+	Frame_Shift_Del	DEL	CTTTCTTC	CTTTCTTC	-	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	CTTTCTTC	CTTTCTTC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	POLR1B-91	NM_019014	exon5	c.735_742del	p.245_248del	ACTGTTCTTTCTT	.	165	25	149	0	.	0	0	0	0	0
SLC51A	200931	broad.mit.edu	37	3	195955100	195955102	+	In_Frame_Del	DEL	CTG	CTG	-	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	CTG	CTG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	.	NM_152672	exon5	c.477_479del	p.159_160del	AGGCCCCTGCTGC	.	116	7	139	0	.	0	0	0	0	0
SAV1	60485	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	51132011	51132012	+	Nonsense_Mutation	INS	-	-	A	novel		TCGA-G7-6789-01A-11D-1961-08	TCGA-G7-6789-10A-01D-1962-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	73b0f7f3-54f1-4030-b2a9-89bb6b4e6d3e	e2d58fed-dc32-460b-aae1-c39d371dfca5	.	SAV1-658	NM_021818	exon2	c.421_422insT	p.D141_G142delinsX	.	.	63	35	78	0	.	0	0	0	0	0